CI01000001_08113500_08119591


Basic Information

Item Value
gene id CI01000001_08113500_08119591
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 8113164 ~ 8119707 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_08113500_08119591.mRNA
CTATTTAAAGCCTACATCTATACCCTGTCAGAGTTTGACAGATGGGCCTGAAACCGCTCAGCCTTTTTACTGTCCGATCCTCCCCGGTGAAAAGCTTGCTTTCAGACAGGCAGCTCAAAGGCTGCCATAACAGTGACTCGGAGATGAGTGCCCTTATCGGTTTGCAGTAATCTGATTACTCTGACATCTGTGGGACAAAAGAAACACTACTCCTGCAAAATGGTGCTTGCGGAACCCTGGCAGAACCCCAGAGAAAGGGATAATAAAATTTCTTTAGGTGGGCATCAATGTGAATAGATTGTGCCCTGACTCACACGCCTACACGTTACCGGAGGCATGTGGACAGAAAGCTTTGTCACAGATTCCAATAAACTGGACGTTCGCAATTGGGATGTGTCGCGATTTATTGTACACATGCAGATTGTTATGAAATATGGGGTGAGCAGCCAAATTAAAGCACTTGATACAGTGTCACGAGTTCAAACAAAGATTGCAGAAAGGAGTCGTGCAGGGACTACATTAATTGCTACCTGCATCACAAAAGGCTTTGCAAAATGCGATGGTGTGGACACAGGTGTTTCAAGAGAATATAGAGGGAAGATAGACAGGGAAAAGGGGAGTTTTTTTAATGGAATATGTCCAAACTCGGTTTTTGAGTTGGTGTCCTTATGTAGTCTTATTCCTTTGTGTCTGTTCCAACTGACGGGTCATATACAAAGGCAAACTCTTGCCCCACAGTTCAGTGAATGGGTTGTTAGCTCTTATCCACAACCGATCCGGGATGCTGAGCTTTCGTGGAGCTGGTCTGAGGGAGACCTTGGCTCACCCCTTGCGGTCAAAGAAAGGAAAAGAAAGCCGGCCATTTCTACATCTGGTGTCAATCATCAGATCCAGCCGGAGCTGGGAGAAGGCCAAGTTCAGTGTGCAACAGGCTGGTGGTTAACTGGAAGTAATGAAAAGCAGACATCTCCAACATATGGTCTGAATTGATAAGGCATGTCAGGAGATTTTGCATTTCCAATGAATGACAAAAAGCCTGGTGCACCTGTCACGTCATTAGCTTTTTCTTAAGAAGATTCAATTATAACCTTATGTGGGCCGTAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_08113500_08119591.mRNA True 1106 mRNA 0.45 3 8113164 8119707

Neighbor

gene id symbol gene type direction distance location
CI01000001_08091363_08093148 AGRN coding upstream 19902 8089922 ~ 8093262 (+)
CI01000001_07935720_07951221 PLEKHN1 coding upstream 161255 7935720 ~ 7951909 (+)
CI01000001_07908382_07926320 KLHL17 coding upstream 186687 7908382 ~ 7926477 (+)
CI01000001_07811962_07871073 SAMD11 coding upstream 242091 7811962 ~ 7871073 (+)
CI01000001_07678904_07760870 RERE, REREA coding upstream 352294 7678904 ~ 7760870 (+)
CI01000001_08174175_08184832 NA coding downstream 53576 8173283 ~ 8185874 (+)
CI01000001_08208872_08234456 NA coding downstream 88376 8208083 ~ 8234580 (+)
CI01000001_08248565_08260072 AGRN coding downstream 128858 8248565 ~ 8260101 (+)
CI01000001_08271059_08344201 AGRN coding downstream 151352 8271059 ~ 8344201 (+)
CI01000001_08365139_08380569 PTPN11B coding downstream 244522 8364229 ~ 8380694 (+)
G17252 NA non-coding upstream 31422 8081512 ~ 8081742 (+)
G17216 NA non-coding upstream 74521 8038244 ~ 8038643 (+)
G17236 NA non-coding upstream 77980 8034979 ~ 8035184 (+)
G17233 NA non-coding upstream 82614 8028234 ~ 8030550 (+)
G17177 NA non-coding upstream 149262 7962777 ~ 7963902 (+)
G17215 NA non-coding downstream 159646 8279353 ~ 8282894 (+)
G17209 NA non-coding downstream 271356 8391063 ~ 8396912 (+)
G17292 NA non-coding downstream 373727 8493434 ~ 8493705 (+)
G17294 NA non-coding downstream 387060 8506767 ~ 8508481 (+)
G17188 NA non-coding downstream 395161 8514868 ~ 8515415 (+)
G17234 NA other upstream 80681 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 572578 7531541 ~ 7540586 (+)
G15995 NA other upstream 2398213 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 2823208 5279837 ~ 5287698 (+)
G15794 NA other upstream 3048460 5061218 ~ 5064704 (+)
G17353 NA other downstream 1096315 9216022 ~ 9228859 (+)
G17354 NA other downstream 1114756 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 1298621 9435836 ~ 9436373 (+)
G18896 NA other downstream 2120193 10239900 ~ 10241492 (+)
G18873 NA other downstream 2137405 10223879 ~ 10260714 (+)

Expression


Co-expression Network