G104780 (cyp2y3,LOC107689291,LOC107551273,LOC107718919)


Basic Information

Item Value
gene id G104780
gene name cyp2y3,LOC107689291,LOC107551273,LOC107718919
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 8401270 ~ 8415768 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU154718
TGGCTTTAGCAAAttgattagttttatttgatcagttggaaaatcaaatatttaatcaattacaGCTTGGCATAGTTCTTTTGGCACTAACAcaaatataatactattattttgtctttatctTAACCCTTATTCACTTTTCACAAGACAAGGCACAAAATGATTCTATATACAGCACATTTTATAAACAGCAGTAATTCAATTATACTTTAACTGGCAATGCAGGATGACCCAGAGATAGGTGGCCTGAAATGTTCAGTGCTTCTTCAATATTCTTAAGCCTGTGCTCAAAGAGAACTACTGAACTATGGTATGAATGTGAAccatcaaagaaaaacatttttgtaaaatgagaCAAGGTGCAATATCTCTGTTGCTCAGCGGGGAGAGGCAATAAGATCATAGAATCGAGGCATGTTTGCAAAGCTGCTGAGTTCAGGACTGGGGTCTACTCCATCTCGCCCCTTTGGACTACTAAAACTGAATCTCTGAAGCAGAGACACGATGAACAGAAAGAGCTCCATACGAGCCAGAGACTCACCCACACAAGAGCGTTTACCTGCAGAGACACAAGACATAGCTGCAGAAAAGGGCATAAAAGCTGGATTCTTTTTAAAGTTTCCATTGGCATCCAGAAAGTGCTCTGGGTTAAAGGTCCAAGGGGTTTCCCATTGTCCCTCATCTCTTAAGACAGAGTGCAACATGGGAATAATGACTGTGCCCTGGGgaaatataaaattcatttaaatgtacacacaaTTACCAGATTGAGTACAAAGCATTGACAAGagattattagaaaatattttgtgacattttgtaATAGTCGCCATTGGACAATATAATCTAGTACTATCTCAGAAGTTGACCACTGCATGTGTTCATTCTTACCTTTGGTATTGTGTGACCTCTAAATGAGATGTCACATGTGGCATAATGGGGAACATTTAGTGGCACAATGTCCAGATAGCGCTGTACTTCATGTATAACAGCATCAGTGAAGGGGAGAGACTTCCTGTCATCCATTGTAGGGATTCTATTCTGTCCAATAACCCTGTCAATCTCCTTCTGCATTTGCTctgaaatatatcaaaatgtcatTGATGTTCTTATATATGTTCAACAATTGTGGACTaaataatagtaacaataaaaaagtctagaaaaaaatgttcaccagataaaaaaatagcttCACCAGATAAAAGATGCTACAATACGTTTAACATTTACTTGAACAAGATTATTTGAAATCTGACGTCTTAGTCTTCATGTGTACACACTGTCTGTAGACTGAGGACTGTGATTCATAGTATTGTAGTGTGCACTTAACAGTAAGGAGGGTCATACCCTGTATATGAGGGTGCTTGATAAGAAGCATCAGGGCGTATCTGAGAGTTGTGCTGGTGGTCTCTGTGCCAGCTACGAACAGATTCAAAACAGTCCCCAGCAAGTTATCTTTGTGGAATTCTGTGTCAGGATTGTGTTTGTCCTGTTGTAGTACAACAATGAATCGTACACTTTGTTGAATGCCAAAcaataatgtaaatttaataCTTCAGAAAAGAAGAACATCCAAAGAACTTTTTTGCTTTCGATACCTGTCTGAGTTTGAGAAGAAAGCAGTCAATAAAGTCCTTTGGGTCATCAAAATCCAAAGTTTTCTCATGTTCCTTGATTTTTTTTGAGATGAAGGCTTTAATGTCTTCTACCTCTTTAAGCATGGCATGATGTCTGCCAGGCAAGAGTTGCATTAGTTTAGGGAAGACGTTGTACAGCTGTTTTGGATGAAAAATATAGtgaagtatttaaatattatttaaatatcgaCCATGTTACTAGTTGTCAGCCAATTTGCTAGCATGCTTTTATcagtttatcatttatttcaaaagccCTTTTAGCAACCTGCTTCCTTTTCCTTTCAACTTGAAAGGATATTTTGGGATTTCTAGAGCTCGTCTTTCTTCCTCCATCACATATCCCAGACTGTCTGCTCACCTGACCCTGGGGGCTGCTGATAAAACGCAGAAGTCTGGAGATGATCTGCAGCAAGCCCAGGAAATCTTTGTCTTCATAATCAAAGCGCTGGCCAAACACCAGTGAACAGATAACGTTGGACACCGCCCGGCTTGTGAAGAAAACCGGGTCAACCGGTGTCACTGAAGGAGATAAACATTAACATTCTCATTCTGAATGCAGAACTTTCAACATAAGCAGATGATATTTTTCAGTCCTCACATTTGGTTTCCTCGAAGCTCTTCAGCAGATGTCTGCTCTCTTCTTGAATCCACTGTTCCATTCGTTTGCGTCCCATTCCGAAATCCCTCAGTGTAGTGAGAGTGAACCTCCTCAGCTGACGCCAGCGATCTCCATTACTGATGACCAGTCCTGCAAACAGGGAAGTGATATCGGAATTTAGAACAAACTTCATTAGACTGACAACATCtgtctgacaaaaaaaagcattaatctCACCGTAGCCTCTCAGAATTTGGAATATAAAGGGAATGGGTGCTCGGCCAGTAAAGTCTTCTGCCTGGTCCACCAGAGCCTCTTTGACTGTATCATAACCGACCAGAACCACCATTCTCTGAGACCCGATGTACACCGTCATCACAGGCCCATAGGTTTTACTCCATTCATAAAGCTTTTAAAGGGTGCACGCTTATCCAGGATCAGTAAGTTTCCAATCAGTGGCAATGCCAGTGGACCCGGGGGCAAAGAAAGTCTACTCTCCTTCCTCTTCCACCAGACCATCATCAACACAGTCAAGACTAAAACCAACACCAGTGAGCTAGACAGTTCCATCTCTCCtctgtaaaatgttgtttacagcCCAGTTTATGcctttctgtgttttctctgttccATAAGTGTTTGTTCTGTGTTCTCTACAGAGCAGTCAGGAGCAGCTTCAGCGTGAGGGAACAGAGGTAAGCCATGGGTCAAATACCTCTTGTGCACTTTA
>TU154719
CTAATAGCGTACAAGATTCACTTTTTGAAACAAATGGACTTTCCCTAGATATCAAATTTTTTTTGGCACATACTGTACCTGtatacatgcatttgcatttatatatgcacacacacaaacacacacgcacacactcaaaAATGCAGACAAATAGTCCTTTTACCTGCATAAAACTTTTAAAGGGCGCACGCTTATCCAGGATCAGTAAGTTTCCAATCAGTGGCAATGCCAGTGGACCCGGGGGCAAAGAAAGTCTACTCTCCTTCCTCTTCCACCAGACCATCATCAACACAGTCAAGACTAAAACCAACACCAGTGAGCTAGACAGTTCCATCTCTCCtctgtaaaatgttgtttacagcCCAGTTTATGcctttctgtgttttctctgttccATAAGTGTTTGTTCTGTGTTCTCTACAGAGCAGTCAGGAGCAGCTTCAGCGTGAGGGAACAGAGGTAAGCCATGGGTCAAATACCTCTTGTGCACTTTA

Function

symbol description
cyp2y3 Predicted to enable heme binding activity; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen; and steroid hydroxylase activity. Predicted to be involved in exogenous drug catabolic process; organic acid metabolic process; and xenobiotic metabolic process. Predicted to be active in cytoplasm and intracellular membrane-bounded organelle. Is expressed in several structures, including EVL; pectoral fin musculature; periderm; visual system; and yolk syncytial layer.

NR:

description
PREDICTED: cytochrome P450 2G1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154718 True 2971 lncRNA 0.40 3 8401270 8404762
TU154719 False 494 lncRNA 0.42 2 8401270 8415768

Neighbor

gene id symbol gene type direction distance location
LOC122358760 LOC107551275,LOC107750107,LOC107720462,LOC107572376,LOC107689293,LOC107663740 coding downstream 19773 8352330 ~ 8381497 (-)
med17 med17 coding downstream 377094 8018401 ~ 8024176 (-)
trim59 trim59 coding downstream 402043 7995583 ~ 7999227 (-)
ift80 ift80 coding downstream 421724 7960083 ~ 7979546 (-)
si:dkeyp-97b10.3 LOC107750093,LOC107551284,LOC107702998,LOC107701299,LOC107720419,LOC107577739 coding downstream 450058 7934255 ~ 7951212 (-)
trappc6bl trappc6bl,LOC107678240,LOC107684201,LOC107758819,LOC107749664,LOC107561377 coding upstream 113768 8529536 ~ 8533296 (-)
si:ch211-116o3.5 LOC107684197,LOC107561376,LOC107758471,LOC107678253,LOC107749643 coding upstream 117930 8533698 ~ 8539752 (-)
LOC122359137 pnkp,LOC107561379,LOC107758514,LOC107672387,LOC107749649,LOC107678254,LOC107560617 coding upstream 347275 8763043 ~ 8769975 (-)
si:dkey-243k1.3 si:dkey-243k1.3,LOC107672362 coding upstream 359877 8775645 ~ 8779441 (-)
dpf1 dpf1,LOC107672425,LOC107561370,LOC107749650,LOC107678238,LOC100004713 coding upstream 440800 8856568 ~ 8909306 (-)
G104777 si:ch1073-83n3.2,LOC107689292,LOC107551274,LOC107720429,LOC107572377 non-coding downstream 4941 8390340 ~ 8396329 (-)
G104769 NA non-coding downstream 71048 8329329 ~ 8330222 (-)
G104766 NA non-coding downstream 74848 8322192 ~ 8326422 (-)
G104733 NA non-coding downstream 118725 8280917 ~ 8282545 (-)
G104757 NA non-coding downstream 121586 8279142 ~ 8279684 (-)
G104794 NA non-coding upstream 80624 8496392 ~ 8496606 (-)
G104808 LOC107758751,LOC107672361,LOC107758746,LOC107561373,LOC107672380 non-coding upstream 170860 8586628 ~ 8678323 (-)
G104812 clca4,LOC107749647,LOC107678235,LOC107678236,LOC107749648,LOC107678237 non-coding upstream 179909 8595677 ~ 8702042 (-)
G104809 LOC107672361,LOC107758746 non-coding upstream 300627 8716395 ~ 8728987 (-)
LOC122359047 NA non-coding upstream 616831 9032599 ~ 9038328 (-)
nipsnap2 gbas,LOC106581053 other downstream 350560 8044822 ~ 8050710 (-)
G104695 LOC107750114,LOC107701289,LOC107702996,LOC107720420,LOC107570341 other downstream 443039 7957836 ~ 7958231 (-)
G104628 NA other downstream 760931 7639644 ~ 7640339 (-)
G104603 LOC107703035,LOC107750119,LOC107551239 other downstream 829180 7569846 ~ 7572090 (-)
mmp28 mmp28 other downstream 1281984 7111256 ~ 7119286 (-)
zgc:114130 zgc:114130,LOC107758457,LOC107749642,LOC107678256,LOC107560624,LOC107684198,LOC107561367 other upstream 94614 8510382 ~ 8513459 (-)
LOC122359140 pnkp,LOC107561379,LOC107758514,LOC107672387,LOC107749649,LOC107678254,LOC107560617 other upstream 241920 8657688 ~ 8662864 (-)
LOC122359046 camkk1b,LOC107758636,LOC107592750,LOC107752383,LOC107694030,LOC107582651,LOC108410854 other upstream 623128 9038896 ~ 9046115 (-)
G105022 LOC107672415,LOC107582616,LOC107588772,LOC107694024,LOC107752388 other upstream 1018658 9434426 ~ 9436797 (-)
G105059 NA other upstream 1136866 9552634 ~ 9555787 (-)

Expression


Co-expression Network