Gene
RNA
| Item | Value |
|---|---|
| gene id | G87234 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 23197581 ~ 23197843 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU108898 | True | 263 | lncRNA | 0.49 | 1 | 23197581 | 23197843 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00021621 | tra2a,LOC107688335 | coding | downstream | 45260 | 23145357 ~ 23152321 (-) |
| AMCG00021622 | NA | coding | downstream | 70104 | 23127220 ~ 23127477 (-) |
| AMCG00021620 | igf2bp3,LOC108273237 | coding | downstream | 87830 | 23096480 ~ 23109751 (-) |
| AMCG00021614 | NA | coding | downstream | 129842 | 23061533 ~ 23067739 (-) |
| AMCG00021615 | fam126a,LOC107667581,LOC107570921 | coding | downstream | 148738 | 23026312 ~ 23048843 (-) |
| AMCG00021627 | NA | coding | upstream | 57096 | 23254939 ~ 23262180 (-) |
| AMCG00021629 | NA | coding | upstream | 67907 | 23265750 ~ 23303746 (-) |
| AMCG00021637 | NA | coding | upstream | 468750 | 23666593 ~ 23667210 (-) |
| AMCG00021635 | hoxa2aa,hoxa2,hoxa2b,LOC107685611,LOC107684556 | coding | upstream | 473582 | 23671425 ~ 23673576 (-) |
| AMCG00021636 | NA | coding | upstream | 479988 | 23677831 ~ 23685846 (-) |
| G87218 | NA | non-coding | downstream | 91393 | 23093588 ~ 23106188 (-) |
| G87203 | NA | non-coding | downstream | 106470 | 23089602 ~ 23091111 (-) |
| G87193 | NA | non-coding | downstream | 121566 | 23075634 ~ 23076015 (-) |
| G87181 | NA | non-coding | downstream | 182799 | 23007394 ~ 23014782 (-) |
| G87116 | NA | non-coding | downstream | 506692 | 22690608 ~ 22690889 (-) |
| G87269 | NA | non-coding | upstream | 173347 | 23371190 ~ 23372192 (-) |
| G87282 | NA | non-coding | upstream | 235373 | 23433216 ~ 23481900 (-) |
| G87287 | cbx3,LOC108425284,LOC105023664 | non-coding | upstream | 285129 | 23482972 ~ 23488212 (-) |
| G87427 | NA | non-coding | upstream | 879056 | 24076899 ~ 24077107 (-) |
| G87428 | LOC103376870 | non-coding | upstream | 882893 | 24080736 ~ 24133311 (-) |
| AMCG00021619 | NA | other | downstream | 36590 | 23155187 ~ 23160991 (-) |
| AMCG00021569 | NA | other | downstream | 1526266 | 21666402 ~ 21671315 (-) |
| G86808 | NA | other | downstream | 2114011 | 21063858 ~ 21083570 (-) |
| AMCG00021534 | bet1,LOC107669829,LOC107722155 | other | downstream | 2472701 | 20721884 ~ 20724880 (-) |
| G86649 | NA | other | downstream | 2799798 | 20395612 ~ 20397783 (-) |
| AMCG00021630 | NA | other | upstream | 131482 | 23329325 ~ 23332968 (-) |
| G87263 | NA | other | upstream | 140408 | 23338251 ~ 23338484 (-) |
| AMCG00021634 | NA | other | upstream | 297182 | 23495025 ~ 23498761 (-) |
| AMCG00021662 | NA | other | upstream | 1001693 | 24199536 ~ 24210205 (-) |
| AMCG00021668 | NA | other | upstream | 1145057 | 24342900 ~ 24363459 (-) |
