AMCG00021685


Basic Information

Item Value
gene id AMCG00021685
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 25384796 ~ 25406102 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021685
ATGTCGGATGAGGATTCGAGGGCCAGCACCAGTTCTTCatcttcctcatcctcctccactCAGCatcaaaaagagagagagagcagtagCAACACCACCACTACCACCATCACCATCAAGAAGAAGGAAAGCAAAGCCAGTATGAGCAAGACCTCCAAGCTGCTCTCCACCAGCGCCAAGAGGATCCAGAAGGAGCTGGCGGACATCACTCTGGACCCGCCGCCGAACTGCAGTGCTGGCCCTAAAGGAGACAACATCTATGAGTGGAGGTCGACGATCCTGGGTCCACCCGGCTCAGTGTACGAGGGAGGCGTCTTCTTCCTGGACATCGCGTTCACACCCGACTACCCTTTCAAACCCCCCAAGGTGACCTTCCGGACGAGAATCTACCACTGTAACATCAACAGCCAGGGGGTGATCTGCCTAGATATCCTAAAGGACAACTGGAGCCCAGCGCTAACCATCTCCAAGGTCCTGCTGTCCATCTGCTCCCTCCTCACAGACTGTAATCCTGATTTAGACCAGGTTCGCGTGTTTGTGCTCAGGACGCAGCTGGCTGCCTCAGCAGAGGGCCCGTCTGCCCGTCCCAGACGCAGGACTTGCCTAACCCAGCCCTgtgctgtttctgtgtttttgttcttcacaGCTGATCCACTCGTTGGAAGCATTGCAACTCAATACATGACCAACAGAGCCGAGCATGACAGAATAGCCAGACAGTGGACAAAGAGATATGCCACATAA

Function

GO: NA

KEGG:

id description
K20217 UBE2E; ubiquitin-conjugating enzyme E2 E

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021685 True 744 mRNA 0.54 6 25384796 25406102

Neighbor

gene id symbol gene type direction distance location
AMCG00021678 kat2b,LOC106588888,LOC106570503 coding upstream 377066 24987477 ~ 25007730 (+)
AMCG00021672 plcl2,LOC106605271,LOC106582018,LOC107688208 coding upstream 862521 24514118 ~ 24522275 (+)
AMCG00021671 NA coding upstream 927434 24444307 ~ 24457362 (+)
AMCG00021664 NA coding upstream 1007308 24371867 ~ 24377488 (+)
AMCG00021665 NA coding upstream 1031543 24342852 ~ 24353253 (+)
AMCG00021684 rpl15 coding downstream 6843 25412945 ~ 25415148 (+)
AMCG00021683 NA coding downstream 12718 25418820 ~ 25432607 (+)
AMCG00021688 NA coding downstream 186435 25592537 ~ 25615265 (+)
AMCG00021687 rarb,LOC107372434,LOC107700643,LOC107717720 coding downstream 226084 25632186 ~ 25678181 (+)
AMCG00021689 NA coding downstream 308482 25714584 ~ 25716586 (+)
G87525 NA non-coding upstream 1023887 24359504 ~ 24360909 (+)
G87482 NA non-coding upstream 1123179 24260962 ~ 24261617 (+)
G87464 fkbp14,LOC107685615,LOC107596753,LOC107743226,LOC107550815 non-coding upstream 1165972 24216374 ~ 24218824 (+)
G87423 LOC103376870 non-coding upstream 1245288 24080736 ~ 24139508 (+)
G87402 NA non-coding upstream 1352679 24029844 ~ 24032117 (+)
G87704 NA non-coding downstream 123222 25529324 ~ 25529585 (+)
G87765 NA non-coding downstream 426352 25832454 ~ 25832988 (+)
G87786 NA non-coding downstream 479344 25885446 ~ 25885703 (+)
G87824 NA non-coding downstream 685074 26091176 ~ 26094196 (+)
G87939 NA non-coding downstream 1304115 26710217 ~ 26713476 (+)
AMCG00021682 NA other upstream 12457 25276776 ~ 25372339 (+)
AMCG00021676 kcnh8,LOC106570508,LOC106941718 other upstream 435696 24909884 ~ 24949100 (+)
AMCG00021657 NA other upstream 1185969 24183208 ~ 24198827 (+)
AMCG00021656 NA other upstream 1206704 24174403 ~ 24178092 (+)
AMCG00021602 NA other upstream 2673652 22697164 ~ 22711144 (+)
AMCG00021692 NA other downstream 346255 25752357 ~ 25753253 (+)
AMCG00021693 NA other downstream 437592 25843694 ~ 25870195 (+)
AMCG00021703 galnt12 other downstream 745966 26152068 ~ 26197076 (+)
AMCG00021707 NA other downstream 1128991 26535093 ~ 26569148 (+)
AMCG00021745 NA other downstream 2226813 27632915 ~ 27637084 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location