CI01000000_03864153_03869858


Basic Information

Item Value
gene id CI01000000_03864153_03869858
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 3864137 ~ 3870246 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_03864153_03869858.mRNA
CACAGCCACGCTTCATTCAGACGGCACACAGACACCCTGCAGGGGCCAAACGTCACCCTCATGTGGAACCAGAAGAATCCCTGGATCTCTGCTCTGGTCCTGGTGGGACTTTTACAGAAAGTCAGTGGACTATCCAATACCCAGCCCAGGTGTAGGGGACACTATACACAACTATGGTGCGAAAAACATAAATGGGACCCAATACATCCCATTCTCCCATTATTCTGGGAAGCATGTCCTCATTGTCAATGTGGCCACCTACTGAGGACTCACCTTCCAATACGTAGGTATGTTCGTCCAGGCAATGGATTTGTTCCAAACTTTCCGTTATTTGAGAAGGTGGATGTGAATGGAGACAACGAACAGGCCCTTTTCACATTTTTAAAGAATGCTTGCCCACCCGTGGGAGACAGTTTCGGTAACGCCAACAGATTGTTTTGGGAACCTCTCAAGGTCAACGACATCAAGTGGAACTTTGAGAAGTTTCTAGTGGGGCCAGACGGAAGACCAGTAATGAGGTGGTTTCCAAGGGTGAACGTATCTGAAGTTAGGGCAGACATCTTGAAATACTTCCGCCAGCTTGTTAATCAGCAAAAGGCTGATTAACTTTGAAACAGTGGATTCAATTGTACATTCGTCTCTCTCTCTTTCCAGAATATACTGTGTTTAACTAGTTAACAGCAAGATTACATGTGGCAAAGTTTAAAACCTTTGTGAATTGGATTATTGTTACAAGAATTTGAATGGATTCTCAGACTGCTCCTTCCAGAGGCTGTCAAGGGATCTGTTTGGAGACTGGCATGTTGATGACGGGAAGGCTTGAAAACAGACACTCTGTGGTGCCTGACCTGAGACCAAGGGCCAGTGGGCAGCTCTTTAGTGCATTCAGGCTGCTCTGCTGTTCCTTTTCAATCATGTCTCATCTCCTAAACAATCCTTTGAACTTGCTGCCACCTCTGTGAATTGTTCAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_03864153_03869858.mRNA False 974 mRNA 0.46 4 3864153 3870226

Neighbor

gene id symbol gene type direction distance location
CI01000000_03724666_03729920 MCHR2 coding upstream 134110 3724100 ~ 3730043 (+)
CI01000000_03630643_03637287 LRRTM2 coding upstream 226077 3630591 ~ 3638076 (+)
CI01000000_03232984_03233709 NA coding upstream 630164 3232984 ~ 3233989 (+)
CI01000000_03220166_03232503 NA coding upstream 631650 3220166 ~ 3232503 (+)
CI01000000_03184726_03189468 FAF2 coding upstream 674685 3184680 ~ 3189468 (+)
CI01000000_03919871_03926839 NA coding downstream 48008 3918234 ~ 3926911 (+)
CI01000000_03930421_03932454 NA coding downstream 60195 3930421 ~ 3933213 (+)
CI01000000_03962507_03966711 N4BP3 coding downstream 92085 3962311 ~ 3966796 (+)
CI01000000_04019072_04022985 PPP2CA.L, PP2AA, PPP2CB, PPP2CA coding downstream 148846 4019072 ~ 4023055 (+)
CI01000000_04027941_04033360 SFXN1 coding downstream 157611 4027837 ~ 4033822 (+)
G2354 NA non-coding upstream 36178 3827698 ~ 3827975 (+)
G2351 NA non-coding upstream 41787 3822127 ~ 3822366 (+)
G2342 NA non-coding upstream 50956 3812942 ~ 3813197 (+)
G2337 NA non-coding upstream 60404 3803286 ~ 3803749 (+)
G2320 NA non-coding upstream 119330 3744573 ~ 3744823 (+)
G2293 NA non-coding downstream 2214 3872440 ~ 3875696 (+)
G2385 NA non-coding downstream 114238 3984464 ~ 3984820 (+)
CI01000000_04076566_04077988 NA non-coding downstream 206301 4076018 ~ 4078074 (+)
CI01000000_04090995_04093696 SCOC, SCOCB non-coding downstream 220209 4090547 ~ 4093745 (+)
G2294 NA non-coding downstream 248358 4118584 ~ 4119862 (+)
G579 NA other upstream 1955345 1767917 ~ 1908808 (+)
G435 NA other upstream 2431299 1425121 ~ 1432854 (+)
G350 NA other upstream 3187216 671842 ~ 676937 (+)
G252 NA other upstream 3357081 503209 ~ 507072 (+)
G2774 NA other downstream 583552 4453778 ~ 4454232 (+)
G2850 NA other downstream 855760 4725986 ~ 4726482 (+)
G6811 NA other downstream 6334605 10204831 ~ 10321679 (+)
G6820 NA other downstream 6556997 10427223 ~ 10433018 (+)
G7018 NA other downstream 7108263 10978489 ~ 10980872 (+)

Expression


Co-expression Network