G4870


Basic Information

Item Value
gene id G4870
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 20199995 ~ 20265069 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU6910
TGAATTTCAAATCAAGAgtttattttccatttcatgAAGCAGTTTCCATTTCCCTGTTAATGAAACAGCGTGACAGTTATGGTATCAACTGTATGAATaacaaaatactacaaaattcAAAAGGTGTTGTTTTTCAAGAAATAGGAAATAAATAGAATCTAAACGacagaaatagaaataacaGGGTTGTTACTCTTTTATaaagctcatttttatagaatggttttttatagaaaaacaaacagtaagaCTCAGAGACGGATGAGGGAAACGTGACATGGAATAAACTGATGATGAACATGAACATGTCCCTTTTTCCCCCTTGAACTtgacacatttttatgaaattcgACTCAGTGTTTTACTCTGTTCTTAACAACAAGTAATCATCAACCAATCCTGGAACTCCAGAGAGCATTTTTTGGGCTCGGATCAAGTACAGATGCTATTGCCAAAAGTTTTCAGCATCCGCCTGATGACCAGAATATAATGATCGGACACCTAATAATGATGTTTGgtcttaataaaaatgaaatggccCATGTTCAGGCGAGGGTCCTTTTAAAGGAGAAAAGGCAGGCAAAACAACTTTTCCCATTATACAGGCACAGCAGTAGAACTAAAACaatcaaactgaaaatatttctgaaaatcccctctttattttgaaattaatgaTTCATGGTCAGCATGACACTTCCAACGAAAAAAGGgtttaataaatgtgacttgTTAAAGAGTTTTAATGAAGCACAGTTTAGCTGGCATACCCGAATAAAAGATCATAAGCCACATGGTTTGAATAATGTAAATAGTATTTCGTAAAAATTGATGCATCGCTGTAGGCATATAAGAGCGacagttttcaaaaatagtTACAGCTGAAGGAAGTGTTCCGTGTGAGATGCTAAAATGTTTCAGTCACATGACTGTGGGAATCTGaggaaaatttaattaaatggcaCGACAAAATAGATTGACAGTGTgacctgatttaaaaaaaataacaaaaggaaAATGCCAGAAAAGATAAGGATATTGTATTCTGCcacaaaaaagtgtgttttatcCCAACCAAGTGAGGTAACATCAAACAGATAACTAATGGAACTTGGTATTTATCTCCAGAggctacatgttttttttttttttttttttttttttttttgtaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6910 True 1173 lncRNA 0.37 2 20199995 20265069

Neighbor

gene id symbol gene type direction distance location
ndufs8a ndufs8a,ndufs8,LOC107679876,LOC107746464,LOC107674223,LOC108434795,LOC106602580 coding downstream 500 20196170 ~ 20199495 (-)
zgc:165520 zgc:165520,LOC107749989,LOC107679874,LOC107552638,LOC107746898,LOC107674222,LOC108262789,LOC108434798 coding downstream 4672 20191881 ~ 20195323 (-)
kdm2aa LOC107551394,LOC107674221,LOC107746404 coding downstream 9698 20173861 ~ 20190297 (-)
wu:fc21g02 LOC107749811,LOC107679888,LOC107714230 coding downstream 46112 20148541 ~ 20153883 (-)
vps37c vps37c,LOC107749845,LOC107679880,LOC107551318,LOC107714235,LOC107556517 coding downstream 63444 20130165 ~ 20136551 (-)
med19b med19b,med19,LOC107551486,LOC107730510,LOC103047628,LOC108412480 coding upstream 16219 20281288 ~ 20283889 (-)
rtn4rl2a rtn4rl2a,rtn4rl2,LOC107746539,LOC107674267,LOC107556816,LOC107551512 coding upstream 62042 20327111 ~ 20331588 (-)
crybb1l2 crybb1l2,LOC107551523,LOC107674249,LOC107730514,LOC107556820,LOC107746545,LOC107664576 coding upstream 79886 20344955 ~ 20348750 (-)
unc93b1 unc93b1,LOC107730513,LOC107664560,LOC107746565,LOC107674251 coding upstream 90166 20355235 ~ 20366551 (-)
LOC122344866 NA coding upstream 104462 20369531 ~ 20376584 (-)
LOC122345298 NA non-coding downstream 42472 20155664 ~ 20157523 (-)
G4713 NA non-coding downstream 261594 19938019 ~ 19938401 (-)
G4671 NA non-coding downstream 263236 19936390 ~ 19936759 (-)
G4609 zgc:194443,LOC107559638,LOC107737093,LOC107559639,LOC107674248,LOC107552058,LOC107551053,LOC107551042 non-coding downstream 390364 19598210 ~ 19809631 (-)
LOC122345304 NA non-coding upstream 216 20265285 ~ 20266183 (-)
G4924 LOC107556812,LOC107674268,LOC107730535,LOC107552263 non-coding upstream 177883 20442952 ~ 20444794 (-)
G4930 NA non-coding upstream 194472 20459541 ~ 20460184 (-)
G4934 NA non-coding upstream 201093 20466162 ~ 20469015 (-)
G4946 suclg1,LOC107674246,LOC107746879,LOC107730526,LOC107664570,LOC107578564 non-coding upstream 348847 20613916 ~ 20702298 (-)
si:dkey-9i23.16 NA other downstream 59416 20137035 ~ 20140579 (-)
cdk2ap2 cdk2ap2,LOC107684972 other downstream 660849 19535964 ~ 19539146 (-)
znf827 znf827,LOC107550613,LOC107684451,LOC107742547 other downstream 2319578 17811459 ~ 17880417 (-)
smad1 smad1,LOC107684445,LOC107734580 other downstream 2435263 17745837 ~ 17764732 (-)
LOC122330431 lsm6 other downstream 2763288 17434717 ~ 17436707 (-)
zdhhc5a zdhhc5a,LOC107730508,LOC107551501,LOC107746524,LOC107674225,LOC107556824,LOC107664565,LOC108412478 other upstream 24248 20289317 ~ 20312948 (-)
timm10 timm10,LOC107674252,LOC107746912,LOC107556822 other upstream 102060 20367129 ~ 20369111 (-)
G4958 NA other upstream 418773 20683842 ~ 20686740 (-)
ctnna2 ctnna2,LOC107689479 other upstream 641101 20906170 ~ 21410571 (-)
si:dkey-37g12.1 LOC107692174,LOC107711524 other upstream 1284548 21549617 ~ 21564077 (-)

Expression


Co-expression Network