CI01000001_08174175_08184832


Basic Information

Item Value
gene id CI01000001_08174175_08184832
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 8173283 ~ 8185874 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_08174175_08184832.mRNA
GTATATATATCGAGGAGAAATTGACTAGAGGGCTGCACGTTCTAGAACAGACGAATGAGATTTTCACACCCAATCACACTGAACCTCATTGAGGAGTGTCACTTTGTACATCGTGTTAACAAGGATTAGCGTGTGGCCGGTTCTTTGTCAATCTGAGGTATTTAGAATGGGTCAGTTCATCTACAGGTTAATTCATTTTTTTTTTTTTTTTTTGGAATAAGCCGGAACGAAGAGCCGAAGCTGATATGAAAGCGAGGAAAATGAAAATGGGGGTCAGCGCGCAGGATGTGATAGAAAAAAAGCTAAGACGGAGAAAGAAACTGACAAAAAGGAAACGAGAGGAGGTGGTAGTTTTTCTCTCACTGTCCATCATGGCCCACTAATGTATGAATGGTGCGATGAAAATTGATTTCCAAGTGAATTATTCCAGGCTCTCAGCCTTTTATAAGACAATAACCTTTACTAAAGTGCCACTGTCTTGAGTAAGATGAGTTCACTTGTTCATTTCACTACGCATTTTCTTTCTTTCCTCCTTTCTTCCTCTCGTATTTCACTCTCTGACGGAGTCACTAAATAGACCTTGCAATTATAGGCAGACTGTTTTGATCGATAGAGGTGGAAATGATACCGGAGTGATGGGAAAATTATGAAATATGAAGAGCGAGAGGAGCATTTGATTGTGGGATGGAGGAAAAGGGGGGCGACTATTTTCTCAGAGAATGAGTTGTTGCGGGCAGGTGGTAGACAGAGCGTCAGGTCAACTTATTGATCCGCGCATGTGGCCAGCAGACGGGTCAGAGACACACCACGGTGGGCTCCCAGTTGTCCGTCCTCTGGCTGGAATGCCGATGCTCCATCACTGTCAAACTCGGCTTGGTATTTTGACCTGGCAATGGTGAAGCGCTCCTCCATAATGTGCCAGTGTGTGTGTCCTTTTGTCTCTTCCTCATGTGGGCATGTTTGTGAGGATTTTGGCTCCGGCCCCTGGTTCTCCCTCACTTCCTTTAAGCCCAGCGGAGGATTGGTTTTGGCTGGGTCACTGCCTGGCTACAGATGCATTCTGGCTGGTGTCCACAGTCAGCAGTCTGTGGTCAGCGGTCATCGTGCACAATGGAGACGGGACGTCCCCTCTCACTGGTACGGATGCCCCTGTACGGGGGGCCTCCTCTCAGCTATGAGCCAAAATGTTGTGTGGATCTTTTTGAAGAGTGTCACATGGCAACGGCCCTCCGGAACACTGGGACATGGAGCCAATTTGTTGCCTGGTGAGATATATGAAAGAATAGTGTTGATTCAGGGTCCGGATAGAATCTTGGAGGAAATTCTTCGTCCACGGTTGTTATTGCGGTCCCTCTTTGTTGGTTTGCAGCTCTCAGCCCGGGGCAGCTGCGCTCAACAGCTTGGTCCCGGAGTGAGGAGCAGTCTGAGTGGGAGGGTAATGAGCTTGCTCCACCCAGAGTTGAAGATCCAGCTGTGGGAGAAGAATCGTCCTCGCTTGCATATCTTTGCTTAGGCAGGTGGTTTTATGGTGGGGAGGGAATCGGTTTGGGAATATGGTAATACGTGTGATGGTAGAACTCTCTTTAATATCTCATTTGTTCTCCTCGACAGTAGTGAGATTAAATGGAGTGCAAATTGGCTTGAGGCTGTTTCTCAGATTTGATGTCTCTGAACATAGTCATCTCAGATTTGTCTTTTCTAAAGTTTTGAGAGAGATCATAACAATGTCTCATACTGTGCTCAGATTTGCTTGGATATTTCACTTTGAACTCGTCATTTCTCATCAAATCCTTCCAAATCTATCAATGAACATGTATACATTTATTTTGTGATCTGCTAAAGATTACATTTTACAGTGTTATTCAATTATTATTTTTTAAAGGTTAAATTATGTTAAATGACTGCAAAGTTATTCTAAATCTAAAAATTAGGGAAATGCACATACAATATTAGCTGATACCAATAAATAAATAAAATCTCTAATATATGTCAATTACAGATATGGTATTGATCTATTGTGAATCGCTAAACGACGTAACAAAAGATGCTAATTAACTTTCCTGAGCAATGAAAGAGCAACGTCAGACTAATAAAATCTTCCTCTGGAATGATTTATTTGCTCCTTCCTTGATATATGGGAGAAGGTTGGATTTATGTGATGGTGGTTTTCATCAGTCCTAAAGCACTTAACCTGAGTGGCGGTGGGTATCCTCAACCAAAATCAATATGTGATGTACGGTATATGGCCATGTGCTGAGCACACATCGACTAATAGGTATTAGGGCGAGGACTGGGTAAGGAAAGAAGGATTAGGGTAATTGTGTTTTATCTGCCATGGTCTTTAGTGGATTGTACCAAGGACACACACACACACACACAATAGATAGAGAGATAGAGAGACCTCTCTAGTGACCTCTACAATGTAGATAGCAGTGAACTAGAGTGGAACAGGCTCTCACACTGTGCAAGCAGATAAAGATCAGATTTGAAAATCGCATTTATGGAGCAGAACTCCTTTTGAATTATTCAAATAAGAAGAATGGTCCTAAAACATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_08174175_08184832.mRNA True 2555 mRNA 0.43 6 8173283 8185874

Neighbor

gene id symbol gene type direction distance location
CI01000001_08113500_08119591 NA coding upstream 53576 8113164 ~ 8119707 (+)
CI01000001_08091363_08093148 AGRN coding upstream 80021 8089922 ~ 8093262 (+)
CI01000001_07935720_07951221 PLEKHN1 coding upstream 221374 7935720 ~ 7951909 (+)
CI01000001_07908382_07926320 KLHL17 coding upstream 246806 7908382 ~ 7926477 (+)
CI01000001_07811962_07871073 SAMD11 coding upstream 302210 7811962 ~ 7871073 (+)
CI01000001_08208872_08234456 NA coding downstream 22209 8208083 ~ 8234580 (+)
CI01000001_08248565_08260072 AGRN coding downstream 62691 8248565 ~ 8260101 (+)
CI01000001_08271059_08344201 AGRN coding downstream 85185 8271059 ~ 8344201 (+)
CI01000001_08365139_08380569 PTPN11B coding downstream 178355 8364229 ~ 8380694 (+)
CI01000001_08427984_08438912 NA coding downstream 242110 8427984 ~ 8439430 (+)
G17252 NA non-coding upstream 91541 8081512 ~ 8081742 (+)
G17216 NA non-coding upstream 134640 8038244 ~ 8038643 (+)
G17236 NA non-coding upstream 138099 8034979 ~ 8035184 (+)
G17233 NA non-coding upstream 142733 8028234 ~ 8030550 (+)
G17177 NA non-coding upstream 209381 7962777 ~ 7963902 (+)
G17215 NA non-coding downstream 93479 8279353 ~ 8282894 (+)
G17209 NA non-coding downstream 205189 8391063 ~ 8396912 (+)
G17292 NA non-coding downstream 307560 8493434 ~ 8493705 (+)
G17294 NA non-coding downstream 320893 8506767 ~ 8508481 (+)
G17188 NA non-coding downstream 328994 8514868 ~ 8515415 (+)
G17234 NA other upstream 140800 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 632697 7531541 ~ 7540586 (+)
G15995 NA other upstream 2458332 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 2883327 5279837 ~ 5287698 (+)
G15794 NA other upstream 3108579 5061218 ~ 5064704 (+)
G17353 NA other downstream 1030148 9216022 ~ 9228859 (+)
G17354 NA other downstream 1048589 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 1232454 9435836 ~ 9436373 (+)
G18896 NA other downstream 2054026 10239900 ~ 10241492 (+)
G18873 NA other downstream 2071238 10223879 ~ 10260714 (+)

Expression


Co-expression Network