XLOC_006469


Basic Information

Item Value
gene id XLOC_006469
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 10250174 ~ 10253034 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013464
CAGGTGAATGCCTAGTTATTCAGTCTCTTAGGCCACCTACTGGCCAAATTCGGGGAAAAGCTGATTTTTACACATTTGCTAGGAAACCAGCCTGATGAGAAAACCCATATCAAGCTAGTACAGAGAATTTAAAGAGGCTTGATCTAAAATAAAAGACACCCAAGTTGTTCCGAACTCTAAaaggaacttttttttattattatgattgtttataCCCCATACTTTGGCCCAGAGTGAAGGTGCAAATAACAGGATAGCAGTGCTATAAAGGAAACCATatcatttatACTGTGAAGCTGTCAGGTCTGGGGTGGAATATTTGCTTCAGCCGTTCAAACAGTGGCTTGCTCTTTGCTCCAAAAAGTGTCATTGGCTACCAAAACATTGAAAAATATAat

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013464 True 398 lncRNA 0.39 2 10250174 10253034

Neighbor

gene id symbol gene type direction distance location
XLOC_006468 NA coding downstream 18096 10150919 ~ 10232078 (-)
XLOC_006467 NA coding downstream 131239 10077215 ~ 10118935 (-)
XLOC_006466 si:ch211-117n7.6 coding downstream 354546 9889676 ~ 9895628 (-)
XLOC_006465 si:ch211-117n7.7 coding downstream 363595 9878544 ~ 9886579 (-)
XLOC_006464 tm9sf3 coding downstream 374636 9855380 ~ 9875538 (-)
XLOC_006470 six3a coding upstream 4973 10258007 ~ 10261383 (-)
XLOC_006472 NA coding upstream 22252 10275286 ~ 10346890 (-)
XLOC_006473 camkmt coding upstream 107410 10360444 ~ 10620794 (-)
XLOC_006474 slc3a1 coding upstream 396035 10649069 ~ 10672538 (-)
XLOC_006475 ppm1ba coding upstream 429393 10682427 ~ 10731325 (-)
XLOC_006338 rn7sk misc downstream 9423949 825904 ~ 826225 (-)
XLOC_006471 BX537274.2 misc upstream 11707 10264741 ~ 10264905 (-)
XLOC_006458 NA non-coding downstream 691749 9501767 ~ 9558425 (-)
XLOC_006437 NA non-coding downstream 1473697 8760694 ~ 8776477 (-)
XLOC_006435 BX004962.2 non-coding downstream 1594727 8655119 ~ 8655447 (-)
XLOC_006476 AL928999.1 non-coding upstream 659452 10912486 ~ 10912602 (-)
XLOC_006480 NA non-coding upstream 1189804 11442838 ~ 11445780 (-)
XLOC_006482 CR556710.1 non-coding upstream 1312702 11565736 ~ 11565863 (-)
XLOC_006492 CR792443.2 non-coding upstream 1721418 11974452 ~ 11974568 (-)

Expression


Co-expression Network