CI01000001_08427984_08438912


Basic Information

Item Value
gene id CI01000001_08427984_08438912
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 8427984 ~ 8439430 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_08427984_08438912.mRNA
ATCTTGGCTGGTTGGGGGGAGTGACTGTGATGTCATTTGAGAGCTGGGTTGAGCCCCGTCAGCACAGAGAAGAGCCAGGTGCCGGACAGAGACAGGACACACAGCATGTCCGTGGAGTCACACAGCAGACGATGAGCGGTCAGGACCAATCAGATGAGGAGGAGAAGGGCAGTGCGCTGAATGCTGGGGTTGAGGTTGTGGTGCTACATGTGAATGGAGCTGAAATGCAGAAGGAGAAGAACAAGGACACAAGGGGGAGAAGACGGGCCGCTCAGAATATACACAGAGTAAAACATCCAGATGCAGCCCTGCCAGTGAGCGTCTCATTTGTTGAGAGGGACAGAGACAAGCGGCCTGAAGATCCACGAGGCCCTGGACCCTTCTTTTACTTTGGGGGAAACAATGGGGCCTCCATAGTTGTTTCATATTGTGAGGGTCGAGGCTGGCAGCGAATATATGACAAGACCAGGACGGACTACAAGCTCAAGTGGTGTGAAACTAAATCACCTGCTACCTACAACAGCTTCAAAGCAGGTGGCCAGTTGCTTTACCAGATACCCAATAATAATGTCCTGACCACTAAGATTGGCCTTCTGAACAGCCTACGGGAGTATGACAGAGTCAGCAGCAAGGTTAACTATGGATGTGGAAACAGGAGAATGAAGCTGGAGGACTTTTTTCCTGTCACTTTCCGTATGGATATGAAGGATGAGAGAGAGGCTTACTTTAAAGGCAAGACTACATGTTATATAGATACAGACAGAAACAGAATATGCAATGATAAATCCGGTATGTGGATCTGCAAGCCGACAGGCCTTAATCAGGGCCGTGGTATTTTTCTACTGCGGATGCCAGAAGACATCACAGCATTCAGAGAACGACTGCAGAACACAATAGAGAAGCAGTCCAACAGGAGGTCACCTTTCAATATGCCACAAGCTCTGATTGTTCAACAGTACATCCAGAACCCTTTGCTACTAAAAGGGCGAAAATTTGATGTGCGGTCATACTTTCTAATTGCTTGCACCTCGCCATACATGGTGTTTTTTCGCCATGGTTATGTCCGATTGACATGTAACCTTTATGACCCCAACTCTGACAATATCACAGCCCACTTGACCAATCAATACATGCAGAAGAAAAATCCTCTCTACAGCCTGCTAAAAGAGGAAACCGTTTGGTCTATGGAGCGCTTCAATACATACATTAATGAGACATACATGCTGTCAAAGGGTCTGCCCAAAGATTGGGCTCTGGGTCCTTTTGCAAAAAGGATGCAACATATCATCATGCAGTGCTTTCAAGCTGTCAAAGCCAAGCTGGACTGCAAACTTGGTTACTTTGACCTAATTGGCTGTGACTTCTTGATTGATGAGGATTTCAAGGTCTGGTTGCTAGAGATGAACTGTAACCCTGCCCTGCATACTAACTGTGAAGTGCTGAAAGATGTAATACCACGGACAGTCACTGAGACACTTGACCTTTCTTTGGAAATCTTCAATAAGTCTTGCTGTGGACTGAAACTCCTGCCACTAAACAGTCAAAGAGAGTTTTTGTTGTTGTATGGTGGTGAGACTGCGGCTATAACTAAAAAGAGACACAAAACCACCGGGCCCTTCTCGACCCTCCACCCAAAGAGCAGCTCCACCCACAATAACACAGACAAAACTGTTGCCATCGAAACACAAACAGGGAAATCAACTAATAGGGGCAGCAAGTGTTCTGAAACTCAAGCCAAATTTCCTTTCCCTTCCACCGCGATCCACTCTTCCTCTGTTTTGTCCAATACCAGCCCACCTTCACAGCAACCTGTGGAGTTACCAATGAAACATTCAGCAGTAGCAACTTTATCCCAGAAGCCTCTGACATCCAAAGCTCAAGAAACAAATCAGCCTCGACCATACCAGCCCAGACCTGTCCGTGCACGTGTGGAGTTGCAGCTCAGCAAGTGCACCTGGCAGCAACCTGCAGTGGTATCCAACCTCAAAGTGCCTCCACAACCGGTGAGAAGTGCTATCAGGTCATTGTCTACACCAGCCCTGAGCAAAGACTTAAACCCCACACAAAGACTTGGAGCTCAAGGCCGCCAAACAGACAAAATGATGCACGTGAGCGGCAACCTCAAGATGTCCTAGATTCATTTGGCTGAGCCGTACTTCCTCCACACTGTGGGGACAGAAAAGAAAGAGACCAAAGAATAGGAAGATGATGGGTGACTGCACTTTCAAATCAAAACAGTTATAAGGGCTTCTTCTCTGAATAATTAGCATTTTCTTCTGCTTGAGTCTAATGTTGTTCCTCATCACCAGAAGCATCATGCTCATTTAAACTGATGCTCCTGCTGATTTTGTTTTTTAATTTTATTTTTTACATGTCACCCATTTATTTATCATACATCATCTATCCTCCCTCATGCCGCTCAAAACTCTGTGGAAACCAAAGTGGGTTAAACTTATTAAAATGTCAAAGCTGCTCTTTTCCATACAATGAAAATGCATGGTAAATACAGACTAAAGTCTGTGTAACTGCTTTATTTATTATATATTCCTTGCCTTTCAAAAGTTTGGGGTTGGAAAAAAAAAAAAAAAAGTAAATATTTTTGGTAGAAGTCTTTTATGCTCCCCAAGGCTGCATTTATTTGATAAAATGATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_08427984_08438912.mRNA True 2653 mRNA 0.45 11 8427984 8439430

Neighbor

gene id symbol gene type direction distance location
CI01000001_08365139_08380569 PTPN11B coding upstream 47290 8364229 ~ 8380694 (+)
CI01000001_08271059_08344201 AGRN coding upstream 83783 8271059 ~ 8344201 (+)
CI01000001_08248565_08260072 AGRN coding upstream 167883 8248565 ~ 8260101 (+)
CI01000001_08208872_08234456 NA coding upstream 193404 8208083 ~ 8234580 (+)
CI01000001_08174175_08184832 NA coding upstream 242110 8173283 ~ 8185874 (+)
CI01000001_08444733_08450428 NA coding downstream 5303 8444733 ~ 8450924 (+)
CI01000001_08540376_08551579 CLCNK coding downstream 100473 8539903 ~ 8551725 (+)
CI01000001_08667814_08671039 NA coding downstream 228224 8667654 ~ 8671439 (+)
CI01000001_08714618_08721009 NA coding downstream 275188 8714618 ~ 8721182 (+)
CI01000001_08721737_08727450 KANSL2 coding downstream 282307 8721737 ~ 8727787 (+)
G17209 NA non-coding upstream 31072 8391063 ~ 8396912 (+)
G17215 NA non-coding upstream 145090 8279353 ~ 8282894 (+)
G17252 NA non-coding upstream 346242 8081512 ~ 8081742 (+)
G17216 NA non-coding upstream 389341 8038244 ~ 8038643 (+)
G17236 NA non-coding upstream 392800 8034979 ~ 8035184 (+)
G17292 NA non-coding downstream 54004 8493434 ~ 8493705 (+)
G17294 NA non-coding downstream 67337 8506767 ~ 8508481 (+)
G17188 NA non-coding downstream 75438 8514868 ~ 8515415 (+)
G17295 NA non-coding downstream 76827 8516257 ~ 8516801 (+)
G17194 NA non-coding downstream 91093 8530523 ~ 8533627 (+)
G17234 NA other upstream 395501 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 887398 7531541 ~ 7540586 (+)
G15995 NA other upstream 2713033 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 3138028 5279837 ~ 5287698 (+)
G15794 NA other upstream 3363280 5061218 ~ 5064704 (+)
G17353 NA other downstream 776592 9216022 ~ 9228859 (+)
G17354 NA other downstream 795033 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 978898 9435836 ~ 9436373 (+)
G18896 NA other downstream 1800470 10239900 ~ 10241492 (+)
G18873 NA other downstream 1817682 10223879 ~ 10260714 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location