CI01000001_08714618_08721009


Basic Information

Item Value
gene id CI01000001_08714618_08721009
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 8714618 ~ 8721182 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_08714618_08721009.mRNA
CAATGTGTGGAGGAGCTCGTGTTGAACGGCATTGATGCTGGAGCAACATGTGTGGCTGTCAAAATAGACATAGAAGCCTGCAAGCTGCAGGTGATCGACAATGGTACAGGAATGTGCCGGGAGGACATGGAGAGAGTGGGATTGCGATACAACACGAGTAAATGCAGCTCGCTGGAGGATCTGGATAATCTCAGATTTTTTGGATTCAGAGGGGAAGCGATTTCCAGTATTGTCTCCCTTGCAGAAATGGTTGAAATGTCATCTAGGACTAAGCTGTCGGTGAAAACATACGTTAAAACCTTCAATGAAGCAAATGCATCGGATGTTTTTGAAGCTCAAACCGTTCGACCCTCCGCAGGGACGACCGTGACCGTCTACAATCTCTTCCACAACATGCCAGTCCGAAGAAAGAGAATGGATGCGGTTTTAGAAACCGAACGCATCCGTCAGAGAGTGGAGGCCATATCTCTGATGCACCCATCTGTGTCATTCACAGTGAAAAAAGAAAATTCGGCTCACGTGATGGTGCAGCTCTCTAAAACAAGTAGTACCTATTACAGGTTTGTGCAGATTCATGGCTTGAATCGAGCCCAAAAGCTCGGAGAGGTCAGTTACGTCCATGAGCAGTTCGAAATGACCGGTCATATCGGCCGTGAAGGTCATTACAATAACAGCTTGCAATTCCTATTTGTAAATGGGAGGCTTCTTCTGAAGACACGCATTCATAAAACGCTCAACAGCCTTCTGAAGAGAGTAAGCAGTGCTGCGAGACAAAACAACAGCCCAACTGCATATCCGTTAACATCGAGCCCCAAACAAAGGGGCGGATGTGATCTCCATGGCGTCTATGTCTTAAATATCAAATGCCATTACTCAGAGTATGACATATGCCTCGAACCAGCCAAGTCCCTGATAGAGTTCAAAGACTGGGATAATGTGCTCATCTGCATTGAAGAAGGAGTAAAAGCATTTCTTACTAAGGAAAATTTGGTGACAGAGTTTTCCATGAATGGCAGCGATGGTCCATCAAGTAGTCCATTGAGGAATGCAAAGACTCCTGCGGCAGAACAAAACCTCAGTGCTGAGGAAACACATGAAGCGTGTGACGCACTGACTGAGAAGAAGGATAATGCAAGTGGTGTGGACGTCTCTGGTGGTGTTCAAATGTTGGAGCAAGTGTCAATAAACACCAAAACCTTCGCCAGTGAAGAGTCAGACACTGAAAAAGCTCCTCATTGTGGGGATTTGCCTTTGCAGACCACAATCGCATTTGCTACAGAAATGAATAACAACCGCAAAGAAGATGAAAATGCAATTTGTCCAAATATAAGCCATAATGATTGGTCAGTTACTGTTAACGACAACAACATAAATGTGATGGGAAGCAAAAACCACAAGATTTCAATTCTGGATGTAAAAGGGGCGCAAGATAGTTTAAAAAAATTCTGCTTCCCCAATAAAATCTCTCCAAAAAAGAGAAAGTTGCCATTAAATGACATTGAAGAAGACAAACATGTTGTTTATGGTACAAGCTCAAAGACTTGCAGAGCTGCTCAAAGTCGTAAATTAACCATGTCTTTTGAAACAGGATCTCTTGACAAGTTCAAAAGGTTGTTTGGGAAGGATGCTGAAAAAAAACAACCAAGTACGGAAAAAACAAGCCTTTTACAACCAGAATCCTCTAGAAAATCCAATGACTGCTTTGTAGGATCTACTTTGTGCTTAGATGATTTAGACAAGCCCTTATTGAGGAACATTTCAGATGCTCATTCTCCATATAATTCTGAATGTTATGCAGTATCTTCACCGTGGAACAAGGGAGAAAAAATATCATTGGCTGCCAAATGTTCCAACTTAAAACATGACAAAATGGCATTCAAAGAAGTCAGCAAAGACTTTCTTACTATGGAAAACTTGTCTTTTCCAGTTGTACAAGACTCACACTTTGAAGAAAATTCCTGTGAATTAGAAAAAAGCCTCTTAGAAGAAGATGTTTTATTTGGATCATCTGGAACTTTTGATTCAATTGTTCATGATTCTTCTAAAGACTTTCCAGTCTTGGATCTGATTGAGCAGGACAATACCTTCAAGCAAGCAACAATACCTTCCTCTATTTTAGAAGACTCGCATCTCTGCAACAAGAATGTGACTTCCTTTTTGGGAAGTGTGAGCCGTGTTGATGAAGCCAGCGTAACCTCTCAGCATGATCCTCTGTGCAGCGACACAGGAAATGAAGGTCAGACTACAAATGAAAGTGTTGAAACAATCCCAATGTCCAGCAGCTGGCTGGCTCATTATGACAGTTGCTTAGGAAAGCTGGTTTACATAAACCAAGTTACAGGGCTCAGCAAATATAACTCTCCTCCTGTGGAGGAGACTCAAGTGCCATGTACCACAGATGTCACTAACATGGCAGTCAGTGTTATTTCAAAAACAGGATTTGAGTACAGGTGTTATCCATTTCACACAGACATTGTACTTCCCTTTCTGCCCAAGCCCAGAGCAGAAAGAGCTCTTAACTCAGGGACAGACAGCAGAGAGGATGCCCAAGGTCCCGATTCACTGTCGACTTTATTCTCAGAATGGAGTAATCCAGTGTTCATACGGCCTCCAGAGGTTGCTGTGGATGTAACCAGCGGTCAAGCTGAGGGTCTTGCTGTAAAAATACACAATATTCTTTTCCCCTACCGGTTTACCAAGAATATGATCCACACAATGAGAGTCATCAATCAAGTGGACAAGAAGTTCCTTGCTTGTTTAATAAATACAACAGAGCAGGACATCTCTGAAAGCAGTACAAATGAAGGAAATCTCCTAGTGTTGGTTGATCAGCATGCTGCCCATGAAAGAGTTCGACTGGAGGGGTTGGTAACAGACTCTTATGAGGATGATCCAGACACACCTGGAAAAAAGAGGCTATGTTCTTCAAGTGTAACCCCACCCTTGGAGATTAATGTAACTGAAGAGGAATTGAGACTTCTGAGGTCTTGTCAGGCCTTCCTGAGGGGTCTTGCTTTAGATGTAAGTTTCCCAAATAGTGAGTCACTGAATGTGTTGTTGCAGAGACTTCCCACATGTTTCATAGAGAAAGAAAGCACAGAGATCCGCCGTGGAAGGCGGTCCGTAATTAAAACCATTGCAGAGGACTACCTGCGAGAACACATTGAGTGTGCTCATGGAAGACCTTCCATCGTCCCTCTGGCAGATCTTCACCACTTAGAAGATCAACAGAGTTGCTGCCAACAACAACTGCTCTGGGATATTGTAGCCAATAATAAAGGACTATACTCGATCGTGAAGTATTGTCCTCGAATCAAATGGTTCCTTACAAGGTTGTGGTCCAATCAACGTAAACGTAGGAGGGCGCTAAAATGGATGACGTTCCTACACAGAGCTCATTGTTAGTACATTGCCTTGATCGGTGGAAGGGGCAGCAGGAAGATCTCACATAAACGTTAACAAGTATTACTCCATAGGTGAGTTTTCACGTAGAAATTATATATTATAACGTACAAAAACAGTTTTAGACTAAAACGATGGTATATATTGATTAATTATATCAATTTTGGTGAGTTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_08714618_08721009.mRNA True 3578 mRNA 0.43 11 8714618 8721182

Neighbor

gene id symbol gene type direction distance location
CI01000001_08667814_08671039 NA coding upstream 43179 8667654 ~ 8671439 (+)
CI01000001_08540376_08551579 CLCNK coding upstream 162893 8539903 ~ 8551725 (+)
CI01000001_08444733_08450428 NA coding upstream 263694 8444733 ~ 8450924 (+)
CI01000001_08427984_08438912 NA coding upstream 275188 8427984 ~ 8439430 (+)
CI01000001_08365139_08380569 PTPN11B coding upstream 333924 8364229 ~ 8380694 (+)
CI01000001_08721737_08727450 KANSL2 coding downstream 555 8721737 ~ 8727787 (+)
CI01000001_08748236_08757869 NCKAP5L coding downstream 27054 8748236 ~ 8758003 (+)
CI01000001_08785318_08810381 FAM132A coding downstream 64136 8785318 ~ 8810381 (+)
CI01000001_08841482_08845223 OLFML3A coding downstream 119680 8840862 ~ 8845633 (+)
CI01000001_08934325_08940532 KLHL21 coding downstream 212825 8934007 ~ 8941354 (+)
G17411 NA non-coding upstream 89117 8625283 ~ 8625501 (+)
G17408 NA non-coding upstream 91294 8623103 ~ 8623324 (+)
G17405 NA non-coding upstream 92778 8621511 ~ 8621840 (+)
G17403 NA non-coding upstream 94429 8619893 ~ 8620189 (+)
G17402 NA non-coding upstream 97834 8616581 ~ 8616784 (+)
G17394 NA non-coding downstream 40287 8761469 ~ 8763538 (+)
G17422 NA non-coding downstream 52646 8773828 ~ 8774069 (+)
G17423 NA non-coding downstream 62723 8783905 ~ 8784187 (+)
G17439 NA non-coding downstream 101693 8822875 ~ 8823109 (+)
G17234 NA other upstream 682135 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 1174032 7531541 ~ 7540586 (+)
G15995 NA other upstream 2999667 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 3424662 5279837 ~ 5287698 (+)
G15794 NA other upstream 3649914 5061218 ~ 5064704 (+)
G17353 NA other downstream 494840 9216022 ~ 9228859 (+)
G17354 NA other downstream 513281 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 697146 9435836 ~ 9436373 (+)
G18896 NA other downstream 1518718 10239900 ~ 10241492 (+)
G18873 NA other downstream 1535930 10223879 ~ 10260714 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_021692 mlh3 coding NC_007134.7 CM002907.2 24589633 ~ 24598877 (+)