LOC122326387 (LOC107742460,LOC107603220,LOC107661762)


Basic Information

Item Value
gene id LOC122326387
gene name LOC107742460,LOC107603220,LOC107661762
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 17711255 ~ 17712135 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043221247.1
ATGAGAGATGGCAGCATCCACAAGGGAACAGATATCGTGTGCGGTGATGACGGCATCGTCAATGCTCCTTTTTCTGGAAACCTGGCCGGTCCTGTTGAGAGAGCAGTGGGAGACTCTCTTCAATACGATGGCGTCAAACTCTACAACAAAGTGCATTGTGTGAAGATCTTCAACGTCCGGGGCTCTGTAGTTCAGGGAGAGGCCATGGGTTACCTGTTACCTCTGCAGGAGCGTTTTCCTGGCATCACCTCACACCTGGAGCTTCAGATGTGTGACGGCTCTGATCCCTCGCCCTTCATATGA

Function

NR:

description
PREDICTED: leukocyte cell-derived chemotaxin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043221247.1 True 303 mRNA 0.52 3 17711255 17712135

Neighbor

gene id symbol gene type direction distance location
stk32a stk32a,LOC107661787,LOC107562910,LOC107692947,LOC108414397 coding downstream 83411 17591086 ~ 17627844 (-)
oatx oatx,LOC107562907,LOC107742468,LOC107661788,LOC107692946,LOC107728280,LOC108440612 coding downstream 222351 17480409 ~ 17488904 (-)
LOC122326313 LOC107728266 coding downstream 231216 17463280 ~ 17480039 (-)
cdkn2aipnl NA coding downstream 290813 17417820 ~ 17420442 (-)
ppp2cab ppp2ca,LOC107603261,LOC107692973,LOC107728270,LOC107564119,LOC105021738 coding downstream 298875 17405359 ~ 17412380 (-)
LOC122326718 LOC107742471,LOC107661810,LOC107580836 coding upstream 218267 17930402 ~ 17932657 (-)
LOC122326376 LOC107603239,LOC107742469 coding upstream 378744 18090879 ~ 18100510 (-)
LOC122326768 LOC107661674,LOC107692986,LOC103038806,LOC108413784,LOC106567507,LOC105011225 coding upstream 551395 18263530 ~ 18332790 (-)
poglut3 kdelc2 coding upstream 785704 18497839 ~ 18534563 (-)
tmprss15 tmprss15 coding upstream 822538 18534673 ~ 18549914 (-)
G147474 NA non-coding downstream 33275 17676923 ~ 17677980 (-)
G147478 dpysl3,LOC107661764,LOC107742441,LOC107603222,LOC107713594,LOC107692982,LOC107562900 non-coding downstream 122881 17585068 ~ 17588374 (-)
G147457 NA non-coding downstream 206343 17503643 ~ 17504912 (-)
G147448 NA non-coding downstream 252312 17458526 ~ 17458943 (-)
G147430 NA non-coding downstream 316079 17393836 ~ 17395176 (-)
G147496 NA non-coding upstream 166527 17878662 ~ 17883014 (-)
G147520 NA non-coding upstream 354145 18066280 ~ 18067943 (-)
G147671 NA non-coding upstream 619026 18331161 ~ 18408450 (-)
G147714 NA non-coding upstream 883950 18596085 ~ 18597397 (-)
G147718 larp1,LOC107757874,LOC107668436,LOC107571607,LOC107713603 non-coding upstream 892073 18604208 ~ 18605161 (-)
fstl4 fstl4,LOC107692968,LOC107739207,LOC107566247,LOC106603823 other downstream 456883 17094588 ~ 17254372 (-)
frmd7 frmd7,LOC107715942,LOC107692958,LOC107577182 other downstream 864034 16838338 ~ 16847221 (-)
LOC122326138 tmlhe,LOC107742426,LOC107703088,LOC107661707,LOC107715863 other downstream 981225 16719072 ~ 16730030 (-)
LOC122326634 ppp1r36 other downstream 1077358 16627206 ~ 16633897 (-)
G147087 NA other downstream 1371539 16339227 ~ 16339716 (-)
LOC122326388 stk10,LOC107661763,LOC107692983,LOC107742442 other upstream 177097 17889232 ~ 17930161 (-)
G147526 LOC107661679,LOC107728278,LOC107562904 other upstream 414094 18126229 ~ 18127999 (-)
G147531 NA other upstream 457945 18170080 ~ 18170584 (-)
G147673 gabrg2,LOC107661671,LOC107692990,LOC107603256 other upstream 645433 18357568 ~ 18468851 (-)
rbm11 LOC107572385 other upstream 837396 18549531 ~ 18553001 (-)

Expression


Co-expression Network