G17311


Basic Information

Item Value
gene id G17311
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 8568403 ~ 8568689 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU19436
TTATGAGTGTGGATCAACACTGGCAAACAGCCTACATTTTAATCAGTTGCCAACTCTAGTTTGAACATGTTGCTATATATCTGGGTAAATATAAGAAATATTTGTTTTAATGACATGTGAATCATTGGTGTTTAACGACAAACTTTGAGGAATTTAGATAACTCAAATACATAAAGGCCTAGTTTAACTATTTTAGCCTATGCACATTTTTACTGATTTTATTTAACAAATCAAGCTCAAGTGCGTTTTGGTTTCATTTTTGTATATTGGTTCAGTTTGTTCAGTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19436 True 287 lncRNA 0.31 1 8568403 8568689

Neighbor

gene id symbol gene type direction distance location
CI01000001_08540376_08551579 CLCNK coding upstream 16678 8539903 ~ 8551725 (+)
CI01000001_08444733_08450428 NA coding upstream 117479 8444733 ~ 8450924 (+)
CI01000001_08427984_08438912 NA coding upstream 128973 8427984 ~ 8439430 (+)
CI01000001_08365139_08380569 PTPN11B coding upstream 187709 8364229 ~ 8380694 (+)
CI01000001_08271059_08344201 AGRN coding upstream 224202 8271059 ~ 8344201 (+)
CI01000001_08667814_08671039 NA coding downstream 98965 8667654 ~ 8671439 (+)
CI01000001_08714618_08721009 NA coding downstream 145929 8714618 ~ 8721182 (+)
CI01000001_08721737_08727450 KANSL2 coding downstream 153048 8721737 ~ 8727787 (+)
CI01000001_08748236_08757869 NCKAP5L coding downstream 179547 8748236 ~ 8758003 (+)
CI01000001_08785318_08810381 FAM132A coding downstream 216629 8785318 ~ 8810381 (+)
G17310 NA non-coding upstream 41 8568131 ~ 8568362 (+)
G17194 NA non-coding upstream 34776 8530523 ~ 8533627 (+)
G17295 NA non-coding upstream 51602 8516257 ~ 8516801 (+)
G17188 NA non-coding upstream 52988 8514868 ~ 8515415 (+)
G17294 NA non-coding upstream 59922 8506767 ~ 8508481 (+)
G17316 NA non-coding downstream 8780 8577469 ~ 8577809 (+)
G17317 NA non-coding downstream 9326 8578015 ~ 8578232 (+)
G17402 NA non-coding downstream 47892 8616581 ~ 8616784 (+)
G17403 NA non-coding downstream 51204 8619893 ~ 8620189 (+)
G17405 NA non-coding downstream 52822 8621511 ~ 8621840 (+)
G17234 NA other upstream 535920 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 1027817 7531541 ~ 7540586 (+)
G15995 NA other upstream 2853452 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 3278447 5279837 ~ 5287698 (+)
G15794 NA other upstream 3503699 5061218 ~ 5064704 (+)
G17353 NA other downstream 647333 9216022 ~ 9228859 (+)
G17354 NA other downstream 665774 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 849639 9435836 ~ 9436373 (+)
G18896 NA other downstream 1671211 10239900 ~ 10241492 (+)
G18873 NA other downstream 1688423 10223879 ~ 10260714 (+)

Expression


Co-expression Network