CI01000000_03724666_03729920 (MCHR2)


Basic Information

Item Value
gene id CI01000000_03724666_03729920
gene name MCHR2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 3724100 ~ 3730043 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_03724666_03729920.mRNA
TTATAAAATGTATAGGTAAAATCACTTTGAATAAAAGCAGCTGCCAATATTGCAAATGTAAATGATTAAACTATAAGATCTAATAAGACGTGCATGCAACAGGTTCACAAAGTTCATAATAGTGTATAAAGAAATTCATTGTGACCACTGGAGTTTGCTCTTGCTGTTAAGGACTGTGCATAAAAGAGTCATCAAATAATTTTCTATATTGAGTGTGATGGGTGAGCTTGGAGAGAGGGCTCTAAAAGGGTGGAGACACGCGCATCTCTTCAAACAGCTACTGGAAGAGACAGACGCGCGTAATACGCACAGAAGCTCCTGCTTAGGGGCACTTATATGCACTAAAACAATATCTCAAAAGACTGAGGCATCGGCGAACTGAATGAAAAACAAAGCAGATGAAAACGGGACGACAACTGACACCCGAGGGAGACTTTTTACAACTTTAAACGGTTTGAATATGAAGTAGGGCTCTGCGTAAAAGCTTGCGTAATCGTGTGCAGACCAGACTAAGACTACAAATTTTCATATTTATTTATTCTTTTTTAAGCAAAAAGTTTTGTAAGATGAACACCTCAGATATTTTTTGCGATTCCGAATTTGCAAATTCTTCCAACTTTTCGTGTGTGAACCGAACCGTCCCGTCGTACAGCATCATTGACATCGCGTCTTTCATGCACATATTCCCCACTATCTACGGCATCCTGTGTTCAGTTGGAGTTCTGGCCAACAGTTTGGTCATCTATGCTGTGGCAGCATGCAAGAAGAAGATGGTCTCTGATATTTACGTTCTGAATCTGGCCATTGCAGACCTGCTGTTCTTGTTGGTGATGCCGTTCAACATCCATCAGTTGGTCAGGGACAGACAGTGGGTCTTTGGGCACTTCATGTGTAAAGCTGTGGTGGTGGTGGACGTCAGTAACCAGTTTACCACAGTGGGGATAGTGACTGTGCTCTGCATTGACAGGTACGTTGCAATTGTACATCCTACATCTGAAAAGAGAACCATTCAGTGGACCATCGTCATCAACATTATGGTGTGGGTGGGCAGCTTCCTTCTGAGCATCCCAGTCATGATATATGCTAAAGTCATCTCCAAAAAGAACATGGACATCTGTATGATTAACCTGGATGGGCCACAAGATATGTACTGGTACACGCTCTACCAGTCCATGCTGGGTTTCATTGTCCCCCTGATTATAATTAGTACATTTTACACTCTCACTTTGTACCACGTGTTCCGCTCCATCCGGCGGGTCAAACGCAAGCAGTCAGTGTGGGCCAAACGGGCCACTAAGACAGTTCTGATGGTGATCGGCCTATTCCTGGTCTGCTGGTCTCCCTACCACGTCATCCAGGTGATCAACCTTAGCATCTATCAGCCCACCACCGCCTTTGTGTACGCGTACAACATCAGCATCTGCTTAAGTTACTCTCACAGCTGCATCAACCCCCTCATGCTGCTGATATTCGCCCAGAACTACCGCGATCGCCTCTGCCATCGCAAAGAGCTACGGTCCCAGATCAGCTCATCCAAGACCACCGTCAAAACCGACGGAGGGTCTAGCGTCAGCCCGGACACCAGTCACCGTTGCACTGTCATCTAACGCCCGCCGAACTTTGCCCGATGTGCTACCTGAGGAAAACTTCAAGAAGGCCTGTAATGCAACACTTGCTGCACGGGTGTCAGTTGCACTGTAGACTGTTTCTCAAAGGGGAAAACTGTGAAA

Function

symbol description
mchr2 Predicted to enable G protein-coupled peptide receptor activity. Predicted to be involved in neuropeptide signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of plasma membrane.

NR:

description
melanin-concentrating hormone receptor 2, partial

GO:

id name namespace
GO:0007218 neuropeptide signaling pathway biological_process

KEGG:

id description
K05054 MCHR2; melanin-concentrating hormone receptor 2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_03724666_03729920.mRNA True 1730 mRNA 0.46 2 3724100 3730043

Neighbor

gene id symbol gene type direction distance location
CI01000000_03630643_03637287 LRRTM2 coding upstream 86024 3630591 ~ 3638076 (+)
CI01000000_03232984_03233709 NA coding upstream 490111 3232984 ~ 3233989 (+)
CI01000000_03220166_03232503 NA coding upstream 491597 3220166 ~ 3232503 (+)
CI01000000_03184726_03189468 FAF2 coding upstream 534632 3184680 ~ 3189468 (+)
CI01000000_03178021_03180730 NA coding upstream 543288 3178021 ~ 3180812 (+)
CI01000000_03864153_03869858 NA coding downstream 134110 3864137 ~ 3870246 (+)
CI01000000_03919871_03926839 NA coding downstream 188191 3918234 ~ 3926911 (+)
CI01000000_03930421_03932454 NA coding downstream 200378 3930421 ~ 3933213 (+)
CI01000000_03962507_03966711 N4BP3 coding downstream 232268 3962311 ~ 3966796 (+)
CI01000000_04019072_04022985 PPP2CA.L, PP2AA, PPP2CB, PPP2CA coding downstream 289029 4019072 ~ 4023055 (+)
G2283 NA non-coding upstream 24733 3699104 ~ 3699367 (+)
G2204 NA non-coding upstream 35911 3664849 ~ 3688189 (+)
G2223 NA non-coding upstream 143875 3579993 ~ 3580225 (+)
G2206 NA non-coding upstream 203216 3520682 ~ 3520884 (+)
G2205 NA non-coding upstream 204042 3519706 ~ 3520058 (+)
G2319 NA non-coding downstream 11665 3741708 ~ 3741934 (+)
G2320 NA non-coding downstream 14530 3744573 ~ 3744823 (+)
G2337 NA non-coding downstream 73243 3803286 ~ 3803749 (+)
G2342 NA non-coding downstream 82899 3812942 ~ 3813197 (+)
G2351 NA non-coding downstream 92084 3822127 ~ 3822366 (+)
G579 NA other upstream 1815292 1767917 ~ 1908808 (+)
G435 NA other upstream 2291246 1425121 ~ 1432854 (+)
G350 NA other upstream 3047163 671842 ~ 676937 (+)
G252 NA other upstream 3217028 503209 ~ 507072 (+)
G2774 NA other downstream 723735 4453778 ~ 4454232 (+)
G2850 NA other downstream 995943 4725986 ~ 4726482 (+)
G6811 NA other downstream 6474788 10204831 ~ 10321679 (+)
G6820 NA other downstream 6697180 10427223 ~ 10433018 (+)
G7018 NA other downstream 7248446 10978489 ~ 10980872 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_023059 mchr2 coding NC_007135.7 CM002908.2 34806822 ~ 34823043 (+)