G17295


Basic Information

Item Value
gene id G17295
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 8516257 ~ 8516801 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU19417
GTTTAACCATGCAAAGCCACATGTGCTGTTCATCATGTTTATGTTTTTGTCTGCTTGACAGGACCATACAAATGTGTGGATCTTGTATTAGAGCAGTTAAAATTTGGTGCTTTGAGTACAATTCTCTCATACTGATCACTGGATGTTCAACATGGCACCTCATGGCAAAGAACTCTCTGAGGATTTGAGAATTAGAATTGTTGCTCTCCACAAAGATGGCCTAGGCTATAAGAAGATTAGTAACACCATGAAACTGAGTTACAGCACTGTGGCCAGAGTCATAGAGAGAGGTTTTCCAAGACGGGTTCCACTCGGAACAGGCCAAAGAAGTTGAATCAAAGAAGTTGAGACCTTGTGCTGTGCGTCAGGTGCAGAAGCTGGCTTCAAAAAACAGATGCATGAGTGCTGCCAGCATTGCTTTAGAGGTTGCAGAAGCAGAAGGTCAGTTTGTCAGCGCTCAGATCATACGCCGCACACTGCAACAAGTCGGTTTGCATGGCCGTCGTCCCAGAAGGAAGCCTGTTCTGAAGCTGGCTCACAAGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19417 True 545 lncRNA 0.36 1 8516257 8516801

Neighbor

gene id symbol gene type direction distance location
CI01000001_08444733_08450428 NA coding upstream 65333 8444733 ~ 8450924 (+)
CI01000001_08427984_08438912 NA coding upstream 76827 8427984 ~ 8439430 (+)
CI01000001_08365139_08380569 PTPN11B coding upstream 135563 8364229 ~ 8380694 (+)
CI01000001_08271059_08344201 AGRN coding upstream 172056 8271059 ~ 8344201 (+)
CI01000001_08248565_08260072 AGRN coding upstream 256156 8248565 ~ 8260101 (+)
CI01000001_08540376_08551579 CLCNK coding downstream 23102 8539903 ~ 8551725 (+)
CI01000001_08667814_08671039 NA coding downstream 150853 8667654 ~ 8671439 (+)
CI01000001_08714618_08721009 NA coding downstream 197817 8714618 ~ 8721182 (+)
CI01000001_08721737_08727450 KANSL2 coding downstream 204936 8721737 ~ 8727787 (+)
CI01000001_08748236_08757869 NCKAP5L coding downstream 231435 8748236 ~ 8758003 (+)
G17188 NA non-coding upstream 842 8514868 ~ 8515415 (+)
G17294 NA non-coding upstream 7776 8506767 ~ 8508481 (+)
G17292 NA non-coding upstream 22552 8493434 ~ 8493705 (+)
G17209 NA non-coding upstream 119345 8391063 ~ 8396912 (+)
G17215 NA non-coding upstream 233363 8279353 ~ 8282894 (+)
G17194 NA non-coding downstream 13722 8530523 ~ 8533627 (+)
G17310 NA non-coding downstream 51330 8568131 ~ 8568362 (+)
G17311 NA non-coding downstream 51602 8568403 ~ 8568689 (+)
G17316 NA non-coding downstream 60668 8577469 ~ 8577809 (+)
G17317 NA non-coding downstream 61214 8578015 ~ 8578232 (+)
G17234 NA other upstream 483774 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 975671 7531541 ~ 7540586 (+)
G15995 NA other upstream 2801306 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 3226301 5279837 ~ 5287698 (+)
G15794 NA other upstream 3451553 5061218 ~ 5064704 (+)
G17353 NA other downstream 699221 9216022 ~ 9228859 (+)
G17354 NA other downstream 717662 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 901527 9435836 ~ 9436373 (+)
G18896 NA other downstream 1723099 10239900 ~ 10241492 (+)
G18873 NA other downstream 1740311 10223879 ~ 10260714 (+)

Expression


Co-expression Network