G17215


Basic Information

Item Value
gene id G17215
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 8279353 ~ 8282894 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU19329
CAGCCAGGAGTCAATTATTCTGCTTATACTACGGTTAACACACTCAAGACACTGTTCCGATGTTGTATTCCGATGTAAGACATTTGTCAGGTTTTTGTCTTTAAAACACTCTTATGTCTGGGTCTAATTTCTTACACATCTCATCCCAAGCCTCTGTTGCTAATTCCAAAGCATCATTTCAGAACTAGTAACGAAGACTTGAGCCTTGATAGCAGACTAATCCAGTTGATACAGTTATTAACGCAGTTGAGAGAGAAAGAGAGAGAGAGAGAGAGAATAAGCATATGAATTAGCCTACCTGAGTCTGTGCGTCTCTAACGGCAGCAGTGTCTCTACTAATAGCGAAACTATTTTTTTATCTAGTTTATCTACTTCAAGAACCGCACAGTTATTAATTGACTGGTGAGAAATGTCATGTAGCTTTTAAGCTGCTATTTTACTGATTAATTCGTTGGAGTAGCGCTGACAAAACGTTTCTGTGCGAGTGTGTGTCTGTACTATACAGTAGGTGTGTACGTTTAAAAGAGAGAGAGAGAGGGAGAGATTATGCGCTTTCAGGACACAATAAAACATATTTTGTGGCAAAAACCATGACAATAATTTGTCGTTTTCATCCTATTGTTTACTATATTTATTTGCTTGGTCGGTGTCGTTGTGAGGTTTGGTTCTTTTGCGGTTGTAGGCTGTAGGACCTATTGAATAACTGAAATCATTTGGTGAAGTGATATGGAACTGCAATGCGGTCAAGACCTGCTAGAACTACTTTAACCGTGCGTTTCCCTGAAAACAATTGCACACCTTAGAACATTGGTCAACCAATCAGATTTGAGCATTCAACAGCCCCGTAGTATATAATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATTCACTTTCTATTTATAAAAGAATCCTGAAAAACACATCAGCATATTAGAATGATTTCTGAGAGATCATGTGACACTTTATACAGGTTATTTATTTTATTTTAGTTTAGTTTTATTTAAATACTATAATATACCCCAACACTTCACTGTATAGTTGTGATGTACTGCAATATCTCACTTATGTCATTCCCAGCAGGCTTTTCGGCAGTAAAAAACACATGCTGTTTTCCCCTCTAAGTCTATTCAGACCTTTCTTTCCAGCTCTGTAAGCTGTGGAGGAGTTGCTGTTAAAGGTTGCAGGGATCTGGGTCTGGTCAGTAGATCCTAACCAGAAGCCAGTGACACCTGCTTTGTCAGTTTATTCTCTACAGTAGTGATGCCTGGCAGGTCTTTGTATGTAGAAGATCAGTGAACAGTGTATTAGCTTGATGAAAACAGAGCTGATTTGTCTATCTTACATTTAGCTTTCAAATACCTTGCTTTATTTGTGTGATGGTTGGTATGATTTTGTGTTTATGGGCATAAAATATAGTGTCAAAGTAAAACATTTTCTTAAAGGGGCCAAAGGGGCTGTTTATTTACACAGAGAGGCTTTATTCATTTGTTTAGACCTGGCTTCCATACTCATGTTCATTAGTCATAAGAAAAAAATGGCAGTGTTCTTTCACTCTTTCATTTGGAGGTAATGAAAAATGACAGTGTTCCCTGCATCTGGCCGTAGCAGTGAATTTATCACCTGTTTAATTTCACACTCTGCTAGTCTGAAGTCAGCCTCATTGTAGACACAGACAAAGCGATATGAGGGAGCCGAGCATCACCTTGGGGCCGCGGCCCGCTTTTAATTGAATATACGTTTACTAAATAGGATTATGCATTGGAAATAGCAACATAATAGCGTATAAAGCATCGGTTTAGGCTCTGGATCACCCACAGGAAGAGAGTTTGGGAGAGGGCAAACAGGAGAGAGTGTGCAGTCATCCATTACACACAAGTATCTTCTCATAAAAAACTTCTGCAGGCTGTCAGAATGCCCTATTGCTCTTTATGTTGGCAGCATTACAGTTACTCTAAGGTACTGTCCAGTTCTTTCAGTAATGCCCATCTACAGGGAGACAAATCACAGGTAAACAGAAAACAACCATCTAGTGCTGGGACTTATAGCTTAAAGGGCTGGTTGATTATGATTTCACTTTTTTAACTTCAGTTAGTGTGTAATGTTGCTGTTAGAGCATAAAGAATGTCTGCAAAGTTACAATGCTCAAAGTTAAATGGAAATGGAGATATTTTCTTTTAAAGAATTCTCTGTTTAAGGACTACAATAAATAGTGACATCACTAACCCTAAAATTTACATAACCTTGCCCCCAGGAACACACAACAAAGGGTGTGAGGCCATGTTGGGCTGCTTTAGAGAAGAGGAAGAGTTGTTGTAGTAGAGTGTTGTTATCATGCTGTCATTTTACACCAGACTGCTTCACAAATGAGGGTCAATTCAACGCTGGATTTGCACAAAAGATTAAAATGACGGCACATGCTAGTCAATGAGTTGAATCGACTCCACAGCAACTACATAAATGTAACTATTAACCATTCAGAAATGTCCAGATGCATTCTATAAGTTGTAACTTCTTCCTGAGTCTCTCCATCAGTGTCCGACTCCGGTTTGAACAATGTAAGGCTGAACACCGTTACTGACAATCGTCATTTTGGCAGCGTGAGATTCTCCAGCTTTGTTGTTGTTGAGCAACCGAAGCACGAGCTGTTAAAGCTCCGCCCTCTTCTGGAAAGGGGGCCGGGAGCAGCAGCTCATTTGCATTTAAAGGGACACACACAAAAACGGCATGTTTTTGCTCACACCCAAATAGGGGCACATTTGACAAGCTATAATAAATTATTTGTGGGGTATTTTGAGCTGAAACTTTACAGACACATTCTGGGGACACCAGAGACTTATATTACATCTTGTAAAAGGGGCATTATAGGTCCCCTTTAAAAATGATAACTTTTTTTAGTCTTTATCAATATGAATATAGATAAAGTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTACTTTTATTTAATGTTTTGTTTCAAACAACTGAATTTATTCTACAATACAATAAATATCTAGTAAATATATCTATGTATTAATAAAATATTATAAATATCCAAATTAAATTATCCAGGCATCTTTTCACAGTTTTTTTTTTTTTTTTTTTCACAGAATTAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19329 True 3136 lncRNA 0.37 2 8279353 8282894

Neighbor

gene id symbol gene type direction distance location
CI01000001_08248565_08260072 AGRN coding upstream 19252 8248565 ~ 8260101 (+)
CI01000001_08208872_08234456 NA coding upstream 44773 8208083 ~ 8234580 (+)
CI01000001_08174175_08184832 NA coding upstream 93479 8173283 ~ 8185874 (+)
CI01000001_08113500_08119591 NA coding upstream 159646 8113164 ~ 8119707 (+)
CI01000001_08091363_08093148 AGRN coding upstream 186091 8089922 ~ 8093262 (+)
CI01000001_08365139_08380569 PTPN11B coding downstream 81335 8364229 ~ 8380694 (+)
CI01000001_08427984_08438912 NA coding downstream 145090 8427984 ~ 8439430 (+)
CI01000001_08444733_08450428 NA coding downstream 161839 8444733 ~ 8450924 (+)
CI01000001_08540376_08551579 CLCNK coding downstream 257009 8539903 ~ 8551725 (+)
CI01000001_08667814_08671039 NA coding downstream 384760 8667654 ~ 8671439 (+)
G17252 NA non-coding upstream 197611 8081512 ~ 8081742 (+)
G17216 NA non-coding upstream 240710 8038244 ~ 8038643 (+)
G17236 NA non-coding upstream 244169 8034979 ~ 8035184 (+)
G17233 NA non-coding upstream 248803 8028234 ~ 8030550 (+)
G17177 NA non-coding upstream 315451 7962777 ~ 7963902 (+)
G17209 NA non-coding downstream 108169 8391063 ~ 8396912 (+)
G17292 NA non-coding downstream 210540 8493434 ~ 8493705 (+)
G17294 NA non-coding downstream 223873 8506767 ~ 8508481 (+)
G17188 NA non-coding downstream 231974 8514868 ~ 8515415 (+)
G17295 NA non-coding downstream 233363 8516257 ~ 8516801 (+)
G17234 NA other upstream 246870 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 738767 7531541 ~ 7540586 (+)
G15995 NA other upstream 2564402 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 2989397 5279837 ~ 5287698 (+)
G15794 NA other upstream 3214649 5061218 ~ 5064704 (+)
G17353 NA other downstream 933128 9216022 ~ 9228859 (+)
G17354 NA other downstream 951569 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 1135434 9435836 ~ 9436373 (+)
G18896 NA other downstream 1957006 10239900 ~ 10241492 (+)
G18873 NA other downstream 1974218 10223879 ~ 10260714 (+)

Expression


Co-expression Network