XLOC_006494 (oga)


Basic Information

Item Value
gene id XLOC_006494
gene name oga
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 11988464 ~ 12006007 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012592
ATGGTTCAGAAAGACAAAATAATCGAGTCGTCGCAGCCAGAGGTTGAAGTTATTCCAGTGCCAGTGGAAGCGGTTGCAGATACCCAGTGTCCAGTTGACGAGCCCACCATCGAGATTGAGCGAACAGGCCGCAGGAAATTCATCACCGGTGTTGTGGAGGGCTTCTATGGACGGCCATGGACTATGGAACAAAGGAAAGAGCTTTTCAGGAGGCAGCAGAAATGGGGCTTGAACACATATTTGTATGCCCCAAAAGATGACTACAAACACAGAATGTTTTGGAGAGAAATGTATTCTGTTGAGGAAGCAGagcaactCACAACTTTGATAAGTGCTGCTAAAGAGTATGGGATTGAGTTCATTTATGCCATTTCTCCGGGCCTGGACATTACTTTCTCAAATCAAAAGGAAGTGTCGACACTTAAAAGGAAATTAGACCAGGTCACTCATTTTGGGTGCAAGTCCTTTGCCTTACTGTTTGACGACATTGATCATAACATGTGTCCGGCTGACAAGGAGGTATTCAGCTCTTTTGCACATGCCCAAGTCTCTGTCACCAATGAGATCTTCCAATATTTGGGAGAAcctgaaatatttttgttttgcccCACAGAGTATTGTGGAACATTTTGTTATCCAAATGTGTCACAATCGCCTTACCTGCGCACAATAGGTGAAAAGCTACTTCCTGGTATTGAGGTGTTATGGACAGGTCCCAAAGTAGTATCTAAAGACATAACCGTTGAATCAATTGAAGAAGTCACAAAGATACTAAGGAGAGCTCCTGTAATCTGGGACAACATCCATGCTAATGACTATGATCAAAAGAGACTTTTCTTGGGACCTTATAAAGGCCGGTCTACAGAACTCATTCCTCGGCTAAAAGGAGTCCTTACCAACCCCAACTGTGAATTTGAGTCTAATTTTGTGGCTATTCACACGTTAGCCACATGGTATAAGTCTAACATGAATGGAGTGAGGAAAGATGTGGTCATGACTGACAGTGAAGACAGCACTGTGTCCATCCAGATAAAGCTGGAAAACGAGGGCAGTGATGAGGAGCTAGAAACTGATATCCTCTACAGCCCACAGATTGCACTCAAGCTAGCTCTCACTGAATGGCTGAGCGAGTTTGGCGTCCCTCATCAGTACAACAGCCGGCAAGTGCCTCACAGTGGAACAAAAAGCACTACTATGGATGTTCCCACTCTTGCTGCATCCACCCTGGTCACTTCCACTACAGTGACCACAGTCTTCCAACAGCCCATCATGAGTCCGGTTTTGCCCCTTTCTGATGAACCACATGTGCTTggcaaagaagaagaagaggaggtggAGAAGAAGGAGTCTGATGAAGAACCCATGGAGATGGTCGTGGAGAAACACGACGAGGTGGAGGACACCAAAAATGTCAACCAGATTCTAACAGAGATCGTCAAAGCCAAGATGACGGAAGATCTCAAACCTATGGACACTGATAAAGAGAGCCTGACAGAGTCCAAATCACCAGAAATGTCCATTCAAGAGGATTCAGGCAGTGATATTGCACCGATGCAAACAGATGATCAGCTCAATAAGGAAGTGTTTGTTCCTGGCCCCAACGAGAAACCACTCTTCATTACCGAGGCACTTACTCTGGAGGATCTGACGCTGCTGGCTGAACTTTTCTACCTGCCTTACGAACATGGTCCAAAATCAGTACAGATGCTGAAAGAGTTTAACTGGTTGAGAGCCAATAGCAATTATGTTAGTGTCAACTCCAAAGCAAAGGATCCAGAGAAGGTAACTGAGTGGCAATCCAGAGCTGAAAACTTTGAGGAGATGTGCTGCTCTGTCATGCAGATGTTCACCAGACTCTCAAACTCCGCCAACAGGACCATTCTTTATGACCTGTATCCCTATATCTGGGATATAAAGAGTATCATCTCAATGGTGAAATCATTTGTTCAGTGGTTAGATGGAAGAATCCTCGGCACAAGTTTCTACTGCTATTGGACGGACAGTGCCCGATGGTGTCGTAGTCAGTCGTCAGCACAGTTCTTAAGTGGCGACCAAGAGCCCTGGGCCTTTAGGGGCGGTCTAGCAGGAGAGTTCCAGAGACTGTTGCCAATTGATGGAGCAAACGATCTTTTCTACCAGCCACCGCCATCAATGCCAACTTCCAAAATCTATACCATAAGGCCTTACTTTGCCAAAGATGAGTCTGCCATCTATAAGATCTGCAAGGAGATGTTCACTGAGAGCTGTGAGGGCATTTCTTTCTCAGATGAATCACCGGACCTTATTGGAGACAGGTTAGTGGGAGGTTTCCTGACACTCAGTCCAGACTATGGCTTTGTGCTTGAGGATGAGGAAGGTGTGTGTGGCTATGCTATGGGCACTGTGGATGTCAAGCCTTTCGTGAAGAAATGTAAGCTTAGTTGGATTCCGTTCATGCAGGAGAAATACATCAAGCCAGACGCAGAGAAGGACCTTTCAGAGGCTGAGAAAATGATGCTGAGTTTTCATGAGGAAGAAGACGGTTTGCCAGAATCATTCCTCAGGAACTTCCCATCACTCATAAAAGTAGATATTCACGCAAAGGTCACTGACCCCAGTGTTGCCAAAAGCATGATGGGTTGTCTTCTCTCATCACTGAAAGCTAATGGCTCACATGGTGCTTTCTGTGAGGTCCGGCAGATTGACAAAAGGATGTTGGACTTTTATAGCAAACTGGGCTGCTTTGAAGTGGCCAAGATGGAGGGATTTCCAAAAGACATTATTATTATGGGGAGGAGTTTGTGAATCTGAGCCCcccctacaaaaaaaaacaaaagcatacaGAAGGAGCCTCTTAGAAAATGCACAAAGCTTTGGCCCCAACTTGCTACCTGTTCATGTAAATCTCATGTTTTGTAATCTCAGCCATCACTTGTTTAGGCCTGTAAAGGTAGCCTGATTCACATCATTACGTCCAGTGCACTTCTAGAGTTTTAGCTGCTGTTGATTCACTTTGCCAGATTGCCGTGGATGCTCAGAGTTTGAAAGTGAgaatggaaaaagaattgaagTGAGTCTGCAAGAGTAATTCGGAGCGCATGATTTACTCTGACTGTTTTCCGGTGGATTGCTTGAGTTGGCCGAGTGCCACCGAACCCACTTAAATCTCTTAGATGTGACCCAGTTGCGGTTAGCGTTATGTGCATGTTTAGGTTAACATCTAGATTCTCCTGACTAAAAGTTTACCATTACTTGATAAGAGCCGTCAACACCCTACTGTTCCTAATTGTTAATTTCAGTACTTCTACAGTGTTCGAAGCAATAATCTAGACTTCACGGCGGTCAGGTTTTGTTATTGCTTTCCCGGACGTTGTAATAAATTCTGCAGTTTTCCAGGTTCAAACGGTGTCGGTGGGCTCATACGGGGAATACGGCAGGCTAAAGCTGTCCTTTGAGATTTGggtgttctttaaaaaaagaaaagaaaacagaagCTGAACTTTCTGTGCTGAGCAGGCAGGAGTCAGTGGAGTCGAACCATACACATTCATTGATTTAAGACTGCATGGGATGCTTTTGTGTCAGCCTTTAGCATGGGTATCTTTTAACGATACGTTTTGTTGTTTTGTACAAAAAATGCTTTATGGCTCTTGCCCTTCTATGTAATATATGTGAGGGTAATGACGAGTACTTTTGCACACTTCTGCCTTTGTTTTAGTGGTGAGTTATACAATTCTGAGGCGTAACAGGGTTGCATTAGGATTGTGAGATGCTGATGTGTTGTTTACGAAAAGAACTTTTTGTTTTATCTTAACCCTGAAGACCAATGCCCTGCACAATTTCTCTAATTCGAGAGAAATCTAAAACTTAATGAAGGTACATTCATGGATTATCTTTGGAATACCCAATGTCCTTTTTTTCTGATGCCTAAAGACCACAACACCATTGCTTGTTTATTATGAGTGTCAGCttgtgaatatatttaaaagCCCCGCAGTTTGAAGCAGTGTTTTTTTCCTGAAGGCCACTATATAAACGTGACAtcaggatttttttcttttacttagaTGCAATGCAGACGGTTTATTCTGTTTTCCCTTTTTAAaccttaacttttttttgtaaaatatctaTCATCGTGCTGTATCCTCAAACAAAACATCAAACTAGATTAGCACAAAAGCCTCCTGCAGATTTCCATATGTAATGTTTTTGAAATAATGcgtgggatttaaaaaaaaaaaaaaaaaactataatcatTTTGTGCATGTGGCAGGTCAACCGTTTTGACCTTTTGTCACATTTTCCCAGCCCTGTTTAAGAGATATTTGTACTCCAAAATTGCTTATTGTTTATTCCTAATGGCTTATTGctcaagtcatttgattttggtTATTCACATCCAAGTGTAAAGGgcttttgtttcttctttttttaaaggtcATACAATGCATTTGTTTAAAGAGTTGAAGACCTTTCTGTACTTTGATGTAATTATGattatgtatatgtaatataGTTGTAATTTCTGTAAGGGTTGTATGTAAGTAAGAtggttattaaaatgttacatagAAAATCACCTGTGATCTTTGAGTCATGTGCAAAATGCTTTCTGGGGGAGGTtctaccagaaacatacattttcacttaGAAAAATGTATCTGGGCCTGACTTTTAAGCTTTTTCTTTAAACATCATAcaaaaataagcataaaatcatacataTTAAATGATTCAACGCATTCTTAATCACTGGTAGCTTCTTTTTTATGCATATAGTGAGAATATACAATCACAGtattataaagaaaatgaaaaaaaatgttgaaatcaagacaaaaacagaaggggTATATACACATCACACAATAAAgtttatattcataaaaaatatatcatttacaaATTTCAGTggttttaaggctttttttttttttagtaaaactgcatttttg
>TCONS_00012593
CCCCTTTAAGAGGCAGGCTAGAGATTTGTTTTCAGACTCGCACAAACCGTCCGTTACTGGCTCAAACCAGTTTCCTGAGCCTGCGCAGTAAGTGTAAACAGGAAGAAGAGTGCAAAATTAAACACTGTCGATGAACGCGGCGTTACGCAGACAATCTCTTTTTGAAGACGCGAAGCATGTGTACAGTAAGATGCTTGGTTAAATCATAAATGTATTTTCCGCACATGATGTGACGTGACTGAACTAAAGCGAAAAGAGAAAAAGCGGGTTATGCTAACGTTAACTGGCGGTACAGACTAACGCATCGTTAAAAGACAGATCGCAAACGGACTACATACAGTCCAGAAAGAAATCAGTATTGTACGCGAATGACTGTTGTGATAAAAAACGAAAACATCTGCAGTTGGTTCATGCAGATCGTTTCAGTTTCATCCGACTGAATTTCCACCTACCGGTGACTCAATGGCCTACTAACCCAGAAACTGAATTGGGTGAAGAGTCTGTTTTCCTGCGGAAGAAAAGCGTTGGCTGATTACAAATCTGATATCTACGACAACTGTTATTAGGAACGATTCAATATGGTTCAGAAAGACAAAATAATCGAGTCGTCGCAGCCAGAGGTTGAAGTTATTCCAGTGCCAGTGGAAGCGGTTGCAGATACCCAGTGTCCAGTTGACGAGCCCACCATCGAGATTGAGCGAACAGGCCGCAGGAAATTCATCACCGGTGTTGTGGAGGGCTTCTATGGACGGCCATGGACTATGGAACAAAGGAAAGAGCTTTTCAGGAGGCAGCAGAAATGGGGCTTGAACACATATTTGTATGCCCCAAAAGATGACTACAAACACAGAATGTTTTGGAGAGAAATGTATTCTGTTGAGGAAGCAGagcaactCACAACTTTGATAAGTGCTGCTAAAGAGTATGGGATTGAGTTCATTTATGCCATTTCTCCGGGCCTGGACATTACTTTCTCAAATCAAAAGGAAGTGTCGACACTTAAAAGGAAATTAGACCAGGTCACTCATTTTGGGTGCAAGTCCTTTGCCTTACTGTTTGACGACATTGATCATAACATGTGTCCGGCTGACAAGGAGGTATTCAGCTCTTTTGCACATGCCCAAGTCTCTGTCACCAATGAGATCTTCCAATATTTGGGAGAAcctgaaatatttttgttttgcccCACAGAGTATTGTGGAACATTTTGTTATCCAAATGTGTCACAATCGCCTTACCTGCGCACAATAGGTGAAAAGCTACTTCCTGGTATTGAGGTGTTATGGACAGGTCCCAAAGTAGTATCTAAAGACATAACCGTTGAATCAATTGAAGAAGTCACAAAGATACTAAGGAGAGCTCCTGTAATCTGGGACAACATCCATGCTAATGACTATGATCAAAAGAGACTTTTCTTGGGACCTTATAAAGGCCGGTCTACAGAACTCATTCCTCGGCTAAAAGGAGTCCTTACCAACCCCAACTGTGAATTTGAGTCTAATTTTGTGGCTATTCACACGTTAGCCACATGGTATAAGTCTAACATGAATGGAGTGAGGAAAGATGTGGTCATGACTGACAGTGAAGACAGCACTGTGTCCATCCAGATAAAGCTGGAAAACGAGGGCAGTGATGAGGAGCTAGAAACTGATATCCTCTACAGCCCACAGATTGCACTCAAGCTAGCTCTCACTGAATGGCTGAGCGAGTTTGGCGTCCCTCATCAGTACAACAGCCGGCAAGTGCCTCACAGTGGAACAAAAAGCACTACTATGGATGTTCCCACTCTTGCTGCATCCACCCTGGTCACTTCCACTACAGTGACCACAGTCTTCCAACAGCCCATCATGAGTCCGGTTTTGCCCCTTTCTGATGAACCACATGTGCTTggcaaagaagaagaagaggaggtggAGAAGAAGGAGTCTGATGAAGAACCCATGGAGATGGTCGTGGAGAAACACGACGAGGTGGAGGACACCAAAAATGTCAACCAGATTCTAACAGAGATCGTCAAAGCCAAGATGACGGAAGATCTCAAACCTATGGACACTGATAAAGAGAGCCTGACAGAGTCCAAATCACCAGAAATGTCCATTCAAGAGGATTCAGGCAGTGATATTGCACCGATGCAAACAGATGATCAGCTCAATAAGGAAGTGTTTGTTCCTGGCCCCAACGAGAAACCACTCTTCATTACCGAGGCACTTACTCTGGAGGATCTGACGCTGCTGGCTGAACTTTTCTACCTGCCTTACGAACATGGTCCAAAATCAGTACAGATGCTGAAAGAGTTTAACTGGTTGAGAGCCAATAGCAATTATGTTAGTGTCAACTCCAAAGCAAAGGATCCAGAGAAGGTAACTGAGTGGCAATCCAGAGCTGAAAACTTTGAGGAGATGTGCTGCTCTGTCATGCAGATGTTCACCAGACTCTCAAACTCCGCCAACAGGACCATTCTTTATGACCTGTATCCCTATATCTGGGATATAAAGAGTATCATCTCAATGGTGAAATCATTTGTTCAGTGGTTAGGGTGTCGTAGTCAGTCGTCAGCACAGTTCTTAAGTGGCGACCAAGAGCCCTGGGCCTTTAGGGGCGGTCTAGCAGGAGAGTTCCAGAGACTGTTGCCAATTGATGGAGCAAACGATCTTTTCTACCAGCCACCGCCATCAATGCCAACTTCCAAAATCTATACCATAAGGCCTTACTTTGCCAAAGATGAGTCTGCCATCTATAAGATCTGCAAGGAGATGTTCACTGAGAGCTGTGAGGGCATTTCTTTCTCAGATGAATCACCGGACCTTATTGGAGACAGGTTAGTGGGAGGTTTCCTGACACTCAGTCCAGACTATGGCTTTGTGCTTGAGGATGAGGAAGGTGTGTGTGGCTATGCTATGGGCACTGTGGATGTCAAGCCTTTCGTGAAGAAATGTAAGCTTAGTTGGATTCCGTTCATGCAGGAGAAATACATCAAGCCAGACGCAGAGAAGGACCTTTCAGAGGCTGAGAAAATGATGCTGAGTTTTCATGAGGAAGAAGACGGTTTGCCAGAATCATTCCTCAGGAACTTCCCATCACTCATAAAAGTAGATATTCACGCAAAGGTCACTGACCCCAGTGTTGCCAAAAGCATGATGGGTTGTCTTCTCTCATCACTGAAAGCTAATGGCTCACATGGTGCTTTCTGTGAGGTCCGGCAGATTGACAAAAGGATGTTGGACTTTTATAGCAAACTGGGCTGCTTTGAAGTGGCCAAGATGGAGGGATTTCCAAAAGACATTATTATTATGGGGAGGAGTTTGTGAATCTGAGCCCcccctacaaaaaaaaacaaaagcatacaGAAGGAGCCTCTTAGAAAATGCACAAAGCTTTGGCCCCAACTTGCTACCTGTTCATGTAAATCTCATGTTTTGTAATCTCAGCCATCACTTGTTTAGGCCTGTAAAGGTAGCCTGATTCACATCATTACGTCCAGTGCACTTCTAGAGTTTTAGCTGCTGTTGATTCACTTTGCCAGATTGCCGTGGATGCTCAGAGTTTGAAAGTGAgaatggaaaaagaattgaagTGAGTCTGCAAGAGTAATTCGGAGCGCATGATTTACTCTGACTGTTTTCCGGTGGATTGCTTGAGTTGGCCGAGTGCCACCGAACCCACTTAAATCTCTTAGATGTGACCCAGTTGCGGTTAGCGTTATGTGCATGTTTAGGTTAACATCTAGATTCTCCTGACTAAAAGTTTACCATTACTTGATAAGAGCCGTCAACACCCTACTGTTCCTAATTGTTAATTTCAGTACTTCTACAGTGTTCGAAGCAATAATCTAGACTTCACGGCGGTCAGGTTTTGTTATTGCTTTCCCGGACGTTGTAATAAATTCTGCAGTTTTCCAGGTTCAAACGGTGTCGGTGGGCTCATACGGGGAATACGGCAGGCTAAAGCTGTCCTTTGAGATTTGggtgttctttaaaaaaagaaaagaaaacagaagCTGAACTTTCTGTGCTGAGCAGGCAGGAGTCAGTGGAGTCGAACCATACACATTCATTGATTTAAGACTGCATGGGATGCTTTTGTGTCAGCCTTTAGCATGGGTATCTTTTAACGATACGTTTTGTTGTTTTGTACAAAAAATGCTTTATGGCTCTTGCCCTTCTATGTAATATATGTGAGGGTAATGACGAGTACTTTTGCACACTTCTGCCTTTGTTTTAGTGGTGAGTTATACAATTCTGAGGCGTAACAGGGTTGCATTAGGATTGTGAGATGCTGATGTGTTGTTTACGAAAAGAACTTTTTGTTTTATCTTAACCCTGAAGACCAATGCCCTGCACAATTTCTCTAATTCGAGAGAAATCTAAAACTTAATGAAGGTACATTCATGGATTATCTTTGGAATACCCAATGTCCTTTTTTTCTGATGCCTAAAGACCACAACACCATTGCTTGTTTATTATGAGTGTCAGCttgtgaatatatttaaaagCCCCGCAGTTTGAAGCAGTGTTTTTTTCCTGAAGGCCACTATATAAACGTGACAtcaggatttttttcttttacttagaTGCAATGCAGACGGTTTATTCTGTTTTCCCTTTTTAAaccttaacttttttttgtaaaatatctaTCATCGTGCTGTATCCTCAAACAAAACATCAAACTAGATTAGCACAAAAGCCTCCTGCAGATTTCCATATGTAATGTTTTTGAAATAATGcgtgggatttaaaaaaaaaaaaaaaaaactataatcatTTTGTGCATGTGGCAGGTCAACCGTTTTGACCTTTTGTCACATTTTCCCAGCCCTGTTTAAGAGATATTTGTACTCCAAAATTGCTTATTGTTTATTCCTAATGGCTTATTGctcaagtcatttgattttggtTATTCACATCCAAGTGTAAAGGgcttttgtttcttctttttttaaaggtcATACAATGCATTTGTTTAAAGAGTTGAAGACCTTTCTGTACTTTGATGTAATTATGattatgtatatgtaatataGTTGTAATTTCTGTAAGGGTTGTATGTAAGTAAGAtggttattaaaatgttacatagAAAATCACCTGTGA

Function

symbol description
oga Predicted to enable beta-N-acetylglucosaminidase activity. Predicted to be involved in glycoprotein metabolic process. Orthologous to human OGA (O-GlcNAcase).

GO:

id name namespace
GO:0009100 glycoprotein metabolic process biological_process
GO:0016231 beta-N-acetylglucosaminidase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-3208 Predicted to enable beta-N-acetylglucosaminidase activity. Predicted to be involved in glycoprotein metabolic process. Orthologous to human OGA (O-GlcNAcase).

Ensembl:

ensembl_id ENSDARG00000074686

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012592 False 4938 mRNA 0.41 17 11988464 12005429
TCONS_00012593 True 5093 mRNA 0.42 16 11988833 12006007

Neighbor

gene id symbol gene type direction distance location
XLOC_006493 npm3 coding downstream 1710 11975954 ~ 11986754 (-)
XLOC_006492 CR792443.2 coding downstream 13896 11974452 ~ 11974568 (-)
XLOC_006491 arl3a coding downstream 17303 11963789 ~ 11971161 (-)
XLOC_006490 zmp:0000000662 coding downstream 188183 11767603 ~ 11800281 (-)
XLOC_006489 ube2d3 coding downstream 225273 11746412 ~ 11763191 (-)
XLOC_006495 pprc1 coding upstream 1897 12007904 ~ 12021566 (-)
XLOC_006496 CR792443.1 coding upstream 99771 12105778 ~ 12105894 (-)
XLOC_006497 NA coding upstream 111106 12117113 ~ 12118250 (-)
XLOC_006498 commd8 coding upstream 372067 12378074 ~ 12389748 (-)
XLOC_006499 lamtor3 coding upstream 473257 12479264 ~ 12486076 (-)
XLOC_006471 BX537274.2 misc downstream 1723559 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 11162239 825904 ~ 826225 (-)
XLOC_006482 CR556710.1 non-coding downstream 422601 11565736 ~ 11565863 (-)
XLOC_006480 NA non-coding downstream 542684 11442838 ~ 11445780 (-)
XLOC_006476 AL928999.1 non-coding downstream 1075862 10912486 ~ 10912602 (-)
XLOC_006472 NA non-coding downstream 1641574 10275286 ~ 10346890 (-)
XLOC_006502 NA non-coding upstream 580990 12586997 ~ 12587412 (-)
XLOC_006507 NA non-coding upstream 742645 12748652 ~ 12756661 (-)
XLOC_006510 NA non-coding upstream 1581289 13587296 ~ 13590570 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01180000_03512441_03530828 MGEA5 coding CI01180000 null 3511851 ~ 3530828 (-)
bowfin (Amia calva) AMCG00003206 mgea5,LOC107666422,LOC107667060,LOC107585241 coding CM030139.1 CM030139.1 14499293 ~ 14512805 (-)