G2342


Basic Information

Item Value
gene id G2342
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 3812942 ~ 3813197 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU2613
AGCTTCTAAGCTTCATGAAGCAATGTTTTGAAATCGCCCATCACTAGATATTGTTGAAAAGTCGTTATTTTGTATTTTGGCGCACAAAAAGTATTCTCATCACTTCATAACATTAAGGTTGAACCACTGTAGTAAACATTAACTGTTCTAAATATATCTTTAGTAGCTTTCTGGGCGTTTGAAAGTATAAATTAACTTGCTGTCAATGCAGGCCTCACTGAACCATCGAATTCTATCAAAAATATCTTAATTTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2613 True 256 lncRNA 0.36 1 3812942 3813197

Neighbor

gene id symbol gene type direction distance location
CI01000000_03724666_03729920 MCHR2 coding upstream 82899 3724100 ~ 3730043 (+)
CI01000000_03630643_03637287 LRRTM2 coding upstream 174866 3630591 ~ 3638076 (+)
CI01000000_03232984_03233709 NA coding upstream 578953 3232984 ~ 3233989 (+)
CI01000000_03220166_03232503 NA coding upstream 580439 3220166 ~ 3232503 (+)
CI01000000_03184726_03189468 FAF2 coding upstream 623474 3184680 ~ 3189468 (+)
CI01000000_03864153_03869858 NA coding downstream 50956 3864137 ~ 3870246 (+)
CI01000000_03919871_03926839 NA coding downstream 105037 3918234 ~ 3926911 (+)
CI01000000_03930421_03932454 NA coding downstream 117224 3930421 ~ 3933213 (+)
CI01000000_03962507_03966711 N4BP3 coding downstream 149114 3962311 ~ 3966796 (+)
CI01000000_04019072_04022985 PPP2CA.L, PP2AA, PPP2CB, PPP2CA coding downstream 205875 4019072 ~ 4023055 (+)
G2337 NA non-coding upstream 9193 3803286 ~ 3803749 (+)
G2320 NA non-coding upstream 68119 3744573 ~ 3744823 (+)
G2319 NA non-coding upstream 71008 3741708 ~ 3741934 (+)
G2283 NA non-coding upstream 113575 3699104 ~ 3699367 (+)
G2204 NA non-coding upstream 124753 3664849 ~ 3688189 (+)
G2351 NA non-coding downstream 8930 3822127 ~ 3822366 (+)
G2354 NA non-coding downstream 14501 3827698 ~ 3827975 (+)
G2293 NA non-coding downstream 59243 3872440 ~ 3875696 (+)
G2385 NA non-coding downstream 171267 3984464 ~ 3984820 (+)
G579 NA other upstream 1904134 1767917 ~ 1908808 (+)
G435 NA other upstream 2380088 1425121 ~ 1432854 (+)
G350 NA other upstream 3136005 671842 ~ 676937 (+)
G252 NA other upstream 3305870 503209 ~ 507072 (+)
G2774 NA other downstream 640581 4453778 ~ 4454232 (+)
G2850 NA other downstream 912789 4725986 ~ 4726482 (+)
G6811 NA other downstream 6391634 10204831 ~ 10321679 (+)
G6820 NA other downstream 6614026 10427223 ~ 10433018 (+)
G7018 NA other downstream 7165292 10978489 ~ 10980872 (+)

Expression


Co-expression Network