XLOC_006371


Basic Information

Item Value
gene id XLOC_006371
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 2899327 ~ 2908155 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013730
CAAGGCTGAAGGTTAATGCTTGTCCAGATACCCAAACCTGCCATCTTGGCCACTTGAGAGCATGTGCACACAACAAGAGCTTTGACGCTCCGGGCTGGATCTTCTGGTCAAACTGCTCCAGCGCGTCAGCCTGGACATCAGGGATCTGATTCATGATCAAGCGCAGCTCTGCGTATCGAGGTCTCtgtacacaaacaaaacaaaactatcaaGCGAAATATcctttttcaaatgatgtttcaTGGAGCAAAGctttttttgcattatatttcctacaatatttttcttctag

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013730 True 292 lncRNA 0.44 2 2899327 2908155

Neighbor

gene id symbol gene type direction distance location
XLOC_006370 BX571701.3 coding downstream 39916 2857461 ~ 2859411 (-)
XLOC_006369 BX571701.1 coding downstream 43055 2854325 ~ 2856272 (-)
XLOC_006368 BX571701.2 coding downstream 46249 2851139 ~ 2853078 (-)
XLOC_006367 cox20 coding downstream 378396 2515900 ~ 2520931 (-)
XLOC_006366 NA coding downstream 396151 2502083 ~ 2503176 (-)
XLOC_006372 NA coding upstream 11143 2919298 ~ 2924124 (-)
XLOC_006373 EML4 coding upstream 19482 2927637 ~ 2981472 (-)
XLOC_006374 LO018354.1 coding upstream 146668 3054823 ~ 3054937 (-)
XLOC_006375 pkdcca coding upstream 200909 3109064 ~ 3155244 (-)
XLOC_006376 AL935294.1 coding upstream 290283 3198438 ~ 3243258 (-)
XLOC_006338 rn7sk misc downstream 2073102 825904 ~ 826225 (-)
XLOC_006471 BX537274.2 misc upstream 7356586 10264741 ~ 10264905 (-)
XLOC_006364 NA non-coding downstream 548972 2348562 ~ 2350355 (-)
XLOC_006382 NA non-coding upstream 1051942 3960097 ~ 3961271 (-)
XLOC_006388 NA non-coding upstream 1497137 4405292 ~ 4407072 (-)

Expression


Co-expression Network