G104808 (LOC107758751,LOC107672361,LOC107758746,LOC107561373,LOC107672380)


Basic Information

Item Value
gene id G104808
gene name LOC107758751,LOC107672361,LOC107758746,LOC107561373,LOC107672380
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 8586628 ~ 8678323 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU154749
TCTAAGTCTACAGAggcaaaatgattgatttgtgaGAGAAATAAACAAGATCAACGTCTCCTTCAAACACGTGACTACTTAATAATATGACAAGTAACTTAAGTGAATATTAAAGTTGGCATGGTTGAAGAACAGGACTGAATACTGGGGCTACACAGGTGAGTAGATGGGTTACTCCTtttgtatgtaatataaaatattgctaaGCAGTTCttatgcaaataatatataGTAGTTTTAGTAGTAGCAAAACTGTGTTTGGTGTGAATgactgtcacggtgtggtttgcgagaaggagcactcaacgagaaaaataaacttaaacagttctAATCCTCTACAAAcgaacaaaataacaatatagttGCGAgcaggtaggcaggcagacaggacaaaaaaaaaaacccatgcaTTAAAGACGAGAACAGCAGTAAACTGGAAcctaaatacacacaggaattgactaaattaacaaaacacagctgaagacaattagacaattaacagaaagtaggtcacactgaacacatgggagaagacaaaacaacaacaaaagactcCACATGTGTGACAATGGCAACtagtaatacaaaaatataacttttttagctgcattaaaatgttttttatatgtaGTGTGCATATAGTAGTTGAGACGTGTATATATTATAGGTATTTACATGATTCTGAAGTGGAATAATGACATatttgatatatgatatattttgcttaaaagATACCAATAATTACATAGTCATGTTCAAATTAGGCGCAAGAACTGATTTGACACTTATTTGCCATATATCTTTTGAGCAGAGCGCTTTCTGCGTTCATTGCTAATATGACTACAGCAACAATAAAGCACATGAGCATAGTTACCACACACAGGGAAATAACAAGAACCGTCAAATTAATGTCTGGGTCTGATATTTTTGAAGCAGGAGGATCTTTGAAGCTTGAGCAATGTTGGAGGTTTCagatttagctttttgtttgtcCTCCGACTGAATTGCAAAGAAGAGCGTGGTGCCATTTTGGATTGTAATATTAAGATTGAATGAATGTTGTTCAACTGATCCAGCCTCCAGAGGTGAGATATCAGTTGTGTTTACTTCTTGACTATTGCTGAAGTTGAATTTAAGCATGTTAAAGTCAAAGCTCCACCTGATCCCATAGGATTTAG

Function

NR:

description
PREDICTED: calcium-activated chloride channel regulator 4A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154749 True 1184 lncRNA 0.35 2 8586628 8678323

Neighbor

gene id symbol gene type direction distance location
si:ch211-116o3.5 LOC107684197,LOC107561376,LOC107758471,LOC107678253,LOC107749643 coding downstream 46876 8533698 ~ 8539752 (-)
trappc6bl trappc6bl,LOC107678240,LOC107684201,LOC107758819,LOC107749664,LOC107561377 coding downstream 53332 8529536 ~ 8533296 (-)
LOC122358760 LOC107551275,LOC107750107,LOC107720462,LOC107572376,LOC107689293,LOC107663740 coding downstream 205131 8352330 ~ 8381497 (-)
med17 med17 coding downstream 562452 8018401 ~ 8024176 (-)
trim59 trim59 coding downstream 587401 7995583 ~ 7999227 (-)
LOC122359137 pnkp,LOC107561379,LOC107758514,LOC107672387,LOC107749649,LOC107678254,LOC107560617 coding upstream 84720 8763043 ~ 8769975 (-)
si:dkey-243k1.3 si:dkey-243k1.3,LOC107672362 coding upstream 97322 8775645 ~ 8779441 (-)
dpf1 dpf1,LOC107672425,LOC107561370,LOC107749650,LOC107678238,LOC100004713 coding upstream 178245 8856568 ~ 8909306 (-)
numbl numbl,LOC107561381,LOC107672402,LOC107560628 coding upstream 245008 8923331 ~ 8947415 (-)
coq8b coq8b,LOC107678251,LOC107749653 coding upstream 285181 8963504 ~ 8972321 (-)
G104794 NA non-coding downstream 90022 8496392 ~ 8496606 (-)
G104780 cyp2y3,LOC107689291,LOC107551273,LOC107718919 non-coding downstream 170860 8401270 ~ 8415768 (-)
G104777 si:ch1073-83n3.2,LOC107689292,LOC107551274,LOC107720429,LOC107572377 non-coding downstream 190299 8390340 ~ 8396329 (-)
G104769 NA non-coding downstream 256406 8329329 ~ 8330222 (-)
G104766 NA non-coding downstream 260206 8322192 ~ 8326422 (-)
G104809 LOC107672361,LOC107758746 non-coding upstream 38072 8716395 ~ 8728987 (-)
LOC122359047 NA non-coding upstream 354276 9032599 ~ 9038328 (-)
G104922 NA non-coding upstream 461735 9140058 ~ 9140422 (-)
G104936 NA non-coding upstream 556547 9234870 ~ 9235087 (-)
LOC122358921 NA non-coding upstream 586172 9264495 ~ 9295511 (-)
zgc:114130 zgc:114130,LOC107758457,LOC107749642,LOC107678256,LOC107560624,LOC107684198,LOC107561367 other downstream 73169 8510382 ~ 8513459 (-)
nipsnap2 gbas,LOC106581053 other downstream 535918 8044822 ~ 8050710 (-)
G104695 LOC107750114,LOC107701289,LOC107702996,LOC107720420,LOC107570341 other downstream 628397 7957836 ~ 7958231 (-)
G104628 NA other downstream 946289 7639644 ~ 7640339 (-)
G104603 LOC107703035,LOC107750119,LOC107551239 other downstream 1014538 7569846 ~ 7572090 (-)
LOC122359046 camkk1b,LOC107758636,LOC107592750,LOC107752383,LOC107694030,LOC107582651,LOC108410854 other upstream 360573 9038896 ~ 9046115 (-)
G105022 LOC107672415,LOC107582616,LOC107588772,LOC107694024,LOC107752388 other upstream 756103 9434426 ~ 9436797 (-)
G105059 NA other upstream 874311 9552634 ~ 9555787 (-)
dynll2a dynll2a,LOC107554284,LOC103397138 other upstream 1085548 9763871 ~ 9796923 (-)
atf5b atf5b,LOC107582581,LOC107597512,LOC107717185,LOC107659920,LOC107701416,LOC107713463 other upstream 1834308 10512631 ~ 10514062 (-)

Expression


Co-expression Network