G17310


Basic Information

Item Value
gene id G17310
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 8568131 ~ 8568362 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU19435
CTTCCTCAAGGGCACAACAGTTCAGAGGAAGAGCTGAGAATTATCCGAACATGGATCCTCAAAGAATTATAGTCCCACCTCCATGACAAATTGATTATAAATGATTTCTTAATTTATCTGTAAATATTGAACGGCAGTAATCTGTGATTTACCACTAATGTAGATAACTATTATCCTCCAAATTTAAAGCATTTGAGTCATATTATTTTTCTATTTTTACATTTACTTTTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19435 True 232 lncRNA 0.32 1 8568131 8568362

Neighbor

gene id symbol gene type direction distance location
CI01000001_08540376_08551579 CLCNK coding upstream 16406 8539903 ~ 8551725 (+)
CI01000001_08444733_08450428 NA coding upstream 117207 8444733 ~ 8450924 (+)
CI01000001_08427984_08438912 NA coding upstream 128701 8427984 ~ 8439430 (+)
CI01000001_08365139_08380569 PTPN11B coding upstream 187437 8364229 ~ 8380694 (+)
CI01000001_08271059_08344201 AGRN coding upstream 223930 8271059 ~ 8344201 (+)
CI01000001_08667814_08671039 NA coding downstream 99292 8667654 ~ 8671439 (+)
CI01000001_08714618_08721009 NA coding downstream 146256 8714618 ~ 8721182 (+)
CI01000001_08721737_08727450 KANSL2 coding downstream 153375 8721737 ~ 8727787 (+)
CI01000001_08748236_08757869 NCKAP5L coding downstream 179874 8748236 ~ 8758003 (+)
CI01000001_08785318_08810381 FAM132A coding downstream 216956 8785318 ~ 8810381 (+)
G17194 NA non-coding upstream 34504 8530523 ~ 8533627 (+)
G17295 NA non-coding upstream 51330 8516257 ~ 8516801 (+)
G17188 NA non-coding upstream 52716 8514868 ~ 8515415 (+)
G17294 NA non-coding upstream 59650 8506767 ~ 8508481 (+)
G17292 NA non-coding upstream 74426 8493434 ~ 8493705 (+)
G17311 NA non-coding downstream 41 8568403 ~ 8568689 (+)
G17316 NA non-coding downstream 9107 8577469 ~ 8577809 (+)
G17317 NA non-coding downstream 9653 8578015 ~ 8578232 (+)
G17402 NA non-coding downstream 48219 8616581 ~ 8616784 (+)
G17403 NA non-coding downstream 51531 8619893 ~ 8620189 (+)
G17234 NA other upstream 535648 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 1027545 7531541 ~ 7540586 (+)
G15995 NA other upstream 2853180 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 3278175 5279837 ~ 5287698 (+)
G15794 NA other upstream 3503427 5061218 ~ 5064704 (+)
G17353 NA other downstream 647660 9216022 ~ 9228859 (+)
G17354 NA other downstream 666101 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 849966 9435836 ~ 9436373 (+)
G18896 NA other downstream 1671538 10239900 ~ 10241492 (+)
G18873 NA other downstream 1688750 10223879 ~ 10260714 (+)

Expression


Co-expression Network