G4609 (zgc:194443,LOC107559638,LOC107737093,LOC107559639,LOC107674248,LOC107552058,LOC107551053,LOC107551042)


Basic Information

Item Value
gene id G4609
gene name zgc:194443,LOC107559638,LOC107737093,LOC107559639,LOC107674248,LOC107552058,LOC107551053,LOC107551042
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 19598210 ~ 19809631 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU6555
TTAGTTTCAGAtaaaaatttcttttttattcaaatgaagtGAACAAATACAATGAATCATTTCTGTTAAAATATCTCCCTCTGTCTTTGCTCCTCCGTTTCCTTCAAGATACGTTTCTTCTCCTCCTCGATCGCTCTCTCTACCCTTTCAAGCATCTCACTGGTGTAGTACTGTCCTCCATTTCCAGTGACCATTTTATCAATCTGGTCCAGCAGCTGATTGACCTGTTCAGGGTTTTGTTCTTTATTGTTGAACACATGGTATCGTCCGCTGCATGCTTTGATGAAACTGAGCAGTTCTGGGTTGTCCCGCACaaatgtgtgaatgtttttgccCTCCAGTCGATCTCCATGAGTGAACAGAGCCATGATGTAAGCAGAGGATTCCTCACCAAAAACAGCTTGAATGATCCTTACAGCTTCTGCCTCTTCATCTGTGAATCTGCCCAGCTGAATCACAACCAAGAAGACATGTGGACCAGGAGCAGAGAGAGGGATGCAGAGTTTAATTCTCTTGACCACTTCCTCTGTAGTTAAGCTGGTGTCAAACAGACCTGGAGAGTCAATGACGGACACTTTTCTGCCGTTTATTATtgcgtgttttttttcacactccCCAGTCACAGAAGAGGACGATATCtctgatttaaaatgcttttttcccaGGATAGTGTTGCCTGTTGCACTTTTTCCCACTCCTGTTTTTCCAACCAAAAGAATCCGAAGTGGATCGCCTGGATGA
>TU6564
TTAGTTTCAGAtaaaaatttcttttttattcaaatgaagtGAACAAATACAATGAATCATTTCTGTTAAAATATCTCCCTCTGTCTTTGCTCCTCCGTTTCATCTCTTCCTCGATAGCTCTCTCAGCCCTTTCAAGCATCTCACTGGTGTAGTATTGACCTCTATTTCCAGTGACCATTTCTCATTCACCAGAAGGTAAATATGCACTTGAATATTATCTATTAATAACTTAACTATTTAACTTTAGACATAAACTATTGAGATTTGAAGTACTTTCTTCATTTCAATTAGTTTTTCAGTCACAACACTCAGTTTTCACATCAGAAGGTTTGCTTAATGCTTTAAGCAAAGAACTGGCCCCTTTGGATTAAGAACGTATTATTCTTAGCTTGGTATCTTGCCAGCTggtcatttattattgtttaatttttttaatgctttttcatAGGCCTCATCCTGAAGTTGAGCCCTCAGAGCTTCtatctctctccgtctctgctCCTCCGTCTCCTTCAAGATACGTTTCTTCTCTTCCTCGATCGCTCTCTCTACCCTTTCAAGCATCTCACTGGTGTAGTACTGTCCTCCATTTCCAGTGACCATTTTATCAATCTGGTCCAGCAGCTGATTGACCTGTTCAGGGTTTTGTTCTTTATTGTTGAACACATGGTATCGTCCGCTGCATGCTTTGATGAAACTGAGCAGTTTTGGGTTGTCCCGCACaaatgtgtgaatgtttttgccCTCCAGTCGATCTCCATGAGTGAACAGAGCCATGATGTAAGCAGAGGATTCCTCACCAAAAACAGCTTGAATGATCCTTACAGCTTCTGCCTCTTCATCTGTGAATCTGCCCAGCTGAATCACAACCAAGAAGACATGTGGACCAGGAGCAGAGAGAGGGATGCAGAGTTTAATTCTCTTGACCACTTCCTCTGTAGTTAAGCTGGTGTCAAACAGACCTGGAGAGTCAATGACGGACACTTTTCTGCCGTTTATTATTGCgtcttttttttcacactcCCCAGTCACAGAAGAGGACGATATCtctgatttaaaatgcttttttttcacactccCCAGTCACAGAAGAGGACGATATCtctgatttaaaatgcttttttcccaGGATAGTGTTGCCTGTTGCACTTTTTCCCACTCCTGTTTTTCCAACCAAAAGAATCCGAAGTGGATCGCCTGGATGATGCACTGAACATTAACAAAAATCACATAATTTTTAACTCTtggtaatataaatacatatacaaacatctatttaaaagaacaatgaaatatacctatatttatatactgtaatacTAACATCCACCGTTGAgttgtaaaattaatatatagaaatataacaaataaataacttacCTACATCATCCAAATCTTGTTTTTGTGGATTGAAGATCTAGAAATTATTTATACGTTACAAATTTGATCACATTTGGCAacttttactgttaaaaagaCAGTCAGCTTAGAGTGGAAAAGTGACAAAATGCAGGCTTACTccacattaaaatgaaagttttgtcTTTAATCATTTACCCCCATGTCGCTCCAAACCcaaaaaagctttgttcttcttcggaacacaatttaagatatacggtatatataacatttacGGTATATATTTACGATATATAAAATGGTTACATCCTGACtggtaattgtttggcagtcagtgggttaagtgattaatgacaaaaaaaaaatgtaactggggtggagtaaccctttaagcatACCTGAATCCCCAATGCAATAGCCAGGACAATTATACAAAGCATCTGTAGTTCTAGGGGGAAGAACACATCCCAAAACTTTGTGGTCGTTGTTGATGGTCCAGAAGTCTCCTGCACAGCTAAAAAAAGCccccacatatatatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtattttttagctaacttttttttattatttaatacatatagtCTCGTTTCATGTCACAGTTTTAGGCAAAAGTAACTTTACATTTTAGCCTACACTTTTTATGATTTCTACTTTATCTTCTATTACAACAGTTTCGTTTAGTAACTTACTGCTATGCTTTAAATCAGGTTTCACTTGTCTGTAAAGCATTGCTGTCTCATTAAATTCGTCAAAAGGCggtaaattgtttttgttttttggttttttcagGAAACCGATTTCGTCTTTTCAATTAGGGTGACCACGCGTGCCATTTTCTTCGGACGCGTCCTTGCCGAGATTTCTACCTCAAGAGCGCTTTGAAAACATAAGGAATCGGTCTGAaggcaaacaaagccaaaacctacaTATTTTAGCATAGTATAATATAGGAATGCTGTCCATGACGCGTCCAGGAAAAATTGGCTCAAATGGTCATCCGGTTTTTCAATGCAGACAATTGGtataaaccattttaaagatACAACTCACCTTTAATTGAAGAGCACATCGTGCGTGTATAGAAGTAGACTGGGT
>TU6565
ttttttttttttaaggtttattaAGGTGTATTACCTTCAATAATACAACAACTGAATATTCACATTGAGCTATCTGTCAGAACATTGGCCAGTTGCGTCTGCCTCTTCTCTCCATAGCGGTTTAATAACAAAGTCAGTTCATTTGTTGATCTTAAGGTAACGTAGCATAGAAAGGGATACAAAAGGGAGAAATTACTCCACCCAGAGGCCAACATTGCACTGCAAATGACTGATCATTTAGATGGCAAATAAATACCTGGTAAACAAAggataaattattttgtatagaGATGAAAAAGCCTTACACAAAACACAGCATGATATTTTTTGCATCATATACCTATAATAATACCCAGCTATTTATTGACATATTGCTCAAGACTTACTCAACTTTTATCAGGGCCATAAGGAGGTCCTAAAGTGCAGATAGTGGGTTTGAGGGCATACTCCGCCAAGAAAGCTTGATTTTCCTGATTTACATgcgtgcattttaaaatagattatgaATGGGATAATAAGAAAAGTTTCAAACTGCGTATATTGTGTCCTCAACCTACAATGAATGTTTTCATGTTGCTCACTAAACAGTGGTGAggtttgatttctttttattagcaaaatagagcaaaaacaggACATTTGGTGTCTAAAACATAAGTCTCTCAATTAACTTTTGTTTATTGAGTTGTTGTATAAAATCTATATCACTTTTGtaatcaaacatttttagagaaaaatggcACTCTTTGTGTCATATTGATTAACTatataaagtgttataaatatttaacttttttgtccCCATGTCTTGAATTTAtgattattcaaatgtattttaatagacTGAATTTAGaagaacacactcacactaGTCTTGAATTCGCATACAGCACACATAAATTGGGCCGATGTCAACTACATGGAAAATGTTGAAAAGGTTACCTTTAACGGCCAAAACCAGATTGGAATCctatagggtttttttttgatAGGATAAAACgttattatactgtacaaataatACTGTAGGCTTTGAATGGGATCCAATTGCCCAGCAAGCATGTCTTTGGCTGTTAAGCGCACTTAGTTCTGAACCCCATACATAGACAGTCAACATTAATTGCACTTTTTAATTCACACTCATACAAGAAAATGATGCCTAATTTGATCTGCAACattcaaagacagaaagaaagacagaaagaaagaaagaaaaatgttgatatGCAGCTAGGCTACAACAATCTGAGTATTATCAGACTATAAAGACTAGgtatacactctcagaaataaagatacaaaagctgtcattgggtaggtacatttttaaaaaggtacatgtttgtattaGTACTTAAATTGTATGCCTAAAGGTACAAAAGGtgtgtagtttttaaaaaggtatacCACACCAGTGACGgctatttctgagagtgtatagGGTACAGTGGGGGAAATCGCCTCCCTACAGTTTTTCccaaaataactatttaataaagtcaagacaatttttcttttgtaactATGGACATTGTTTACTAGAGTGATATAGAAATGTTCAGCATGAAGCTTGCGCTGGTGACGTACCTGAGAGAAAACGGATTTTGAAGAAtctaaaaactgcatgtttgcaTGGAAATTTTTTCAACCTTTCTTCACAATATAAGTGGCTTTTTAAGAAGATACTTTTATATGGGATATAATTTGAACTGACATCCGAAAATGTTCAACTAAAAAATCTGAAGACtctttttacaatattgctgaCAAATTGTGCTATATGATCAAAAATTGAACTGCTTCTCTCAGCCTTCCATCTTGCCTGCTGCTCATGACGTTTATTCAGTTCTTCTCGTTCAAGCTCTGACTTCAGAGCTTCtatctctctccgtctctgctCCTCTGTCTCCTTCAAGATACGTTTCATCTCTTCCTCGATCGCTCTCTCAGCCCTTTCAAGCATCTCACTGGTGTAGTATTGTCCTCCATTTCCAGTGACCATTTTATCAATCTGGTCCAGCAGCTGATTGACCTGTTCAGGgttttgttctttattattgAACACATGGTATCGTCCGCTGCATGCTTTGATGAAACTGAGCAGTTCTGGGTTGTCCCGCACaaatgtgtgaatgtttttgccCTCCAGTCGATCTCCATGAGTGAACAGAGCCATGATGTAAGCAGAGGATTCCTCACCAAAAACAGCTTGAATGATCCTTACAGCTTCTGCCTCTTCATCTGTGAATCTGCCCAGCTGAATCACAACCAAGAAGACATGTGGACCAGGAGCAGAGAGAGGGATGCAGAGTTTAATTCTCTTGACCACTTCATCTGTAGTTAAGCTGGTGTCAAACAGACCTGGAGAGTCAATGACGGACACTTTTCTGCCGTTTATTATTGCATGAttttttttcacactccCCAGTCACAGAAGAGGACGATATCtctgatttaaaatgcttttttcccaGGATAGTGTTGCCTGTTGCACTTTTTCCCACTCCTGTTTTTCCAACCAAAAGAATCCGAAGTGGATCGCCTGGATGATGCACTGAACATTAACAAAAATCACATAATTTTTAACTCTtggtaatataaatacatatacaaacatctatttaaaagaacaatgaaatatacctatatttatatactgtaatacTAACATCCACCGTTGAgttgtaaaattaatatatagaaatataacaaataaataacttacCTACATCATCCAAATCTTGTTTTTGTGGATTGAAGATCTAGAAATTATTTATACGTTACAAATTTGATCACATTTGGCAacttttactgttaaaaagaCAGTCAGCTTAGAGTGGAAAAGTGACAAAATGCAGGCTTACTccacattaaaatgaaagttttgtcTTTAATCATTTACCCCCATGTCGCTCCAAACCcaaaaaagctttgttcttcttcggaacacaatttaagatatacggtatatataacatttacGGTATATATTTACGATATATAAAATGGTTACATCCTGACtggtaattgtttggcagtcagtgggttaagtgattaatgacaaaaaaaaaatgtaactggggtggagtaaccctttaagcatACCTGAATCCCCAATGCAATAGCCAGGACAATTATACAAAGCATCTGTAGTTCTAGGGGGAAGAACACATCCCAAAACTTTGTGGTCGTTGTTGATGGTCCAGAAGTCTCCTGCACAGCTAAAAAAAGCccccacatatatatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtattttttagctaacttttttttattatttaatacatatagtCTCGTTTCATGTCACAGTTTTAGGCAAAAGTAACTTTACATTTTAGCCTACACTTTTTATGATTTCTACTTTATCTTCTATTACAACAGTTTCGTTTAGTAACTTACTGCTATGCTTTAAATCAGGTTTCACTTGTCTGTAAAGCATTGCTGTCTCATTAAATTCGTCAAAAGGCggtaaattgtttttgttttttggttttttcagGAAACCGATTTCGTCTTTTCAATTAGGGTGACCACGCGTGCCATTTTCTTCGGACGCGTCCTTGCCGAGATTTCTACCTCAAGAGCGCTTTGAAAACATAAGGAATCGGTCTGAaggcaaacaaagccaaaacctacaTATTTTAGCATAGTATAATATAGGAATGCTGTCCATGACGCGTCCAGGAAAAATTGGCTCAAATGGTCATCCGGTTTTTCAATGCAGACAATTGGtataaaccattttaaagatACAACTCACCTTTAATTGAAGAGCACATCGTGCGTGTATAGAAGTAGACTGGGT

Function

symbol description
zgc:194443 Predicted to enable GTP binding activity. Orthologous to human GIMAP1 (GTPase, IMAP family member 1); GIMAP4 (GTPase, IMAP family member 4); and GIMAP6 (GTPase, IMAP family member 6).

NR:

description
PREDICTED: GTPase IMAP family member 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6555 False 741 lncRNA 0.40 2 19599556 19603201
TU6564 False 2551 lncRNA 0.38 2 19598210 19603201
TU6565 True 3896 lncRNA 0.37 2 19598210 19809631

Neighbor

gene id symbol gene type direction distance location
zfp91 LOC107671112,LOC107551018,LOC107748831,LOC107674257,LOC107737094 coding downstream 1208 19589806 ~ 19597002 (-)
cntf NA coding downstream 19535 19575214 ~ 19578675 (-)
si:dkey-117m1.4 LOC107671095,LOC107748830,LOC107551007,LOC107674247,LOC107559642,LOC107737095 coding downstream 26505 19554440 ~ 19571705 (-)
ing2 ing2,LOC107550937,LOC107671086,LOC107748834,LOC107737097,LOC107684977 coding downstream 74756 19521339 ~ 19523454 (-)
stox2a stox2a,stox2,LOC107550915,LOC107748824,LOC107671062,LOC107559650,LOC107684970,LOC108434127 coding downstream 79573 19475990 ~ 19518637 (-)
hmx4 hmx4,LOC107712017,LOC107552578,LOC107671594,LOC107674271,LOC107752946,LOC107556514 coding upstream 68560 19878191 ~ 19879651 (-)
hmx1 LOC107671606,LOC107712016,LOC107556513,LOC107674270,LOC107552587,LOC107752954 coding upstream 71494 19881125 ~ 19882724 (-)
adra2c adra2c,LOC107552592,LOC107671617,LOC107712015,LOC107752971,LOC107556512,LOC107674202 coding upstream 102049 19911680 ~ 19916332 (-)
dok7b dok7,LOC107749932,LOC107679881,LOC107674231,LOC107714234 coding upstream 157236 19966867 ~ 19984964 (-)
rgs12b rgs12b,LOC107749922,LOC107556525,LOC107714241,LOC107679871,LOC107674230,LOC107551217 coding upstream 185559 19995190 ~ 20032019 (-)
G4607 NA non-coding downstream 17349 19579564 ~ 19580861 (-)
G4600 NA non-coding downstream 45064 19552628 ~ 19553146 (-)
G4597 lgi2b,LOC107671185,LOC107550949,LOC107748826,LOC108263253 non-coding downstream 53850 19542976 ~ 19544360 (-)
G4596 NA non-coding downstream 56860 19540584 ~ 19541350 (-)
G4590 NA non-coding downstream 68959 19528751 ~ 19529251 (-)
G4671 NA non-coding upstream 126759 19936390 ~ 19936759 (-)
G4713 NA non-coding upstream 128388 19938019 ~ 19938401 (-)
LOC122345298 NA non-coding upstream 346033 20155664 ~ 20157523 (-)
G4870 NA non-coding upstream 390364 20199995 ~ 20265069 (-)
LOC122345304 NA non-coding upstream 455654 20265285 ~ 20266183 (-)
cdk2ap2 cdk2ap2,LOC107684972 other downstream 59064 19535964 ~ 19539146 (-)
znf827 znf827,LOC107550613,LOC107684451,LOC107742547 other downstream 1717793 17811459 ~ 17880417 (-)
smad1 smad1,LOC107684445,LOC107734580 other downstream 1833478 17745837 ~ 17764732 (-)
LOC122330431 lsm6 other downstream 2161503 17434717 ~ 17436707 (-)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other downstream 3149691 16447088 ~ 16448519 (-)
si:dkey-9i23.16 NA other upstream 327404 20137035 ~ 20140579 (-)
zdhhc5a zdhhc5a,LOC107730508,LOC107551501,LOC107746524,LOC107674225,LOC107556824,LOC107664565,LOC108412478 other upstream 479686 20289317 ~ 20312948 (-)
timm10 timm10,LOC107674252,LOC107746912,LOC107556822 other upstream 557498 20367129 ~ 20369111 (-)
G4958 NA other upstream 874211 20683842 ~ 20686740 (-)
ctnna2 ctnna2,LOC107689479 other upstream 1096539 20906170 ~ 21410571 (-)

Expression


Co-expression Network