LOC122326718 (LOC107742471,LOC107661810,LOC107580836)


Basic Information

Item Value
gene id LOC122326718
gene name LOC107742471,LOC107661810,LOC107580836
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 17930402 ~ 17932657 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043221833.1
AGCACAAGATGTTTGAGCGCGGGGAGGTGTATAAATGCAGCGGCGCCGGGGACAGACCCCAGACAGCATGCTCTCCCTCACGCTGCTCCTGCTCCTGGCCGTCCCGGAGCTCCAGGCTCAGCCCTATCCCATCCCGCCCACCTGCTACTCCAAAGTGCTGGCCATGGGCAAGGAGATCACCCAGAGAGCGGCCCAGATCAAGACGGACCGCGACACCCACGGATGCACCGCTCACCTGCCCGACCTCTACATCGACGTCCACAACGCCTGCCTGATGTCCACCATGAGCTCGTATCAGACTCTGCTGGACGCTCTGAGGGAGCGCAGATGTTCTTACACCAGGAAAGTGCAGCATCTCCGTGCCACCATCAGACAGCTCCAGATCATCATGTCACAGAAATGTCACGGGGAGCTGGTTTATACTCATGATAACTGTGAGGCGCTACATCACAGAAGATGGAGAGGATGAAATCACTTCAGACGTCACTGGACAAAGAGTGCTCCTCGTATGTTATTCATAACCAGTAGCATGGAGAACGTAATCACGACTTGATTTGTTTGTATTATCCTGCATGCTTATGCCAAATTAACACAGCTTTGATGTAGGCCGCAGAACTGTTCAAATCTTagcaatatttcaaaaataaattcgTTAAGAAAAATCGGAAACACTGTGATGTAGTGTTAGCATAGAATACGAATggacatttattgcatttttgaataCCTTAAAAGAAAGAGATTATCAAGTCAGTGACCCACAGGCATATCTAATATATCacttattattttgaatgtttattgttttaaatatacatatcatTAAATTCAACATGTGCATTTTTTGGTatcattttttacatgttttctgTTCTCTAATAAATAACCGTACCACATATTACCACTAGGTGGGGGTTGTgt

Function

NR:

description
PREDICTED: cytokine-like protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043221833.1 True 921 mRNA 0.46 4 17930402 17932657

Neighbor

gene id symbol gene type direction distance location
LOC122326387 LOC107742460,LOC107603220,LOC107661762 coding downstream 218267 17711255 ~ 17712135 (-)
stk32a stk32a,LOC107661787,LOC107562910,LOC107692947,LOC108414397 coding downstream 302558 17591086 ~ 17627844 (-)
oatx oatx,LOC107562907,LOC107742468,LOC107661788,LOC107692946,LOC107728280,LOC108440612 coding downstream 441498 17480409 ~ 17488904 (-)
LOC122326313 LOC107728266 coding downstream 450363 17463280 ~ 17480039 (-)
cdkn2aipnl NA coding downstream 509960 17417820 ~ 17420442 (-)
LOC122326376 LOC107603239,LOC107742469 coding upstream 158222 18090879 ~ 18100510 (-)
LOC122326768 LOC107661674,LOC107692986,LOC103038806,LOC108413784,LOC106567507,LOC105011225 coding upstream 330873 18263530 ~ 18332790 (-)
poglut3 kdelc2 coding upstream 565182 18497839 ~ 18534563 (-)
tmprss15 tmprss15 coding upstream 602016 18534673 ~ 18549914 (-)
si:dkey-71d15.2 LOC107757853,LOC107603213 coding upstream 627695 18560352 ~ 18564964 (-)
G147496 NA non-coding downstream 47388 17878662 ~ 17883014 (-)
G147474 NA non-coding downstream 252422 17676923 ~ 17677980 (-)
G147478 dpysl3,LOC107661764,LOC107742441,LOC107603222,LOC107713594,LOC107692982,LOC107562900 non-coding downstream 342028 17585068 ~ 17588374 (-)
G147457 NA non-coding downstream 425490 17503643 ~ 17504912 (-)
G147448 NA non-coding downstream 471459 17458526 ~ 17458943 (-)
G147520 NA non-coding upstream 133623 18066280 ~ 18067943 (-)
G147671 NA non-coding upstream 398504 18331161 ~ 18408450 (-)
G147714 NA non-coding upstream 663428 18596085 ~ 18597397 (-)
G147718 larp1,LOC107757874,LOC107668436,LOC107571607,LOC107713603 non-coding upstream 671551 18604208 ~ 18605161 (-)
G147741 ddx46,LOC107668438,LOC107713612,LOC107571605,LOC107757870 non-coding upstream 777995 18710652 ~ 18712050 (-)
LOC122326388 stk10,LOC107661763,LOC107692983,LOC107742442 other downstream 241 17889232 ~ 17930161 (-)
fstl4 fstl4,LOC107692968,LOC107739207,LOC107566247,LOC106603823 other downstream 676030 17094588 ~ 17254372 (-)
frmd7 frmd7,LOC107715942,LOC107692958,LOC107577182 other downstream 1083181 16838338 ~ 16847221 (-)
LOC122326138 tmlhe,LOC107742426,LOC107703088,LOC107661707,LOC107715863 other downstream 1200372 16719072 ~ 16730030 (-)
LOC122326634 ppp1r36 other downstream 1296505 16627206 ~ 16633897 (-)
G147526 LOC107661679,LOC107728278,LOC107562904 other upstream 193572 18126229 ~ 18127999 (-)
G147531 NA other upstream 237423 18170080 ~ 18170584 (-)
G147673 gabrg2,LOC107661671,LOC107692990,LOC107603256 other upstream 424911 18357568 ~ 18468851 (-)
rbm11 LOC107572385 other upstream 616874 18549531 ~ 18553001 (-)
G147728 NA other upstream 766965 18699622 ~ 18701062 (-)

Expression


Co-expression Network