LOC122326313 (LOC107728266)


Basic Information

Item Value
gene id LOC122326313
gene name LOC107728266
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 17463280 ~ 17480039 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043221098.1
GTCATGTGTCATTCGTTCAGTTGTTGACTAGTAGGTTTAAGTTCACCTGACTTTAACCCAACCCATGAGCGCGTGCGAGCGGAGGAACCGGTAAAACACGGTGAAACCTCTTCATTCCTCCAGAAGAACATCACCGAGATGTCGGACCCTCCTGATATCATACCCGTGCCGAAGCCACGATCCAGATATTTTCTGTTAGATGCGGGACAGCCGTCGTCTAGTGAACGAAATGTCCAGTCGTCTTGTCCAGACGTTACAGCTGAAACACAGACAGAATCTGAAGTAGAAACCATTATCAGACGCGAGGTTAATGTGGATGACTTCATCCCTGCACCTCCTGATCCTCAACATGCGTCGCCAGAGTCGCTCTCAGTTAGTTCCAGTCCGTCTCCAGATGCGGCGAGAGCTCCTGATTCAGCGTTTTCTGAGGACAGGCCGGCGACTCCAGACTTGCTCAGCAACGATCACAGTTTCACAGATCAGGGGATGGATGTTCGGACAGACGTTTGCACCAATGGAGAGATCCATCAAGCTCCTAAATCACCGGATCTTCAGAACAAACCTGACAGACCCAATAAACCAAGGGCTGCAACTATTCGTGTGAGCAGAAAGAAGCAGACGTTATCAGGGCCGCGGCAGAAAGCCGGCGCGTCTCACAGTGAGTGTGCGGTGGCACAGGCCAGCTGGCTCGACGTATGGAAGGGACGCAAGCACACTGTTCTGTGGACCACTCATGATGGACACGTCATCTCAATGTGGAAAAAGCGCACAGACAAGTTCACAGAATACGTGTTTCACGTAACAAGCATCACTAACATACGTGAGCAGGATCATGGGCGCTTCTCCATCCATTTACAGAAGAAGCACTTTGAATTCATGGCTAACAGTGAGGCGGTGCGGAAGCTCTGGTTGACGTCTCTCTATGCCAGTCGAGGAAAGGAACCGATGGCTGCGCCCAAACAACACGGACCGCTGGTCATGAAAGACCCGCGGAAAAAGGTGTACACTGCTATCCGCGGACACTCCCTTTGGATATACAGCAGCAAAGAGGACTTCAGCATAGGTCTTGGCATGATGTGCGTGTCTATGAATATAGCGTCTGTGAAGGCGACGGGCCGTCACAGCTTCACTCTCATTACTCCATACAGGACCTTCAATTTCTCTGCAGACTCCGCTAAGGAGACGGCAGCGTGGCTGGAGAGTCTGAACGACGTGATCCGCAGCGCTCTGTCTCACAGCGAGGTGGCTCACCAACTCTGGTCCAGTCCCTGTAATAAGGTTTGCGGCGACTGTGGGGCGGCCAACCCAGAGTGGGCATCGGTGAACCTGCTGGTGGTCATCTGCGAGGCCTGCGCTGGAGCGCATCGATCCATGGGCAGCAACCGGTCCAAAGTGCGAGGTCTCAAACTAGATAATAAGGTTTGGACAGAGCCTTTAATTCAGTTGTTTGTGCTGTACGGAAATACAGCCTCCAGCAGGGTTTGGGGTCACAACATCCCTCCGATGGAGCAGATCGGCCCGAACGTCTCTCCGGATCAAAGGCTGGAGTTTGTCCTCGCCAAATACAGCAAAGGACTTTACCGCAAAGCTCACCCGCTCGCTGCGAACCAGAAGCTGCTTGACCAGAGGCTGCGGGAGGTGGTTTGTGGAGCCGATGTGGAGGAGACTCTGTCTCTGCTGTGCTCCGGAGCGAGGGTTTCGTGCAGCGGCACAGATCCCGAGCTCCGGTCGGCCATCATGGAGGCCGAGAGCGCTGGACAGGCCCTGCAGACCGAACTACTCCGACACAACGAGTTTGTGGagccacCCGACTTTGAGCAAACAAAACGTTCAGAGGAGCAGATAGAAGAGCTCCACGGAAAGCTGGATGAGGAGCGTTTCTTGTTCTCGCAGGAGAACGAGTCTGCGGCCTGCGACGTGCTGGATTTGAATGAAGTCATCTCAGTGTTCGACCGCTCTTCAGGGCAAACCCATGAGTTTGAGGTGTTATCCCTGACGGAGCGACTGATCTGTACGGCGGGCGGACGAGACGTCCTCCTCAGTCACATGCTGCACATCATGAAGGTAGTGCTGGCGGGGGCCGTGCCGGACGAGGATCTGCCGGGCGTCCGGGCCGTGTCCAGGGCCTCTATACGTCAGGGAGCGGCTCTCCAGAGCGCCGAGGTGTGGTGCACCCTGCAGGACGGAGAGATGAGCGTCCACCGCGGACACGGCTCCTCGGACACGCTGGCGCTGGACAACCGGACCCGCTGCCATCTGCAGCGCTCGGAGAACTGCATCCTGCTGGAGCTGCCCGAGCGGACGTTACACATGAAGTTTGAGCTGGAGCACAGCTGCGTTCGGTGGCATGAGCTGGTGCTGAGGGCCCTGCGCTCGAGCACAGATGGGCCCCGGCGCTCAGGGGCCGTGCCCTGCTCTGTAGAGCGCTGTATCTCTCACATCACACAGTACGGGCTGAAGGTGGAGGGTTTGTACCGGCGCTGCGGGGTCCTTCCTCAGATCAGTAGACTGGTGGACGCTCTGGGTGTTTCTCCGAGAGAAACGCTTCTGGGAACGGACGAGCTCTCCATCCTGGACGTCTCGGGAGCTCTGAAGCAGATCCTGCGGCAGAGCTGCCAGCTCATACCGGACGCTCACAAGCCGCTCTGGCTCAAAGCCGCCGTCCTGTCAGACGGAGATCAGAGACTGCAGACGTACCGCAGACTGCTCAGACGACTTCCTCCAGACAGCCGCGTGACTCTGGCCGCTCTGTGCCGACACCTGCACACggttCAGACGCACAATCAGGAGAACCTGATGACGGCTCATAACCTGGCCGTGATATTTGTGGTCACGCTGTTCCAGGAGCTGGCCATGAACACAGGCTTGGTCCACCTCACCAAAGAGCTGATCCTGCGCCACAGCGAGATCTTCACGGTGAGCTGCACTCTCACAGTAAACCATGCCACGCTCTCAACGTCCCAGAAATGACCGTGTCTTCTGACATTGT
>XM_043221099.1
GTCATGTGTCATTCGTTCAGTTGTTGACTAGTAGGTTTAAGTTCACCTGACTTTAACCCAACCCATGAGCGCGTGCGAGCGGAGGAACCGGTAAAACACGGTGAAACCTCTTCATTCCTCCAGAAGAACATCACCGAGATGTCGGACCCTCCTGATATCATACCCGTGCCGAAGCCACGATCCAGATATTTTCTGTTAGATGCGGGACAGCCGTCGTCTAGTGAACGAAATGTCCAGTCGTCTTGTCCAGACGTTACAGCTGAAACACAGACAGAATCTGAAGAAACCATTATCAGACGCGAGGTTAATGTGGATGACTTCATCCCTGCACCTCCTGATCCTCAACATGCGTCGCCAGAGTCGCTCTCAGTTAGTTCCAGTCCGTCTCCAGATGCGGCGAGAGCTCCTGATTCAGCGTTTTCTGAGGACAGGCCGGCGACTCCAGACTTGCTCAGCAACGATCACAGTTTCACAGATCAGGGGATGGATGTTCGGACAGACGTTTGCACCAATGGAGAGATCCATCAAGCTCCTAAATCACCGGATCTTCAGAACAAACCTGACAGACCCAATAAACCAAGGGCTGCAACTATTCGTGTGAGCAGAAAGAAGCAGACGTTATCAGGGCCGCGGCAGAAAGCCGGCGCGTCTCACAGTGAGTGTGCGGTGGCACAGGCCAGCTGGCTCGACGTATGGAAGGGACGCAAGCACACTGTTCTGTGGACCACTCATGATGGACACGTCATCTCAATGTGGAAAAAGCGCACAGACAAGTTCACAGAATACGTGTTTCACGTAACAAGCATCACTAACATACGTGAGCAGGATCATGGGCGCTTCTCCATCCATTTACAGAAGAAGCACTTTGAATTCATGGCTAACAGTGAGGCGGTGCGGAAGCTCTGGTTGACGTCTCTCTATGCCAGTCGAGGAAAGGAACCGATGGCTGCGCCCAAACAACACGGACCGCTGGTCATGAAAGACCCGCGGAAAAAGGTGTACACTGCTATCCGCGGACACTCCCTTTGGATATACAGCAGCAAAGAGGACTTCAGCATAGGTCTTGGCATGATGTGCGTGTCTATGAATATAGCGTCTGTGAAGGCGACGGGCCGTCACAGCTTCACTCTCATTACTCCATACAGGACCTTCAATTTCTCTGCAGACTCCGCTAAGGAGACGGCAGCGTGGCTGGAGAGTCTGAACGACGTGATCCGCAGCGCTCTGTCTCACAGCGAGGTGGCTCACCAACTCTGGTCCAGTCCCTGTAATAAGGTTTGCGGCGACTGTGGGGCGGCCAACCCAGAGTGGGCATCGGTGAACCTGCTGGTGGTCATCTGCGAGGCCTGCGCTGGAGCGCATCGATCCATGGGCAGCAACCGGTCCAAAGTGCGAGGTCTCAAACTAGATAATAAGGTTTGGACAGAGCCTTTAATTCAGTTGTTTGTGCTGTACGGAAATACAGCCTCCAGCAGGGTTTGGGGTCACAACATCCCTCCGATGGAGCAGATCGGCCCGAACGTCTCTCCGGATCAAAGGCTGGAGTTTGTCCTCGCCAAATACAGCAAAGGACTTTACCGCAAAGCTCACCCGCTCGCTGCGAACCAGAAGCTGCTTGACCAGAGGCTGCGGGAGGTGGTTTGTGGAGCCGATGTGGAGGAGACTCTGTCTCTGCTGTGCTCCGGAGCGAGGGTTTCGTGCAGCGGCACAGATCCCGAGCTCCGGTCGGCCATCATGGAGGCCGAGAGCGCTGGACAGGCCCTGCAGACCGAACTACTCCGACACAACGAGTTTGTGGagccacCCGACTTTGAGCAAACAAAACGTTCAGAGGAGCAGATAGAAGAGCTCCACGGAAAGCTGGATGAGGAGCGTTTCTTGTTCTCGCAGGAGAACGAGTCTGCGGCCTGCGACGTGCTGGATTTGAATGAAGTCATCTCAGTGTTCGACCGCTCTTCAGGGCAAACCCATGAGTTTGAGGTGTTATCCCTGACGGAGCGACTGATCTGTACGGCGGGCGGACGAGACGTCCTCCTCAGTCACATGCTGCACATCATGAAGGTAGTGCTGGCGGGGGCCGTGCCGGACGAGGATCTGCCGGGCGTCCGGGCCGTGTCCAGGGCCTCTATACGTCAGGGAGCGGCTCTCCAGAGCGCCGAGGTGTGGTGCACCCTGCAGGACGGAGAGATGAGCGTCCACCGCGGACACGGCTCCTCGGACACGCTGGCGCTGGACAACCGGACCCGCTGCCATCTGCAGCGCTCGGAGAACTGCATCCTGCTGGAGCTGCCCGAGCGGACGTTACACATGAAGTTTGAGCTGGAGCACAGCTGCGTTCGGTGGCATGAGCTGGTGCTGAGGGCCCTGCGCTCGAGCACAGATGGGCCCCGGCGCTCAGGGGCCGTGCCCTGCTCTGTAGAGCGCTGTATCTCTCACATCACACAGTACGGGCTGAAGGTGGAGGGTTTGTACCGGCGCTGCGGGGTCCTTCCTCAGATCAGTAGACTGGTGGACGCTCTGGGTGTTTCTCCGAGAGAAACGCTTCTGGGAACGGACGAGCTCTCCATCCTGGACGTCTCGGGAGCTCTGAAGCAGATCCTGCGGCAGAGCTGCCAGCTCATACCGGACGCTCACAAGCCGCTCTGGCTCAAAGCCGCCGTCCTGTCAGACGGAGATCAGAGACTGCAGACGTACCGCAGACTGCTCAGACGACTTCCTCCAGACAGCCGCGTGACTCTGGCCGCTCTGTGCCGACACCTGCACACggttCAGACGCACAATCAGGAGAACCTGATGACGGCTCATAACCTGGCCGTGATATTTGTGGTCACGCTGTTCCAGGAGCTGGCCATGAACACAGGCTTGGTCCACCTCACCAAAGAGCTGATCCTGCGCCACAGCGAGATCTTCACGGTGAGCTGCACTCTCACAGTAAACCATGCCACGCTCTCAACGTCCCAGAAATGACCGTGTCTTCTGACATTGT
>XM_043221100.1
GTCATGTGTCATTCGTTCAGTTGTTGACTAGTAGGTTTAAGTTCACCTGACTTTAACCCAACCCATGAGCGCGTGCGAGCGGAGGAACCGGTAAAACACGGTGAAACCTCTTCATTCCTCCAGAAGAACATCACCGAGATGTCGGACCCTCCTGATATCATACCCGTGCCGAAGCCACGATCCAGATATTTTCTGTTAGATGCGGGACAGCCGTCGTCTAGTGAACGAAATGTCCAGTCGTCTTGTCCAGACGTTACAGCTGAAACACAGACAGAATCTGAAGTAGAAACCATTATCAGACGCGAGGTTAATGTGGATGACTTCATCCCTGCACCTCCTGATCCTCAACATGCGTCGCCAGAGTCGCTCTCAGTTAGTTCCAGTCCGTCTCCAGATGCGGCGAGAGCTCCTGATTCAGCGTTTTCTGAGGACAGGCCGGCGACTCCAGACTTGCTCAGCAACGATCACAGTTTCACAGATCAGGGGATGGATGTTCGGACAGACGTTTGCACCAATGGAGAGATCCATCAAGCTCCTAAATCACCGGATCTTCAGAACAAACCTGACAGACCCAATAAACCAAGGGCTGCAACTATTCGTGTGAGCAGAAAGAAGCAGACGTTATCAGGGCCGCGGCAGAAAGCCGGCGCGTCTCACAGTGAGTGTGCGGTGGCACAGGCCAGCTGGCTCGACGTATGGAAGGGACGCAAGCACACTGTTCTGTGGACCACTCATGATGGACACGTCATCTCAATGTGGAAAAAGCGCACAGACAAGTTCACAGAATACGTGTTTCACGTAACAAGCATCACTAACATACGTGAGCAGGATCATGGGCGCTTCTCCATCCATTTACAGAAGAAGCACTTTGAATTCATGGCTAACAGTGAGGCGGTGCGGAAGCTCTGGTTGACGTCTCTCTATGCCAGTCGAGGAAAGGAACCGATGGCTGCGCCCAAACAACACGGACCGCTGGTCATGAAAGACCCGCGGAAAAAGGTGTACACTGCTATCCGCGGACACTCCCTTTGGATATACAGCAGCAAAGAGGACTTCAGCATAGGTCTTGGCATGATGTGCGTGTCTATGAATATAGCGTCTGTGAAGGCGACGGGCCGTCACAGCTTCACTCTCATTACTCCATACAGGACCTTCAATTTCTCTGCAGACTCCGCTAAGGAGACGGCAGCGTGGCTGGAGAGTCTGAACGACGTGATCCGCAGCGCTCTGTCTCACAGCGAGGTGGCTCACCAACTCTGGTCCAGTCCCTGTAATAAGGTTTGCGGCGACTGTGGGGCGGCCAACCCAGAGTGGGCATCGGTGAACCTGCTGGTGGTCATCTGCGAGGCCTGCGCTGGAGCGCATCGATCCATGGGCAGCAACCGGTCCAAAGTGCGAGGTCTCAAACTAGATAATAAGGTTTGGACAGAGCCTTTAATTCAGTTGTTTGTGCTGTACGGAAATACAGCCTCCAGCAGGGTTTGGGGTCACAACATCCCTCCGATGGAGCAGATCGGCCCGAACGTCTCTCCGGATCAAAGGCTGGAGTTTGTCCTCGCCAAATACAGCAAAGGACTTTACCGCAAAGCTCACCCGCTCGCTGCGAACCAGAAGCTGCTTGACCAGAGGCTGCGGGAGGTGGTTTGTGGAGCCGATGTGGAGGAGACTCTGTCTCTGCTGTGCTCCGGAGCGAGGGTTTCGTGCAGCGGCACAGATCCCGAGCTCCGGTCGGCCATCATGGAGGCCGAGAGCGCTGGACAGGCCCTGCAGACCGAACTACTCCGACACAACGAGTTTGTGGagccacCCGACTTTGAGCAAACAAAACGTTCAGAGGAGCAGATAGAAGAGCTCCACGGAAAGCTGGATGAGGAGCGTTTCTTGTTCTCGCAGGAGAACGAGTCTGCGGCCTGCGACGTGCTGGATTTGAATGAAGTCATCTCAGTGTTCGACCGCTCTTCAGGGCAAACCCATGAGTTTGAGGTGTTATCCCTGACGGAGCGACTGATCTGTACGGCGGGCGGACGAGACGTCCTCCTCAGTCACATGCTGCACATCATGAAGGTAGTGCTGGCGGGGGCCGTGCCGGACGAGGATCTGCCGGGCGTCCGGGCCGTGTCCAGGGCCTCTATACGTCAGGGAGCGGCTCTCCAGAGCGCCGAGGTGTGGTGCACCCTGCAGGACGGAGAGATGAGCGTCCACCGCGGACACGGCTCCTCGGACACGCTGGCGCTGGACAACCGGACCCGCTGCCATCTGCAGCGCTCGGAGAACTGCATCCTGCTGGAGCTGCCCGAGCGGACGTTACACATGAAGTTTGAGCTGGAGCACAGCTGCGTTCGGTGGCATGAGCTGGTGCTGAGGGCCCTGCGCTCGAGCACAGATGGGCCCCGGCGCTCAGGGGCCGTGCCCTGCTCTGTAGAGCGCTGTATCTCTCACATCACACAGTACGGGCTGAAGGTGGAGGGTTTGTACCGGCGCTGCGGGGTCCTTCCTCAGATCAGTAGACTGGTGGACGCTCTGGGTGTTTCTCCGAGAGAAACGCTTCTGGGAACGGACGAGCTCTCCATCCTGGACGTCTCGGGAGCTCTGAAGCAGATCCTGCGGCAGAGCTGCCAGCTCATACCGGACGCTCACAAGCCGCTCTGGCTCAAAGCCGCCGTCCTGTCAGACGGAGATCAGAGACTGCAGACGTACCGCAGACTGCTCAGACGACTTCCTCCAGACAGCCGCGTGACTCTGGCCGCTCTGTGCCGACACCTGCACACggttCAGACGCACAATCAGGAGAACCTGATGACGGCTCATAACCTGGCCGTGATATTTGTGGTCACGCTGTTCCAGGAGCTGGCCATGAACACAGGCTTGGTCCACCTCACCAAAGAGCTGATCCTGCGCCACAGCGAGATCTTCACGAATCACgtggagacagacagagagatcaTCACCGTACTGTGAGGAGCTCCCCGTCAGCACCACCATGACTGCATGAACAAATGACTGTAATAATgtagcagtgaatgggtgccgtcagaataagagtccaaactgctgataagAACTTAATAGTCCACCAATGAATGcattgagaagaaaaaaagctgcCTGGTGAATCTGAGATCCTCTTTAGATGCAAGTGGGGTTTTGATACCAACACGAGGAGGGGATCAAGAAAAGAAGACAAGCCCACTATCAATGGGTGAAGAAGAGTTGAATGCTTCAAGAGATGCGTCCACGGTCTTTAATGTCACAATATATTAACTTCAATCGTTCTTATCATGCAGGCCATAAAATGTCCGGTGGTACAGATATAATGAAGGACAGACTGCGTTCCAGAGTGTGTTATGCTTTTATCGTTACTCAGGATTACACAAGCTtttgtatttatgaataaatgagtTGAAACAGGTGCATTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043221098.1 False 2989 mRNA 0.56 22 17463788 17480039
XM_043221099.1 False 2986 mRNA 0.56 22 17463788 17480039
XM_043221100.1 True 3418 mRNA 0.54 23 17463280 17480039

Neighbor

gene id symbol gene type direction distance location
cdkn2aipnl NA coding downstream 42838 17417820 ~ 17420442 (-)
ppp2cab ppp2ca,LOC107603261,LOC107692973,LOC107728270,LOC107564119,LOC105021738 coding downstream 50900 17405359 ~ 17412380 (-)
skp1 skp1,Skp1,LOC105912995 coding downstream 58841 17399856 ~ 17404439 (-)
vdac1 vdac1,LOC107557296,LOC107692970,LOC107728276 coding downstream 132136 17321620 ~ 17331144 (-)
c21h5orf15 si:ch73-269m14.2,cunh5orf15,kct2,clg07h5orf15,LOC106603818 coding downstream 142924 17315412 ~ 17320356 (-)
oatx oatx,LOC107562907,LOC107742468,LOC107661788,LOC107692946,LOC107728280,LOC108440612 coding upstream 370 17480409 ~ 17488904 (-)
stk32a stk32a,LOC107661787,LOC107562910,LOC107692947,LOC108414397 coding upstream 111047 17591086 ~ 17627844 (-)
LOC122326387 LOC107742460,LOC107603220,LOC107661762 coding upstream 231216 17711255 ~ 17712135 (-)
LOC122326718 LOC107742471,LOC107661810,LOC107580836 coding upstream 450363 17930402 ~ 17932657 (-)
LOC122326376 LOC107603239,LOC107742469 coding upstream 610840 18090879 ~ 18100510 (-)
G147448 NA non-coding downstream 4337 17458526 ~ 17458943 (-)
G147430 NA non-coding downstream 68104 17393836 ~ 17395176 (-)
G147418 NA non-coding downstream 71055 17391057 ~ 17392225 (-)
G147427 NA non-coding downstream 76341 17382744 ~ 17386939 (-)
G147426 NA non-coding downstream 80710 17381617 ~ 17382570 (-)
G147457 NA non-coding upstream 23604 17503643 ~ 17504912 (-)
G147468 NA non-coding upstream 74726 17554765 ~ 18033374 (-)
G147478 dpysl3,LOC107661764,LOC107742441,LOC107603222,LOC107713594,LOC107692982,LOC107562900 non-coding upstream 105029 17585068 ~ 17588374 (-)
G147474 NA non-coding upstream 196884 17676923 ~ 17677980 (-)
G147496 NA non-coding upstream 398623 17878662 ~ 17883014 (-)
fstl4 fstl4,LOC107692968,LOC107739207,LOC107566247,LOC106603823 other downstream 208908 17094588 ~ 17254372 (-)
frmd7 frmd7,LOC107715942,LOC107692958,LOC107577182 other downstream 616059 16838338 ~ 16847221 (-)
LOC122326138 tmlhe,LOC107742426,LOC107703088,LOC107661707,LOC107715863 other downstream 733250 16719072 ~ 16730030 (-)
LOC122326634 ppp1r36 other downstream 829383 16627206 ~ 16633897 (-)
G147087 NA other downstream 1123564 16339227 ~ 16339716 (-)
LOC122326388 stk10,LOC107661763,LOC107692983,LOC107742442 other upstream 409193 17889232 ~ 17930161 (-)
G147526 LOC107661679,LOC107728278,LOC107562904 other upstream 646190 18126229 ~ 18127999 (-)
G147531 NA other upstream 690041 18170080 ~ 18170584 (-)
G147673 gabrg2,LOC107661671,LOC107692990,LOC107603256 other upstream 877529 18357568 ~ 18468851 (-)
rbm11 LOC107572385 other upstream 1069492 18549531 ~ 18553001 (-)

Expression


Co-expression Network