AMCG00021360


Basic Information

Item Value
gene id AMCG00021360
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 15653744 ~ 15660257 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021360
atgaaacaattaaGTAGTATGGTCAGAGATGTGTGTGCTCACTCCTCACAGAGGCTGGTTCGCTCGGCAGCCCCCCCTGACCGGGCTCTCCTGGACCAGAGGGCAAGGAAGACCTTTGACCctgaggaaactctgacaggccGCAGGAAGCAGTTCATCGCCAGCCTGCGAGGATTCAGCAGCTTCTACAGCCACCTGCCAGAGGCGCTGTGCAGCCGTGAGTCTGCCGTGCAGAACGGCTCCCTCTGCTGGAACGGACAGGAAATCGCAGACAGATCTGGGCCCCTCCGCAGAGTGAAGTAG

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021360 True 303 mRNA 0.59 4 15653744 15660257

Neighbor

gene id symbol gene type direction distance location
AMCG00021358 NA coding upstream 8759 15634639 ~ 15644985 (+)
AMCG00021359 NA coding upstream 54028 15571550 ~ 15599716 (+)
AMCG00021354 LOC105026395,LOC107751966,LOC105912120,LOC107601099,LOC103357578,LOC100696750 coding upstream 100742 15547281 ~ 15553002 (+)
AMCG00021350 mospd1,LOC107601124,LOC107560686,LOC107744569 coding upstream 179242 15468503 ~ 15474502 (+)
AMCG00021346 NA coding upstream 273621 15353756 ~ 15380123 (+)
AMCG00021361 LOC106586057,LOC106612107,LOC105026369 coding downstream 80478 15740735 ~ 15752170 (+)
AMCG00021366 NA coding downstream 119732 15779989 ~ 15784971 (+)
AMCG00021365 LOC101469993,LOC103374067,LOC102309869 coding downstream 130480 15790737 ~ 15792149 (+)
AMCG00021363 NA coding downstream 167347 15827604 ~ 15834441 (+)
AMCG00021362 mbnl3,LOC107560839,LOC107661388,LOC107658075,LOC107751960,LOC107707252,LOC108444474 coding downstream 176269 15836526 ~ 15853658 (+)
G85497 NA non-coding upstream 77226 15575549 ~ 15576518 (+)
G85426 ddx26b,ints6l,LOC107658008 non-coding upstream 86918 15446311 ~ 15566826 (+)
G85455 NA non-coding upstream 90827 15561745 ~ 15562917 (+)
G85440 NA non-coding upstream 124072 15487242 ~ 15529672 (+)
G85412 NA non-coding upstream 243134 15405776 ~ 15410610 (+)
G85507 NA non-coding downstream 92825 15753082 ~ 15755432 (+)
G85552 NA non-coding downstream 260482 15920739 ~ 15922721 (+)
G85623 NA non-coding downstream 480266 16140523 ~ 16169886 (+)
G85674 NA non-coding downstream 629492 16289749 ~ 16292193 (+)
G85746 NA non-coding downstream 887400 16547657 ~ 16549345 (+)
AMCG00021349 mmgt1,tmm32,LOC107658091,LOC107560676,LOC102787804 other upstream 221380 15428477 ~ 15432364 (+)
AMCG00021292 NA other upstream 1580619 14069330 ~ 14073125 (+)
AMCG00021296 NA other upstream 1620187 14016133 ~ 14033557 (+)
AMCG00021267 timm8a,LOC107593201 other upstream 2216336 13435307 ~ 13437408 (+)
G84749 NA other upstream 3553037 12075345 ~ 12100707 (+)
AMCG00021373 ubl3b,LOC107658069,LOC107707244,LOC108432919,LOC101472018,LOC107092570,LOC105029324,LOC100692344,LOC103390851 other downstream 403242 16063499 ~ 16073621 (+)
G85764 LOC103366846,LOC106930986 other downstream 929924 16590181 ~ 16592973 (+)
G85787 NA other downstream 996387 16656644 ~ 16714038 (+)
G85869 NA other downstream 1337620 16997877 ~ 17004131 (+)
AMCG00021441 NA other downstream 1810068 17470325 ~ 17473396 (+)

Expression


Co-expression Network