G147430


Basic Information

Item Value
gene id G147430
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 17393836 ~ 17395176 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU217803
ttaatatcgcggtgttcaataaaaaatactatttaagaaaaataacgtaataatataatatttttagctGTATCGTTCCTCAAATGTTAAAGGCTTCATATTCAGATTAAAGCTATgctgtgattttattattattattattatttgttattatccAGCCCtaatctgcatttaataagcACTTTCTTTGCTTAACTACATTAAAAACCTCGGAGATCGATGCTCAAGCGTTTGCGGTATCTGTGCTCTCGCGGGCCCCGGGGCCGGGGTCAGGGCCGTGAGGTGAGTGGGTTAGTGACAGACGTACACACCTGCAGGGCCCGCACCAGTCCGTTTGTTGGTTGAGGCCGAAGCGAGCGCGGCATTTCTTTGGCGAGCCGGGGTCTGAGCGAAAGGCAGCATGCGtgcagaagaagagagaggaggaggaggaggaggaggagaggaagagaggtcCGAACAccaggagaaagagagagagaagcaatCACAGTCAAGACAATCAGCGCTCCCTCACAAACCAGGCCCACCGTCCTTCAGAGAGAAGAGGTCAGAAGCGCAGGGGTGGACTCGGAGGGACGAAAAGCGGGAAAAACGGCACAACTGCGAGACGGGAGACGAATTTTgaggagagggaaaaaaaatcggTGAAATGAACTTCAAGTCAAAAAGTCAAATCGTGCGTTTAGGGTTTTTTTGAGGGGAGACACAAACTCAGGAGGGAAAAAGACCTTTCTTATacttctaaaaatctaaattgtgaaATGCAAACACGACTAAGAACGTATTTCTATTCGACGAGTTGGTATTGAGATCTGAGTGATTCGCTCTAGAGCTGCGTGCATCTCCTAAAGCTCTCCCGTTTAAGCTTCTCTTCTTGCAAGTTCATTTCAGCTGGTTTTAGTGAGCGACGGCGCGTTAGAAATGTGTAGAATCGGTTTAGTTTACATACATGTCAATCAGAAGTCGACAGCCCGATAAACACAGTCTGAATGAAGGGCTTCGGCTGCAGTTTGATGAGAACAGAGCAGAGTTTAGTGAGTAGCTGTTCCTCGGAGAGCTAGAGCGCTAGTGCTGCTGGGGATCGCTCGGGGGCCGCTTTCTGGACACGACTCACTCTTAATGCATGAGAAAACACAAAACTCTACCTGTGCCAGGGTCCTGCTGCTTGTCCCGTTTCCTCCGCTTCTTTTTGCCCTGTGGAGATGaagatcagagagagagagaggtcaacacacacacagatacacacacacacacacacacacacacacacagacacacacacatacagacacaaacata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU217803 True 1305 lncRNA 0.47 2 17393836 17395176

Neighbor

gene id symbol gene type direction distance location
vdac1 vdac1,LOC107557296,LOC107692970,LOC107728276 coding downstream 62692 17321620 ~ 17331144 (-)
c21h5orf15 si:ch73-269m14.2,cunh5orf15,kct2,clg07h5orf15,LOC106603818 coding downstream 73480 17315412 ~ 17320356 (-)
zcchc10 zcchc10,LOC107562177,LOC107692962,LOC107603240,LOC107661792 coding downstream 456935 16933212 ~ 16936901 (-)
aff4 aff4,LOC107715968,LOC107692940 coding downstream 460758 16900947 ~ 16933078 (-)
shroom1 LOC107661693,LOC107742431,LOC107581967,LOC107715952 coding downstream 494148 16873986 ~ 16899688 (-)
skp1 skp1,Skp1,LOC105912995 coding upstream 4680 17399856 ~ 17404439 (-)
ppp2cab ppp2ca,LOC107603261,LOC107692973,LOC107728270,LOC107564119,LOC105021738 coding upstream 10183 17405359 ~ 17412380 (-)
cdkn2aipnl NA coding upstream 22644 17417820 ~ 17420442 (-)
LOC122326313 LOC107728266 coding upstream 68104 17463280 ~ 17480039 (-)
oatx oatx,LOC107562907,LOC107742468,LOC107661788,LOC107692946,LOC107728280,LOC108440612 coding upstream 85233 17480409 ~ 17488904 (-)
G147418 NA non-coding downstream 1611 17391057 ~ 17392225 (-)
G147427 NA non-coding downstream 6897 17382744 ~ 17386939 (-)
G147426 NA non-coding downstream 11266 17381617 ~ 17382570 (-)
G147423 NA non-coding downstream 17030 17376306 ~ 17376806 (-)
G147417 NA non-coding downstream 33240 17359558 ~ 17360596 (-)
G147448 NA non-coding upstream 63350 17458526 ~ 17458943 (-)
G147457 NA non-coding upstream 108467 17503643 ~ 17504912 (-)
G147468 NA non-coding upstream 159589 17554765 ~ 18033374 (-)
G147478 dpysl3,LOC107661764,LOC107742441,LOC107603222,LOC107713594,LOC107692982,LOC107562900 non-coding upstream 189892 17585068 ~ 17588374 (-)
G147474 NA non-coding upstream 281747 17676923 ~ 17677980 (-)
fstl4 fstl4,LOC107692968,LOC107739207,LOC107566247,LOC106603823 other downstream 139464 17094588 ~ 17254372 (-)
frmd7 frmd7,LOC107715942,LOC107692958,LOC107577182 other downstream 546615 16838338 ~ 16847221 (-)
LOC122326138 tmlhe,LOC107742426,LOC107703088,LOC107661707,LOC107715863 other downstream 663806 16719072 ~ 16730030 (-)
LOC122326634 ppp1r36 other downstream 759939 16627206 ~ 16633897 (-)
G147087 NA other downstream 1054120 16339227 ~ 16339716 (-)
LOC122326388 stk10,LOC107661763,LOC107692983,LOC107742442 other upstream 494056 17889232 ~ 17930161 (-)
G147526 LOC107661679,LOC107728278,LOC107562904 other upstream 731053 18126229 ~ 18127999 (-)
G147531 NA other upstream 774904 18170080 ~ 18170584 (-)
G147673 gabrg2,LOC107661671,LOC107692990,LOC107603256 other upstream 962392 18357568 ~ 18468851 (-)
rbm11 LOC107572385 other upstream 1154355 18549531 ~ 18553001 (-)

Expression


Co-expression Network