G4596


Basic Information

Item Value
gene id G4596
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 19540584 ~ 19541350 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU6533
ACTCAAGATGAGGAAGCCCTGAGAACGCATCCTCCTTGATTTCAGAAAACGCATTAGAACTAAGGAgactaaaaagagaaaagatgccagaaaaatctaaaacataaatatgaccAGCATAACAAAAAGTGCACGGCATTCTGCCTCttagtatttaataatgcaGATAAACAggcacatttataaaaagtaatgcaGCAGCCACTTACAGTAACTGCAGTGAGGGCATGAGCGAGAACATAGCCTCCTTGATTTCTGGGAAACTGCAATTGACAATACTCCTAAAAGAAACACGAaggctaaaataaattaacaaagaCGTCAATCGTTTCTTGTTTGTACCACACACTAAGATGCGCGTTCAGTTTCGCGATATAAACACGTGCTATACCCCACTGCGTTTCGTAAAATGACACACATTTTCGCTAATAAATTGCTGACGGACATAATATCAGACTTACAGAGAGTTGATGTCGCTCGGTACAGTCCGTGGGAGGAGAGACGAACCCACGCAGATGATTGAATCCGTCGTGCAAGTGCATCCTGAAGGACATTTGAATACTCGCTTTGATCGGGACGCTTGAAACGAACAAACGAGCAGCAAAGTTACCAAAAGGCGCTTTCGGATGGAAGACGGTTTGTCGTTCGTGAGATCCATGGCTGTGAAGCTGCGAGTCGAAGGCAGGCGCTCTCCGGTCAGTCAGCAGCGAATGAGTCGAGGATCAGCAGCGGCTCTGATGCAGTCAGTGTTTTAGACTGTCCCATCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6533 True 767 lncRNA 0.45 1 19540584 19541350

Neighbor

gene id symbol gene type direction distance location
ing2 ing2,LOC107550937,LOC107671086,LOC107748834,LOC107737097,LOC107684977 coding downstream 17130 19521339 ~ 19523454 (-)
stox2a stox2a,stox2,LOC107550915,LOC107748824,LOC107671062,LOC107559650,LOC107684970,LOC108434127 coding downstream 21947 19475990 ~ 19518637 (-)
tmem134 tmem134,LOC107737124,LOC107671531,LOC107684976 coding downstream 66763 19469503 ~ 19473821 (-)
dctd dctd,LOC107671033,LOC107550883,LOC107684975 coding downstream 76383 19445918 ~ 19464201 (-)
vegfc vegfc,LOC107752233,LOC107670960,LOC107558783,LOC107676691,LOC107737103,LOC107552015 coding downstream 624648 18885507 ~ 18915936 (-)
si:dkey-117m1.4 LOC107671095,LOC107748830,LOC107551007,LOC107674247,LOC107559642,LOC107737095 coding upstream 13090 19554440 ~ 19571705 (-)
cntf NA coding upstream 33864 19575214 ~ 19578675 (-)
zfp91 LOC107671112,LOC107551018,LOC107748831,LOC107674257,LOC107737094 coding upstream 48456 19589806 ~ 19597002 (-)
tesk1a si:ch211-113e8.3,LOC107671138,LOC107551064,LOC107712023,LOC107737090,LOC107674262,LOC107559636 coding upstream 70479 19611829 ~ 19624241 (-)
maml3 maml3,LOC107674228,LOC107737085,LOC107712021,LOC107556508,LOC107671314 coding upstream 123747 19665097 ~ 19757356 (-)
G4590 NA non-coding downstream 11333 19528751 ~ 19529251 (-)
LOC122332954 LOC108434131 non-coding downstream 99725 19413249 ~ 19440859 (-)
G4433 NA non-coding downstream 667740 18869332 ~ 18872844 (-)
G4413 wdr17,LOC107737118 non-coding downstream 690224 18846669 ~ 18850360 (-)
G4401 NA non-coding downstream 869261 18671018 ~ 18671323 (-)
G4597 lgi2b,LOC107671185,LOC107550949,LOC107748826,LOC108263253 non-coding upstream 1626 19542976 ~ 19544360 (-)
G4600 NA non-coding upstream 11278 19552628 ~ 19553146 (-)
G4607 NA non-coding upstream 38214 19579564 ~ 19580861 (-)
G4609 zgc:194443,LOC107559638,LOC107737093,LOC107559639,LOC107674248,LOC107552058,LOC107551053,LOC107551042 non-coding upstream 56860 19598210 ~ 19809631 (-)
G4611 NA non-coding upstream 67033 19608383 ~ 19611515 (-)
cdk2ap2 cdk2ap2,LOC107684972 other downstream 1438 19535964 ~ 19539146 (-)
znf827 znf827,LOC107550613,LOC107684451,LOC107742547 other downstream 1660167 17811459 ~ 17880417 (-)
smad1 smad1,LOC107684445,LOC107734580 other downstream 1775852 17745837 ~ 17764732 (-)
LOC122330431 lsm6 other downstream 2103877 17434717 ~ 17436707 (-)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other downstream 3092065 16447088 ~ 16448519 (-)
si:dkey-9i23.16 NA other upstream 595685 20137035 ~ 20140579 (-)
zdhhc5a zdhhc5a,LOC107730508,LOC107551501,LOC107746524,LOC107674225,LOC107556824,LOC107664565,LOC108412478 other upstream 747967 20289317 ~ 20312948 (-)
timm10 timm10,LOC107674252,LOC107746912,LOC107556822 other upstream 825779 20367129 ~ 20369111 (-)
G4958 NA other upstream 1142492 20683842 ~ 20686740 (-)
ctnna2 ctnna2,LOC107689479 other upstream 1364820 20906170 ~ 21410571 (-)

Expression


Co-expression Network