CI01000001_08841482_08845223 (OLFML3A)


Basic Information

Item Value
gene id CI01000001_08841482_08845223
gene name OLFML3A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 8840862 ~ 8845633 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_08841482_08845223.mRNA
GTATAAAGTTGCATGTATGAGATCATGTGTGCATATGTAGCCACCAGACTGTAATAGTCTTAAAAATAAAGGTTCTTTATTCGCATAAATGGTTCTATTTTTTAACTTCCATGGAACATTTCCATTGCAAAAAAAGCTCTTCAGATTATTCTGTGAAGAAAATGAAACTAAGAACTGTTGACATAAAGGTTCTTTGGAGAACCCAAAATGGTTCTTCTATTGAATCGCTACTAAACCCCCCCCTTTCTTTTTAAGTGTACTTTTGTTTCAAAACTGCAGAAATTGGAACTAATAAATGATATGTTTCTTATAGACATTAGTACATTTTTACTGTACTTCAGTGACTTCATCTTTCAGGCACACAGCATGGTTCTCTTTTGAGGACGGAGAGAGGCCAGAGATACATGGCTCCTCCCTCAGTGTAAGTAAAAACATTCCAGCCAAGTGAGAGAGCCAGCGAATTTGAAACGCTGGAAGTCACTTCTTTTGGTCCCTTTTCCTTGTGAGCACTCACACGCTTACTAGAGGACAAGGCGCTCCATAAGCAGCTGCAGCACATCTTTTTTGAGTGTTCTTTTGTTTTGTGGAGTACGTGAAAGCGTCCCTTATCCAAAGCCAACATGAAAGCCTCCATATTTTTCATTCTCTTGACCGTTTTGGCTCATTCCAGAGGCCAGTACCACTACCAGGGCCTGATGAACTACCTGGAAAACAGGATGCTCGCTATGGAGGAACGCATTGCCTTGTGGCATGAACAGAACAACCGCTACAGCTCCGACCTGAAGGAATTCAGGCAGCAGGCCGCAGACCTGTTGGAGAAGTTGGCCAAGGAGCACAATAAACTGCATTCGGACATGGAGGGCGCAGGAGCACGGGTAGACCGTGTGGAGCGTGAGATGGACTATATTGAAACCAAGAATCCCCCTAAGCCTTGTGTGAAAGCAGCAGACAAAATGGTGGAACAGGACGTGGTTGTCAAAGAGAGGAAGAAGGAAGAGTTCTTTGAGCTGTCTGTGTGTGTGAATATTGTATCCACTCTAAAAGCAATGAAGATCCTTAAGAGGTTGGGGAGCCCGAAAGGTGTCTGGACCAAAGATGCCAGGTCAGCAAAAGTCTACGTCTTCAACGGCACATCCGACAACACGCTGTACGAATTCAACTCAGTGCGAGAGCTCTCGGCATCATCAGGCGTATCTAAAGGCAGGCAGATCACCGTTCCCTCTGCTTGGAACGGGACCGGTCATGCAGTCTATGATGGCTTTCTCTATTACATCAGTGAAAGTTCAGAGCTCCAAGTTATTAAATATGACCTCAAAAACGGTTCGGTTGCAGACAGTGCAGTGCTTCCCATGGAGGACCGCAGCCCAGTGTACCAACTCAATCCAGAGACACTGGTGGACTTGGTGGTGGATGAGGATGGGCTATGGGCGCTATATCCGGCTGGAGACACTATTAATCTTGCTAAGATGGACTCTAACTCTCTGGATATAGAACTAATGTGGGACACGGCGTGTCCAAGAAACAACGCTGAAGCTGCTTTTATTGTCTGTGGCACAGTCTATGTGGTTTACAACACCAAGCCGCCGAGCCGCTCGCGTGTGCAGTGTGTGTTCGATGTGAATGACATGGTGAGCAGTGGCGAGGCCCCTCTGATTTATTTCCCAAGGCGCTACGGGGCTCATTCCAGCCTCAAATACAATCCTGAGGAGCGGCAACTCTATGCATGGGATGATGGGTACCAGATTCTGTATAAACTAGCACTGAAGAAGAAGCTATGGGCAATAATGCCACCACCTGAGGAATAGTGGCCCTTTTTAGCTCTTAAAGGGCTTTATGTTCCTGGCTACAAAAAGTTTGTGTTTTTCCTAAGGGGATAGTTACTGAAAATGAAAATTCTGTCATTATTTATTCACCTTCATGTTGTCAAGTCTGTATGACTTTATTTCTTCCATTAAACTCAACAGGAAAAATGTTGACTCTTTTCCATTCAATTACAATGGATGAGGATTGATGTGTTCAGTCATCAAAAAGGACACAAAACCTTCTCTGAGTCTGAATGATTTGTTCATGACTGAACCTGTTCAGTCAGTTTAATTCACTGATTCAGTTGCAGCAGTTAATGGCTCACTGAATTGTTAATGTTAAACAACTTAAATTTGGGTCTAATTCTTACATAAATCTATCATGACTTTTTGTGAAACAAGCAAAAAATGTA

Function

symbol description
olfml3a Predicted to be located in extracellular region. Orthologous to human OLFML3 (olfactomedin like 3).

NR:

description
Olfactomedin-like 3, partial

GO:

id name namespace
GO:0005576 extracellular region cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_08841482_08845223.mRNA True 2215 mRNA 0.44 3 8840862 8845633

Neighbor

gene id symbol gene type direction distance location
CI01000001_08785318_08810381 FAM132A coding upstream 30481 8785318 ~ 8810381 (+)
CI01000001_08748236_08757869 NCKAP5L coding upstream 82859 8748236 ~ 8758003 (+)
CI01000001_08721737_08727450 KANSL2 coding upstream 113092 8721737 ~ 8727787 (+)
CI01000001_08714618_08721009 NA coding upstream 119680 8714618 ~ 8721182 (+)
CI01000001_08667814_08671039 NA coding upstream 169423 8667654 ~ 8671439 (+)
CI01000001_08934325_08940532 KLHL21 coding downstream 88374 8934007 ~ 8941354 (+)
CI01000001_08950041_08960737 NA coding downstream 104408 8950041 ~ 8961071 (+)
CI01000001_08962231_08968219 CASP9 coding downstream 116598 8962231 ~ 8968227 (+)
CI01000001_08971649_08984224 NA coding downstream 124912 8970545 ~ 8984239 (+)
CI01000001_09039724_09045754 NA coding downstream 194091 9039724 ~ 9046115 (+)
G17441 NA non-coding upstream 3226 8837123 ~ 8837636 (+)
G17439 NA non-coding upstream 17753 8822875 ~ 8823109 (+)
G17423 NA non-coding upstream 56675 8783905 ~ 8784187 (+)
G17422 NA non-coding upstream 66793 8773828 ~ 8774069 (+)
G17394 NA non-coding upstream 77324 8761469 ~ 8763538 (+)
G17373 NA non-coding downstream 1333 8846966 ~ 8855733 (+)
G17450 NA non-coding downstream 46232 8891865 ~ 8892113 (+)
G17469 NA non-coding downstream 66033 8911666 ~ 8912004 (+)
G17473 NA non-coding downstream 68958 8914591 ~ 8915126 (+)
G17474 NA non-coding downstream 69645 8915278 ~ 8915601 (+)
G17234 NA other upstream 808379 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 1300276 7531541 ~ 7540586 (+)
G15995 NA other upstream 3125911 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 3550906 5279837 ~ 5287698 (+)
G15794 NA other upstream 3776158 5061218 ~ 5064704 (+)
G17353 NA other downstream 370389 9216022 ~ 9228859 (+)
G17354 NA other downstream 388830 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 572695 9435836 ~ 9436373 (+)
G18896 NA other downstream 1394267 10239900 ~ 10241492 (+)
G18873 NA other downstream 1411479 10223879 ~ 10260714 (+)

Expression


Co-expression Network