CI01000001_02578747_02580442


Basic Information

Item Value
gene id CI01000001_02578747_02580442
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 2578579 ~ 2580493 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_02578747_02580442.mRNA
GTATAAAAATCGGAAAAGTGAATTTACTGCCAAGAAGCATGAGTAGAACGTCTGTCACATTATAACAATTTACACTGCAATCGGTAAGAAAAACACCCACAAGTATGTTTCTCATAAAACATTATTGTACATCAACCACATTTATAAAAAGGAACCGAGTTCACAAAAATGCAAACCTTAACTTCTGACAAGAAACACCCCAACAATTCAATTCAAAACCTGAGAGTTCATGTGGTACCACTAAAACACAGAAAACAGTATATACATATGATAAAACGCTATATTCGTGAGAATGGAGAGGAGGACAGTTACAGACAATCTGATCCATATAGTAATCTGCATTATTGTGCTATTAACGGCATACAAAAACATGATCAAGCAAGATATGAATATGGAGACAATATTGTTAAAGATTCACTCAAGACTAAGGGCCATTTACAAGTCAGTTACATCATAATATGACAAATAGCCCATATCTGACACCATTTGGGCTTGTGTTATTAGCAAACAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_02578747_02580442.mRNA True 513 mRNA 0.34 3 2578579 2580493

Neighbor

gene id symbol gene type direction distance location
CI01000001_02567315_02569427 TUBA1C, TUBA1B, TUBA1A, TUBA1A.S, TUBA1D coding upstream 8974 2566675 ~ 2569605 (+)
CI01000001_02526729_02544932 JPH2 coding upstream 33593 2526729 ~ 2544986 (+)
CI01000001_02505727_02507172 MFSD5 coding upstream 71222 2505395 ~ 2507357 (+)
CI01000001_02492831_02495337 NA coding upstream 83168 2492431 ~ 2495411 (+)
CI01000001_02393859_02406849 CALCOCO1A coding upstream 171344 2393859 ~ 2407235 (+)
CI01000001_02591835_02593987 TMEM18 coding downstream 11342 2591835 ~ 2594330 (+)
CI01000001_02632096_02633641 NA coding downstream 50666 2631159 ~ 2634993 (+)
CI01000001_02657735_02658754 NA coding downstream 76954 2657447 ~ 2660601 (+)
CI01000001_02666739_02671962 FBXO25 coding downstream 85976 2666469 ~ 2672408 (+)
CI01000001_02708472_02723568 CMTR1 coding downstream 127979 2708472 ~ 2724009 (+)
G13973 NA non-coding upstream 765 2577519 ~ 2577814 (+)
G13971 NA non-coding upstream 13272 2564734 ~ 2565307 (+)
G13869 NA non-coding upstream 138487 2425601 ~ 2440092 (+)
G13924 NA non-coding upstream 197439 2380892 ~ 2381140 (+)
G13922 NA non-coding upstream 210368 2367979 ~ 2368211 (+)
G14555 NA non-coding downstream 392366 2972859 ~ 2973084 (+)
G14597 NA non-coding downstream 497697 3078190 ~ 3078503 (+)
G14752 NA non-coding downstream 735660 3316153 ~ 3316434 (+)
G14753 NA non-coding downstream 736728 3317221 ~ 3317458 (+)
CI01000001_03306094_03325686 NA non-coding downstream 745584 3305894 ~ 3327549 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 907575 1667762 ~ 1671167 (+)
G13051 NA other upstream 1533427 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 2086522 483853 ~ 488825 (+)
G12614 NA other upstream 2267638 309144 ~ 310941 (+)
CI01000001_03618075_03620436 NA other downstream 1035755 3618075 ~ 3621451 (+)
G15794 NA other downstream 2480725 5061218 ~ 5064704 (+)
CI01000001_05279884_05287123 NA other downstream 2706256 5279837 ~ 5287698 (+)
G15995 NA other downstream 3131392 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 4952079 7531541 ~ 7540586 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_022525 NA non-coding NC_007134.7 CM002907.2 35663852 ~ 35669221 (-)