n4bp2 (n4bp2,LOC107700258,LOC107598270)


Basic Information

Item Value
gene id n4bp2
gene name n4bp2,LOC107700258,LOC107598270
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 13190665 ~ 13201536 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043243467.1
TTTTTGCTTCTCCTCCGAGAGTTGCTCGTCTGGTTTTCTTCTTTGCTTCCTCCAACTTGTAAACAGTGTATCTACCTTCGGCGTCCTGTGAACGGGTCACAGCAGAAtgccaaagaaaaagaaaaacggcCTGAGTCCCTCCCGAGGCCCGTCGCATGCGGCCGAATACGGGAGCGGATCCGAGGGTCGAGCGCACGGGGCACACGGACCTCCCGAGACCCGGCCGGACTCATCATGTGATAACTTCAGGTCCGCGCAGTCCAGGAGAGGTCAGCTGGAAACTCAAAGCAGAGACGAAATCATCCAGAGCATGCAGGAGATGTTTTCACATCTGGATCCAGAAGTCATTTACATGGTGCTCTCAGAAGCAGATTTTAAAGTGGACAATGCGATGGATTCCCTTTTGGAGCTGTCAGATGCTGCTGAGGTCGTAGCTCCACCCCCTCCTCCTGTCTCAGGCTTTGAGCAGGCAGCTGCTCTCCTGGGAACAAACGCCTCTCAAGCAGATCCCCTCAGTGGAACGGCGCAGAGCTTCACTTTTTCAAACCAGCCTGCATCTCAAGCAGAGCTCAGTCCCACTGAAACATGCCTGACAGAAGAATTTGATGCTCTCATAGATGAGGAACTTCAAACACTGACGTCACAGCAGACAAAAACGAGCTCGCATCCTCTGATGTCCTCCATACCACTGTCTTCTCTGCCCCCTCCTTCTCAGTCCATCTCTCTTTCCTCGATGCCCTTTACAACCCAGACTCAGCTTCCAGCTCCCACGACTTTACCTGAGCAGGATGAGCAGGCCTCATACTCTGACCCTGGGCTCAGCGAGGCCCGTGGCGGTAGTTCACCAGTGAATGATTTAAGTTTTTGTGGGGTTCATATCCCTGAGACCAACACCTTATCTCTTGACTTTAGTCACCTAACGCTGGAGGCCAGCTCTGCTGAACCACGGCCATCAGCCTTCCAGGTTTATCGTAGACCTGATCAGCTCCGTAACCATACAGCGGCAATGCAGCATCAAGAAGCACTCCGCACTCCTGCCATGTTCTGGAACACTCAGGCTAGTGAGTTTCATCCTCGCTCTGTGGGGCCAACCTTCATCACACCTGTCATTCCTAACCCCACTGCTTGGAGCACTAACCCCATCCCTGCTGCACAGTGGTTGGCTCATGGACCTATCAGACAAGCGCCTCTGAAACCTTCTGCGACTGTACCGGAGTCGTGGACTCTGCCATCCAGGAACAGACTCAAATTGGAAGGGCAGTTGTTGGTGTTACTTAGAGGAGCTCCTGGATCGGGCAAAACCACCCTCGCCAATGCTATGTTGGCGCAGAACCCTGGAGGAGTTGTTTTAAGCACTGATGATTATTTTACTCGAAATGGACAGTATTATTTCGAGCCAAATTTACTAGGAGAGGCCCACGAGTGGAATCACCTTAGAGCAAAAGAGGCTTTTGAAAAGGGACAGTCACCCATCATAATAGACAACACCAATATGCAAAGTTGGGAGATGAAACCATATGTTGCCATGgcACAGAAACACAGATATAAGGTGCTATTTCGTGAGCCAGATACCTGGTGGAAAACTAAACCCAGAGAGCTGGAAAGGCGTACAAGACATCAAGTAACAAAGGAGAAGATCCGACGCATATTAGAACGGTATGATCGATTTGTCTCTGTCCAGAGCATCATGAATTCAGAAAGACCGGAACCAGGGCCAAGTGTTGTGGATTCAGTACAAAGAGAGACTGAGCAACCCCAACAATCTTTACACACTGGTCTCAGTCATCCTGATCTTGTTGGTGACTCTGCGTTGAACAAACTCAACACAAACCTTTCCTCATCTCTGCCTGACGTATCCTCTGTTAACCAGACTTACAGTATCATATCTGCAGGTGAGGTAGCAGGTGAAGTGGGTTCCTACAGTTCCAAGGAATCCGTCTTGTTCAATGAGAATATTTTGGAAGGGTCTGAAACTCCTCAGTCTGATCTTGATACTGAAGGCTTAGTATTAGAGCCAGATGCCTGCCTTGTGGACATGGAAACAGATTTGGGAAACTTGAGTAGCGGGACAACTGGAGAATTTGTAGTGTCAGCACATGAAACATTTCCGGAGCTGCCTGTGGCATTTTCAGAGTCCATTGCTCAGCGTGTGAGGAGGGCCAGAGTAAACGATAGAAGTGCACTAGAAACTAGTGCCATTGATCAGCCTGTGAACTTTGACCTAAGTGCTGACTCTCCAGCTCAAGATAAGGAGGAGGAATGTGAAGACGAGTCTCTTTCTGAAAACAAAGTAGTGCGGCCAGAGCTGTTGGATTTTGTTGGGGACTGGCCACTGGAATCTCAAGGTCAACGTCAAGGAAGACGTCAGATTTCAAAGAATAATACTGTTAAGAACACTGTTTTGGATTCCAGTGTTGTTGAACACAAAGATAGCACTTCTGCTGATGAAGACAAACATTCTGGTACTGATAAGctgaatacatttgaatttcAAAAACTTGTAGATCTACTGCAATGTGGAATAAGCTCCTCTCCAGGTTTTTACCACGGTCCAGCTCCAAGTAAAGAAACTACTTCCACTTCTTTCGTTGGAAAAGAGAGTAACATGAATCTGGAGACTGTGGCTTGGCCTGAGCTTCCTGACTGTGTTATGGAGAGAACATTCTCAGAGTCCAGGGATTACTCAAATTCTTCAAGTCTATCAAAACAGAGAGCAGACCCAACTGACCAGTCTAATCAGATGTCTGCTGAGAAGAACACACAGGATGAGGTTGAGCAGGAGGACAGTGTGTTGTCAGAAGATAAATGCAGATTAAGCCCAAATGTCCAAGAAACTCTGTGTTCAAAGGTTGCTGTAGACTCAGAGAGCAGTCTGGAAAGGAGAAGAGGACTTAGCCGAAGAGTGGGGAAATCTTGTAAACTGGCTCTCACCTTCACCAATCAAAGCCCTTCATCACCTTGCTCACAATCTCCTGTTGTTTCACATCTGCACCCTGATCTTACATCTACAGCGCAACCACCTTCATTGCCTGTGGAGTCATGTTCCAGTGGCTCAACCCAGACACAACCTCAGGACTTTGCCTTTCTTTGGCGAATTGACCAGAAGAAATGTTCTGAATTAGTCTCTGACTTATCTAGTtgtggtgtgtttgttttggaggGAAACTCTTCTCGTTTTACTCCAAAATCAAGTGATCAGGATTCTGCCTGCCAACAGGGAGTGCCATACCGTGTGGTCCATGAGAAGGGTTCTCAGGTAGAAGAGAAAGACTTTAGAGAATCTAactctaaaaaacaaaaccttgagATTCTGAGCCGCCATTTCAGACGTGTCTCCATTGATATTCTGGAGGACCTTTATGAAAAGTGCCATCAAGATATCGAATGGACAACCAACTTGTTACTAGATTCTGGAGAACGACTGTATAAAGAAGATGATGAGGGAGATGATGAATTGGTTCCTGAGGGAAAGTCTATAGAACAGTCAGAAACTGTGATGGGCTCAGAAAGCACCCGGGCTAGATCTGTATTTTCTGATGACTCTAGCAACAGTTCCAGAAGTATCATCAGTCTGAAGTCCCAAGAAACTAACCTTAGTGATGTTAACCAAGGTGATGATGATTGGAGTCAAGGTCCAAGTTCACAAAGTGAAGCTGAAGGATATGATGAGGCAAGCATGGTTAAGGAGAAATGTGAGCCTAAAACTTCCTTTGGAGCATTAAAACAGCTGACAGAAAGCACTGAAGGGCAACTGGAGATTACGGCAGCTAATGAGCAACAGACAGACAACACGGGTCAGCAATGTCCAGAGCAGGAAGAGGTATTAATACTAGAAGATAAGAAAGTTCAATGCCTGGAGGAAGCATTGAAGGAATGGAGTGAAGAGGAGGGAGGAGAGAAGGAAAAGGATGATGAGGACACAAGAGAAGAGGTAAATGCCATAACACAGTCACTGCTGTGTCAGATTGATGAAATGGAGCgcaaagaggaagaagagaggaaggagcaagaaagggaaagaaagagaacagCACAGGGGGGGAGGGAGCCAAGTTCAATGGATATTCAAACCTTGGAGCTAAAACTTCCAACTGAACTTGCATTGCAGCTCACTGAGCTTTTTGGACCTGTTGGTGTCAGTCCAGGTGCGTTTTCATCAGATGACTGTGCAGTGCACATAGACCTGAACTTGGCCAAACTGCTGCACCAGAAATGGAAGGATACTATTCAAGAGAAGCACAGACTGGCAGCTCTGTCCTATCAGCTATTACAAGAGAGTCCTGTCCACTGGGGTGAATTGCAGGGAAGTAAAACCAGACTGAGGGACCAATTAGGTTCGCGTGAAGAAATTCCTTTTATGGATCACTGGAGTGCATCCTGTGCTCCTGTCTCACTAAGGGACATCATGATCGAAGAGCAGGTGATGCAAGACAGCATGGAGAAGTCCAGGTCAAGTCGGAGGGACCTGGATAAGAAAGACAGTTTGACCAAGCTAAAGGAGAACCAGCTGTTTTCCATGTTCCCCACCATAGATCGACATTTCCTCAAGGACATCTTCAGAGATCACAAttACTCTCTGGAGCAGACTGAACAGTTGCATACTCTACTTGACGACGGGCCGGTCAGAAACGTAGTGGCACCCGAACCTGCCCCTCAACGTAATGGTGCACACAGAACTCCGAGCAAAGAGCGGAGATGGAAACCGAGAGATGGGGAGGTAGAAGCTGCTCAATTCCAGGATTCGGAGGATCCAGAATATGATGACTTCAAGACAGAGGCAACACTGCAGAGGCGTCAGCAGATAGAGTGTTTTAACAAGGCAGCTGAAGCTCATCGACAAGGACGAAAGGACGTGGCTAGTTTCTATGCACAACAGGGTCACATGCATGGGGACAAGATGCGTGAAGCAAATAACCGAGCAGCCATGCAGATATTCCAGAGAGTGAATGCTTCACTTCTGCCTCAGAATATTCTAGATCTCCATGGACTGCATGTGGATGAGGCCATTCATCATCTTGGTCAGGTTCTCGCAGGCAAGAATTTAGaattcaGCCAGGGTTTGTGTCAGCCTCAGATGTCAATCATTACAGGAAGAGGCAATCGCAGCCGGGGAGTGGCGCGCATCAGGCCTGCTGTACTAGACTACCTCAAAAATCATCACTACAGTTTTTCTGAACCTAAGACTGGATTGGTGTTGGTCACACTTCATAAAGAGCTGCTACAATGAAGcatttaattaagatttttctCTTCCCACTGCCTTAATCCAAAGTGTCTTCTCTGTAGACTAATAGTGCCAGTAATTATAGAAcagtattttcatgtttttctgtaATTGGGCACAAA

Function

symbol description
n4bp2 Predicted to enable ubiquitin binding activity. Is expressed in axis; floor plate; and hypochord. Orthologous to human N4BP2 (NEDD4 binding protein 2).

NR:

description
PREDICTED: NEDD4-binding protein 2-like

GO: NA

KEGG:

id description
K15720 N4BP2; NEDD4-binding protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043243467.1 True 5346 mRNA 0.47 20 13190665 13201536

Neighbor

gene id symbol gene type direction distance location
ube2kb ube2kb,LOC100708886,LOC108261162,LOC105026169,LOC107088242,LOC102229303 coding upstream 23066 13161823 ~ 13167599 (+)
lias lias coding upstream 43296 13141579 ~ 13147369 (+)
si:dkey-92j12.5 LOC107757600,LOC107709437,LOC107709438,LOC107548306 coding upstream 66930 13085849 ~ 13123735 (+)
gtf2e2 gtf2e2,LOC107671915,LOC107548363,LOC107750445,LOC107702408 coding upstream 212995 12966765 ~ 12977670 (+)
zmynd10 zmynd10,LOC107702405 coding upstream 285376 12899626 ~ 12905289 (+)
chrna9a LOC107660492,LOC107757584,LOC107700259,LOC107548308 coding downstream 9058 13210594 ~ 13216696 (+)
haspin LOC107695683,LOC108416162,LOC107722281,LOC107580791 coding downstream 188566 13390102 ~ 13398726 (+)
ncapg ncapg,LOC107700299,LOC107757563 coding downstream 221496 13423032 ~ 13434220 (+)
mab21l2 mab21l2,LOC107700304 coding downstream 455318 13656854 ~ 13659110 (+)
rps3a rps3a,LOC107695588 coding downstream 582279 13783815 ~ 13786613 (+)
G2995 pds5a,LOC107700294,LOC107757607 non-coding upstream 18732 13170087 ~ 13171933 (+)
G2967 NA non-coding upstream 34868 13023428 ~ 13155797 (+)
G2981 NA non-coding upstream 66070 13123872 ~ 13124595 (+)
G2948 NA non-coding upstream 253195 12936577 ~ 12937470 (+)
G2918 NA non-coding upstream 316996 12794867 ~ 12873669 (+)
LOC122348541 NA non-coding downstream 92581 13294117 ~ 13295055 (+)
LOC122334852 NA non-coding downstream 95336 13296872 ~ 13300061 (+)
G3077 NA non-coding downstream 98583 13300119 ~ 13305686 (+)
LOC122350991 NA non-coding downstream 100465 13302001 ~ 13310359 (+)
LOC122351005 NA non-coding downstream 110558 13312094 ~ 13315805 (+)
dnah6 dnah6,LOC106610484 other upstream 466207 12659262 ~ 12724458 (+)
kdm4c kdm4c,LOC107702398,LOC107548355,LOC107570226,LOC107655842,LOC107750465,LOC107709452 other upstream 532158 12644679 ~ 12658507 (+)
LOC122350793 zbtb5,LOC107656143,LOC107702373,LOC107591545 other upstream 1346605 11837606 ~ 11844060 (+)
tmem192 tmem192,LOC107754158,LOC107551580,LOC107656254,LOC107591541,LOC107702369,LOC107750450 other upstream 1407595 11773956 ~ 11783070 (+)
fbxo10 fbxo10,si:dkey-245p14.2,LOC107656048,LOC107702368,LOC107754157,LOC107591540,LOC107750413 other upstream 1465765 11711940 ~ 11724900 (+)
rhoh rhoh,LOC107548321,LOC107598269,LOC107757583 other downstream 1523 13203059 ~ 13205716 (+)
slit2 slit2,LOC107700301,LOC107695646 other downstream 314672 13516208 ~ 13585981 (+)
G3187 gatb,LOC107695556,LOC107695902 other downstream 912895 14114431 ~ 14118433 (+)
LOC122345399 NA other downstream 1278662 14480198 ~ 14481346 (+)
lrata lrat,lrata,LOC107572197,LOC107714634,LOC107695864,LOC107700276,LOC107757590 other downstream 1400776 14602312 ~ 14603888 (+)

Expression


Co-expression Network