XLOC_006455 (pimr152)


Basic Information

Item Value
gene id XLOC_006455
gene name pimr152
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 9447020 ~ 9450210 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012531
TATAAAGCTTTTTGACGTAGCAGAAACTCTCAGTAGCTTCTTTGGATGtctagtagttcagtactttctgcgATTCAACAGTACAGTGATAAAATGGCATTTTCAAAACTGATTAATCGTCTGAAGAAAGCGTTTGGTGTTAAGTGTGCGAACGAACAACCGTGTGAGCCACTCGAACCCACCGGCAGCACGACAGAGAATCACCGTCATCTGATGACCGATGACCCGGCCGTCGCTGCAGGAAAACAGGCAGGGAGACAGAAAAAGAGGAAACTCAAATTGTCTCCCATCTTCTTCGCCTGTTTTTCCAGAAGAAGAGCTACTGTTGTTGATCAGCTATGTGTGCAGGAGATCCACGAACTTCACGCAGAGCCCATCAGTAGCTCTAAATTCTTCTGCACTGCTGTGAGCAACCTGGAGCTGGAAGTTCTCCAACCTCCAGCTCTTGATGCTCCAGCAGACGAAGATTTAGACTCTAAACCGGAAGTGAACAGCTTTGACTCTGCAGTGGTCATTGAGAACGACTCTGCAGAGCTTCACTTCCCAACAGACAACGAATCCTCCCTCAGTGAGGACAGCCTGGAGCAAGAGCTTGATAGTCCTCCAAGTTCACCATCCGATGAGGTCAATGAATCTCCAGTGAGCCAGCAGCTCATAACAGATGACATCTGTGACTCTGCCCTGGATGAAAACTCGAACCCTTCACCGGATCAGGTCTCACAAGAGGACTCTGCTGTGAAGTCTACAGCAGATGatgggacctgcttggacaataATGACATCAGCTGCCGCTACAAACTCGGAAAGCAGCTTGGTGAAGGAGGTTTCGGCTCCGTGTATGAGGGGATTCGCATACAGGATGGTCTGCAGGTGGCAGTTAAATTTGTCCAGAAGACCCCAAATATGCAAGATGTCAGCTCTtcatgtgaccaGCCACTTCCTCTAGAGATCACCTTGGCAAACATGGCCAGCGGTGGCTCCAGGTGTTCGAACATTATTCAGCTTCTGGACTGGCAGGTCTTTGAAAACCATTATGTCATGGTGATGGAGCGGCCTAGTCCAAGCATGGACCTGGAGGCATTCCTTGAAGTCAGCGGAGGAGTCCTCAGTGAGAAAACAGCACATACCATCATGAGGCAAGCTGTTTATGCGGCCAACGTGTGCTGTTACCGCGGGGTGTTCCACCGGGATATTAAGCTTCAAAACCTGCTGGTGAACCCCGACACACTGGAAGTCAAGCTGATCGACTTCGGGTGTGGAGACTTCATGATGGAATCAGCCTACAGTCTCTTCTCTGGCACAGAAGCGTACATCCCGCCAGAGTTTTATGAAAAAGGATGCTACCGGGCCAAACCAGCGACGGTCTATTCTCTTGGGGTTCTTCTGTTCACAATGCTCCATGGAGAATTCCCATCAGCGTATGACCTGTACTACCTCCAACATGACTGgtccaaatttaccctctctcaagAATGCTGTGATATGATGAGGGCTTGTCTGCATGAGAATCCAGAGTGCAGAATTCCTCTAGAAGAGATGCCTTACCACGACTGGTCCATGCTGGAGTTCTGAGTCACATTAGCagaatgttttgtatatttgatttttgtacatgtctgtaataaagatatattttattgAA

Function

symbol description
pimr152 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO:

id name namespace
GO:0043066 negative regulation of apoptotic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0007346 regulation of mitotic cell cycle biological_process
GO:0016310 phosphorylation biological_process
GO:0046777 protein autophosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081028-8 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

Ensembl:

ensembl_id ENSDARG00000109695

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012531 True 1642 mRNA 0.48 7 9447020 9450210

Neighbor

gene id symbol gene type direction distance location
XLOC_006454 grxcr1b coding downstream 4078 9440326 ~ 9442942 (-)
XLOC_006453 si:dkey-33c12.4 coding downstream 78485 9339919 ~ 9368535 (-)
XLOC_006452 BX901922.1 coding downstream 111129 9333317 ~ 9335891 (-)
XLOC_006451 si:dkey-33c12.3 coding downstream 128129 9313777 ~ 9318891 (-)
XLOC_006450 mrps26 coding downstream 135767 9303554 ~ 9311253 (-)
XLOC_006456 pimr152 coding upstream 14548 9464758 ~ 9467944 (-)
XLOC_006457 pimr152 coding upstream 42744 9492954 ~ 9496141 (-)
XLOC_006458 NA coding upstream 51557 9501767 ~ 9558425 (-)
XLOC_006459 pimr152 coding upstream 67606 9517816 ~ 9521005 (-)
XLOC_006460 CR848040.3 coding upstream 74172 9524382 ~ 9525527 (-)
XLOC_006338 rn7sk misc downstream 8620795 825904 ~ 826225 (-)
XLOC_006471 BX537274.2 misc upstream 814531 10264741 ~ 10264905 (-)
XLOC_006437 NA non-coding downstream 670543 8760694 ~ 8776477 (-)
XLOC_006435 BX004962.2 non-coding downstream 791573 8655119 ~ 8655447 (-)
XLOC_006434 BX004962.1 non-coding downstream 796969 8649711 ~ 8650051 (-)
XLOC_006428 NA non-coding downstream 1216855 8168713 ~ 8230165 (-)
XLOC_006426 NA non-coding downstream 1697819 7747111 ~ 7749201 (-)
XLOC_006467 NA non-coding upstream 627005 10077215 ~ 10118935 (-)
XLOC_006468 NA non-coding upstream 700709 10150919 ~ 10232078 (-)
XLOC_006469 NA non-coding upstream 799964 10250174 ~ 10253034 (-)
XLOC_006472 NA non-coding upstream 825076 10275286 ~ 10346890 (-)

Expression


Co-expression Network