G17441


Basic Information

Item Value
gene id G17441
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 8837123 ~ 8837636 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU19569
GATAGAAGTCTTTTAATAGGTCATTACATTTGTTTGTGCTGTTATATTGCATTTATTGTGCATTAGCCTCTTATAAGATGCTGGGACGTTCAGTTGAGCAACAAGATCGCAGCACATCTCAATTCTCAAATGATGCGTTCTGTGTCCTCGCGTCCTTCCGAGTTCGTTCTTTCAAGGTCGCCTGGCAAGACCGGACTCCACGAGAACGCAAGTCCGTTCTCTGCGTTCTTGGAATTGAGAAACAGCCTCAGTCTGTATGAACGTGCAACGAGAGTCGAGCCCTTATTCTCTTACTAGTAACCATAACGAAAGTGACCAACGTAATATTAAAGATGGCGACGTCCATAAAACTGAAAAGTCTCATCACTTTTGACATGACAAGAGACTAATTGAACCGCGAGTTCATCCATCAGAGCTTCATTAACCAACAGCAGCATGTAAACACATGCTAGCTGGAGTCCTTAACCGTTGCACTCGCATTTCACGTCCTTTGCGACGTCTCGCGCATGACACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19569 True 514 lncRNA 0.45 1 8837123 8837636

Neighbor

gene id symbol gene type direction distance location
CI01000001_08785318_08810381 FAM132A coding upstream 26742 8785318 ~ 8810381 (+)
CI01000001_08748236_08757869 NCKAP5L coding upstream 79120 8748236 ~ 8758003 (+)
CI01000001_08721737_08727450 KANSL2 coding upstream 109353 8721737 ~ 8727787 (+)
CI01000001_08714618_08721009 NA coding upstream 115941 8714618 ~ 8721182 (+)
CI01000001_08667814_08671039 NA coding upstream 165684 8667654 ~ 8671439 (+)
CI01000001_08841482_08845223 OLFML3A coding downstream 3226 8840862 ~ 8845633 (+)
CI01000001_08934325_08940532 KLHL21 coding downstream 96371 8934007 ~ 8941354 (+)
CI01000001_08950041_08960737 NA coding downstream 112405 8950041 ~ 8961071 (+)
CI01000001_08962231_08968219 CASP9 coding downstream 124595 8962231 ~ 8968227 (+)
CI01000001_08971649_08984224 NA coding downstream 132909 8970545 ~ 8984239 (+)
G17439 NA non-coding upstream 14014 8822875 ~ 8823109 (+)
G17423 NA non-coding upstream 52936 8783905 ~ 8784187 (+)
G17422 NA non-coding upstream 63054 8773828 ~ 8774069 (+)
G17394 NA non-coding upstream 73585 8761469 ~ 8763538 (+)
G17373 NA non-coding downstream 9330 8846966 ~ 8855733 (+)
G17450 NA non-coding downstream 54229 8891865 ~ 8892113 (+)
G17469 NA non-coding downstream 74030 8911666 ~ 8912004 (+)
G17473 NA non-coding downstream 76955 8914591 ~ 8915126 (+)
G17474 NA non-coding downstream 77642 8915278 ~ 8915601 (+)
G17234 NA other upstream 804640 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 1296537 7531541 ~ 7540586 (+)
G15995 NA other upstream 3122172 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 3547167 5279837 ~ 5287698 (+)
G15794 NA other upstream 3772419 5061218 ~ 5064704 (+)
G17353 NA other downstream 378386 9216022 ~ 9228859 (+)
G17354 NA other downstream 396827 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 580692 9435836 ~ 9436373 (+)
G18896 NA other downstream 1402264 10239900 ~ 10241492 (+)
G18873 NA other downstream 1419476 10223879 ~ 10260714 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location