G4611


Basic Information

Item Value
gene id G4611
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 19608383 ~ 19611515 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU6568
tttttatttattaaagcctACTTATTATCTCAACTCAACATCAAACAGTAGCTTAGCAAAACTACAAATATCTCTTTGATAATTAGCCGATTAAAGAACTGCACTTGGGAGAAGTTAAAGaagtaatattttgtataacttATGCATGTGTTAGAACAGAAATTACAATTAACACTGAAgatttaatgcaataataaacatttagtcTTATAAGAAAGGcagtataatataatttcatatatatatatatgaaagtacaaaacaatcaaagaaacaaaggtggcattaaaataaaataaaaaaaacaacagttgaATTCAAGAAGGCCTCTGATGAATAAGAAAGTTATCCCATCAAGCTAAAatacttcatttgaacaaaacaTACCACATGTGGCTCTGACTGTTATTAAAGTGTTTCTATACATAAACGCTCCTTACTAGGAGCTGTACTAGGTATACAACAATACAGCTCACAGTTCAGTTAGCCAACATTCACTTGCTGTTTTGTTCTAGCTTTGGCACAGCTACAGCAagagtaatattatttttcattctatattctttactttaattaaaagtcaaaaaacaacaacaacaacaacaacaacataaaacaaatattccAAAATAAAGAGTGCTTCTTAGTACCGGTAGCTCACAGCTGCTGGCAAACTGGACAACACATGAATTCCCATTTAAAAGATAAACACgattgtaaacaaaaatgtacagcaATAAAAAGAAGTAACCATCTTGATTAAATTTGCAGCCTTCATTCACAATATGTAGTGCAATTTCTCTCAGGTCAAGCATCTATTGCTGCATTTTGAGGCTATTCTGTAAAAATACCTCTGACCCTTTGGTCTGCTTTGTTCTGTGTATCTTTCCAGAATTTCCTGCAAGGTTTACAACATGTGCCACGCGACCTATCTGTGACCCCAGTCAGATTTCATTCACTTCATCTATGGTTACTGGGAGTAACACGTTTGGCTTTCCCACCGTCCACATATTGACTGCATCTGTCAGCTCTTTTGACAAACGAGCGCTTGTGTGACTTTCATACAGGGGATGGCTTTGGACGATGCACTCTTAATTTCCCAATCTGACAATGTAATAAAGagtaacaacaataaaaatctatCCACAATATCCAACTATGTGCAGGCAGAGTAAAGCTTTTTGCTTTAGCCAGTTCATCTATAATACCGTTGCATGTCTTTTCAAAGAGGCTGTAATTACCTCTGTAATTACACAGTAGTATATAATCTCTTCTCTGCCGTCTTGATTTTAGTAGGTATTGTAAAAAAGTGCttgtaaaaagtcatttttatggCATTGCATTCAACCGCTAAACCAAAATGCCCCCCAcaccacagattaaaaaaaacgtttggctcttgttttaaatataaaaatactaacaGGCAAGTACCAAAACTTATCATATAAAAGTGCAACTGtatttttcaggttttagtGACCAGAAAATGGCGGCCAGTGCACAACGTCCAATTAGATTCTCAGCAGCTTGGAATGCTGCTGTCGTCTTTAAAACACATCGACAACAATAAGAAAGAGGCAGGGGCTTGTGTACCTAGTGCAATCGCGGGGGTTTTCCGTATGAAATTTCAATAGGACCACTTTGGGGTTGGGATGCCACTTTGGTGCACTACTGACACTGAGCTCTGGAAGAAGTACATCGGTGGAATCACTTCCTTAAGATAGCTATATCCTCTTCAGCTAACTGTCTCTTTAAAGCCCATAATTCTATATCTTTGTTTAAGTTCTTATTTAACTTACTCAACTTTTTATCAGAAATCTTAGAATAATTTTCAGGAAGGCAATTAATGGTGCTTGCACCAGAACGAACAAAGAGGcactttgtcttgttttccttcTTGTTTAACGTAGTGTGAAAACGTTTCTTCTGAGTTAATTTATACTTCGGGACAACGTCAATCTCAATAACCCACCTCTCCTCGTTATTTGGACAATTAACTTTAACAAACTTGGGGGGCCTGATGCACGCCATTGCAAGTACACTTTTCTCTCTGAAGTGTTCCTTCAGACCCTTATCAAATGCGTCTACATATTTATCCCGACGTGGCACCTCTAGTCCAATAATTTGTCCGTGTTTGTGCAGTGGTTCATCTCCAACACCGAAATGGATAGTTCCGTTAGATCGAGAATTAATGCATGCTGCACAAAACCAGAATGCttcatttttgaatttttttaagacattctCTTCTAAAGCATCTTGTGTGTTTGCCAAGAGCTTGTACTCATGTATAGGATCGATAAGATTGCTTGGGCCAGTCTCAATTGGAAGTATGTCGTTTTGTGTGTATTCAAATGTTTCACTGCTTTTATCAAAAGGGCGGGGAGCACAGTAACGAAACTTCTCACCGGTCACCTGTTCTTTGGTCTCACTCTCTACAATATTTGTTTGCGCTGCGCATTGCATCAAAGGCTGTGCGCTACTTGCCTCATCTGCTTTGGCATACATGCTGCTATACTGTTCCTCCAACCGTACAGCATTTTCATCTTGAAAGTGTGAAGCATTGCCTGTACATCTGGGTACGTCTTCTGAGGCCCTTGACCATATCTCCACGCTTGATGTGTCACTGTTTTCTTCTATGCTGATTTGATCAAGCTGCTTATCAGACCAAGAGGTATGGCTTTCAGCCCGTCCTGTTTCTTGTTGAAACTGGTGTGCTGCAGAGGTCCCTATTAATGCATCCGCGTCTTTGGTTGTGGCATGGTAGGATGTTTTTAACTTGGCCACTATTTTAGTGATGTGAACTGCAGGTCCCTGTGATAAACCAATGTCTAGGAGGTCTTGTTTGTCAAAATGAATTAGTGAGGCTCCATAAACTTCGTTATTGTAAAGAATCTTAGCAACCTGTACGGGGACATTGTTCTCGCTTAGCCACTGGTAGACATCAGTTCTATTCCAGTGATCTATGCAATAATTCAGGTTTGCCTTGCCTGATGTCCTGTTGTGTTCCACATGGCTATTCCCCTGGTTTTCTTCAATGCTGATTTGTGCAGGCAGCTCCATTTCAGCAGATCCA
>TU6569
tttttatttattaaagcctACTTATTATCTCAACTCAACATCAAACAGTAGCTTAGCAAAACTACAAATATCTCTTTGATAATTAGCCGATTAAAGAACTGCACTTGGGAGAAGTTAAAGaagtaatattttgtataacttATGCATGTGTTAGAACAGAAATTACAATTAACACTGAAgatttaatgcaataataaacatttagtcTTATAAGAAAGGcagtataatataatttcatatatatatatatacatgaaagtacaaaacaatcaaagaaacaaaggtggcattaaaataaaataaaaaaGTAACCATCTTGATTAAATTTGCAGCCTTCATTCACAATATGTAGTGCAATTTCTCTCAGGTCAAGCATCTATTGCTGCATTTTGAGGCTATTCTGTAAAAATACCTCTGACCCTTTGGTCTGCTTTGTTCTGTGTATCTTTCCAGAATTTCCTGCAAGGTTTACAACATGTGCCACGCGACCTATCTGTGACCCCAGTCAGATTTCATTCACTTCATCTATGGTTACTGGGAGTAACACGTTTGGCTTTCCCACCGTCCACATATTGACTGCATCTGTCAGCTCTTTTGACAAACGAGCGCTTGTGTGACTTTCATACAGGGGATGGCTTTGGACGATGCACTCTTAATTTCCCAATCTGACAATGTAATAAAGagtaacaacaataaaaatctatCCACAATATCCAACTATGTGCAGGCAGAGTAAAGCTTTTTGCTTTAGCCAGTTCATCTATAATACCGTTGCATGTCTTTTCAAAGAGGCTGTAATTACCTCTGTAATTACACAGTAGTATATAATCTCTTCTCTGCCGTCTTGATTTTAGTAGGTATTGTAAAAAAGTGCttgtaaaaagtcatttttatggCATTGCATTCAACCGCTAAACCAAAATGCCCCCCAcaccacagattaaaaaaaacgtttggctcttgttttaaatataaaaatactaacaGGCAAGTACCAAAACTTATCATATAAAAGTGCAACTGtatttttcaggttttagtGACCAGAAAATGGCGGCCAGTGCACAACGTCCAATTAGATTCTCAGCAGCTTGGAATGCTGCTGTCGTCTTTAAAACACATCGACAACAATAAGAAAGAGGCAGGGGCTTGTGTACCTAGTGCAATCGCGGGGGTTTTCCGTATGAAATTTCAATAGGACCACTTTGGGGTTGGGATGCCACTTTGGTGCACTACTGACACTGAGCTCTGGAAGAAGTACATCGGTGGAATCACTTCCTTAAGATAGCTATATCCTCTTCAGCTAACTGTCTCTTTAAAGCCCATAATTCTATATCTTTGTTTAAGTTCTTATTTAACTTACTCAACTTTTTATCAGAAATCTTAGAATAATTTTCAGGAAGGCAATTAATGGTGCTTGCACCAGAACGAACAAAGAGGcactttgtcttgttttccttcTTGTTTAACGTAGTGTGAAAACGTTTCTTCTGAGTTAATTTATACTTCGGGACAACGTCAATCTCAATAACCCACCTCTCCTCGTTATTTGGACAATTAACTTTAACAAACTTGGGGGGCCTGATGCACGCCATTGCAAGTACACTTTTCTCTCTGAAGTGTTCCTTCAGACCCTTATCAAATGCGTCTACATATTTATCCCGACGTGGCACCTCTAGTCCAATAATTTGTCCGTGTTTGTGCAGTGGTTCATCTCCAACACCGAAATGGATAGTTCCGTTAGATCGAGAATTAATGCATGCTGCACAAAACCAGAATGCttcatttttgaatttttttaagacattctCTTCTAAAGCATCTTGTGTGTTTGCCAAGAGCTTGTACTCATGTATAGGATCGATAAGATTGCTTGGGCCAGTCTCAATTGGAAGTATGTCGTTTTGTGTGTATTCAAATGTTTCACTGCTTTTATCAAAAGGGCGGGGAGCACAGTAACGAAACTTCTCACCGGTCACCTGTTCTTTGGTCTCACTCTCTACAATATTTGTTTGCGCTGCGCATTGCATCAAAGGCTGTGCGCTACTTGCCTCATCTGCTTTGGCATACATGCTGCTATACTGTTCCTCCAACCGTACAGCATTTTCATCTTGAAAGTGTGAAGCATTGCCTGTACATCTGGGTACGTCTTCTGAGGCCCTTGACCATATCTCCACGCTTGATGTGTCACTGTTTTCTTCTATGCTGATTTGATCAAGCTGCTTATCAGACCAAGAGGTATGGCTTTCAGCCCGTCCTGTTTCTTGTTGAAACTGGTGTGCTGCAGAGGTCCCTATTAATGCATCCGCGTCTTTGGTTGTGGCATGGTAGGATGTTTTTAACTTGGCCACTATTTTAGTGATGTGAACTGCAGGTCCCTGTGATAAACCAATGTCTAGGAGGTCTTGTTTGTCAAAATGAATTAGTGAGGCTCCATAAACTTCGTTATTGTAAAGAATCTTAGCAACCTGTACGGGGACATTGTTCTCGCTTAGCCACTGGTAGACATCAGTTCTATTCCAGTGATCTATGCAATAATTCAGGTTTGCCTTGCCTGATGTCCTGTTGTGTTCCACATGGCTATTCCCCTGGTTTTCTTCAATGCTGATTTGTGCAGGCAGCTCCATTTCAGCAGATCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6568 True 3079 lncRNA 0.38 2 19608383 19611515
TU6569 False 2640 lncRNA 0.39 3 19608383 19611515

Neighbor

gene id symbol gene type direction distance location
zfp91 LOC107671112,LOC107551018,LOC107748831,LOC107674257,LOC107737094 coding downstream 11381 19589806 ~ 19597002 (-)
cntf NA coding downstream 29708 19575214 ~ 19578675 (-)
si:dkey-117m1.4 LOC107671095,LOC107748830,LOC107551007,LOC107674247,LOC107559642,LOC107737095 coding downstream 36678 19554440 ~ 19571705 (-)
ing2 ing2,LOC107550937,LOC107671086,LOC107748834,LOC107737097,LOC107684977 coding downstream 84929 19521339 ~ 19523454 (-)
stox2a stox2a,stox2,LOC107550915,LOC107748824,LOC107671062,LOC107559650,LOC107684970,LOC108434127 coding downstream 89746 19475990 ~ 19518637 (-)
tesk1a si:ch211-113e8.3,LOC107671138,LOC107551064,LOC107712023,LOC107737090,LOC107674262,LOC107559636 coding upstream 314 19611829 ~ 19624241 (-)
maml3 maml3,LOC107674228,LOC107737085,LOC107712021,LOC107556508,LOC107671314 coding upstream 53582 19665097 ~ 19757356 (-)
clgn clgn,LOC107551136,LOC107671330,LOC107712024,LOC107737082,LOC107674239,LOC107556507 coding upstream 165576 19777091 ~ 19785647 (-)
hmx4 hmx4,LOC107712017,LOC107552578,LOC107671594,LOC107674271,LOC107752946,LOC107556514 coding upstream 266676 19878191 ~ 19879651 (-)
hmx1 LOC107671606,LOC107712016,LOC107556513,LOC107674270,LOC107552587,LOC107752954 coding upstream 269610 19881125 ~ 19882724 (-)
G4607 NA non-coding downstream 27522 19579564 ~ 19580861 (-)
G4600 NA non-coding downstream 55237 19552628 ~ 19553146 (-)
G4597 lgi2b,LOC107671185,LOC107550949,LOC107748826,LOC108263253 non-coding downstream 64023 19542976 ~ 19544360 (-)
G4596 NA non-coding downstream 67033 19540584 ~ 19541350 (-)
G4590 NA non-coding downstream 79132 19528751 ~ 19529251 (-)
G4615 NA non-coding upstream 19583 19631098 ~ 19632253 (-)
G4671 NA non-coding upstream 324875 19936390 ~ 19936759 (-)
G4713 NA non-coding upstream 326504 19938019 ~ 19938401 (-)
LOC122345298 NA non-coding upstream 544149 20155664 ~ 20157523 (-)
G4870 NA non-coding upstream 588480 20199995 ~ 20265069 (-)
cdk2ap2 cdk2ap2,LOC107684972 other downstream 69237 19535964 ~ 19539146 (-)
znf827 znf827,LOC107550613,LOC107684451,LOC107742547 other downstream 1727966 17811459 ~ 17880417 (-)
smad1 smad1,LOC107684445,LOC107734580 other downstream 1843651 17745837 ~ 17764732 (-)
LOC122330431 lsm6 other downstream 2171676 17434717 ~ 17436707 (-)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other downstream 3159864 16447088 ~ 16448519 (-)
si:dkey-9i23.16 NA other upstream 525520 20137035 ~ 20140579 (-)
zdhhc5a zdhhc5a,LOC107730508,LOC107551501,LOC107746524,LOC107674225,LOC107556824,LOC107664565,LOC108412478 other upstream 677802 20289317 ~ 20312948 (-)
timm10 timm10,LOC107674252,LOC107746912,LOC107556822 other upstream 755614 20367129 ~ 20369111 (-)
G4958 NA other upstream 1072327 20683842 ~ 20686740 (-)
ctnna2 ctnna2,LOC107689479 other upstream 1294655 20906170 ~ 21410571 (-)

Expression


Co-expression Network