c21h5orf15 (si:ch73-269m14.2,cunh5orf15,kct2,clg07h5orf15,LOC106603818)


Basic Information

Item Value
gene id c21h5orf15
gene name si:ch73-269m14.2,cunh5orf15,kct2,clg07h5orf15,LOC106603818
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 17315412 ~ 17320356 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043221879.1
CTGAACAGAGAGAACGTCGGCGCATGCGCGCTGATGACGTCAGCACCGAAGATGGCGGCGGTGCGGAAGACGGGACTCGGAGATTTAGCGATGAGAATATTCGCGGTTTTGCTGTCACTGCAGATGCTTTCTGTGAGCTGCGAAACCGAAGCGCAAGACGTTGTGAATCAGGGGACAAACGCTAAACCCCCAATCTCCACTTTAGCATCTGATAAGAACCCGAGCGAAAAGAACGACAGCCTTCAGAGTCAAGCGGTCCAGGCGAACGCGACGCAGGCTCCCGATATCCCCAGCAGCCCCCAAGCGGCAGCCACGCCCTTCCCGGACGCTCTGCCCTCGACTGCTGAAACCACTCCCAAACAGACCACACCCACCGAAGACAAGCCTCCGGGGCCCACCGGCCCTCCAGCGAACAAGCCCACGGCCGTCTCCACCGCCGCGGCCGACAGAACTGAGAGCGCCTCGGACTACATCAGCGAGCGGACGTCTCCAGGAGCGGACTTATCCTTCGGAATCGAAGAGGAGGATAATTTCGAGAATAGCTTCACCGAGTCGCCTCGAAACAGCGTGAGGAAAGACCCTTTGGACCTCCCGGACAGCTCTAAAGAATTAATTGACCGCACAACCATCTACACCCAGGATGAAGATTCCCACTTCTTCTTTCACCTGGTCATCATCGCCTTTCTGGTGGCCATCGTGTACATCACCTACCACAACAAGAGGAAGCTGATGCTGCTGGCTCAGAGTCGTCGCTGGCGGGACGGTTTCTGCTCACGCGGCGTGGAGTACCACCGGCTCGACCAGAACGTCAACGAGGCCATGCCCTCGCTCAAGATGACCAACGATTACATCTTTTGAAGACAGTTGATTTCGATTTTGATACTTGATTtttgtccacacacacacacacgtggtgTCTTATTTAATCAGGGGAGGAGGGATCGTGTTTTAGCCGTGTGTTCGTGTGCACGAGAAGGTCTTCGGTTCTGCTTCTTGTTCTCCTCCGTGTTTTCTTCTATAAAGGCAAACGGCCTTGCTctaattttaacagtttttgaagaaaatcaAATGAAGTTGTGTctctgtaaatatttgattatatacCTGCTGTCTGTTGCGTACGCTCTAagaaataaaggtgcttcacaaaTGCCataaaagaacctttttttgtctaaatggttcatGCAGACCTTGCACGAAAGGTCCTTTGTGGAGAAAGAAacttcttcagattataaaaaaaaggcaaGGTTCTTTAAAGGAACCAAAAATGGCtcttctatggcattgctgTGAGCTCTGGTCAAACGAAGCCGTGCTGTCTCCGGCACAGCGctagatgtgtgtgtttcttgcCGTGCAGCCGTTTTTGGGCTGGTccctttctgtttgttttatgacttcagtGAAGTTCTTTTATAGGAGCCGGGTTCACCATTGCCAAAGCTCGGGAGATTTACAGgaaggttttgttttaattcaccAAGCATTGCCCCACGATTGTAGCAGCGGCAGCAGCAGCCAGAGGCGTCTTATATCAGTATGTGTGTGCAGATCtgctgagaacacacacacatcacagcaTCTTCATCTCTGATCTCCGTCAGGGCACGTGAAGTGTCTGTGCATGAAGACAGCATATCGAGTCCCTCTTCAATCAGTATGAATTACGCTCATCAATAAAGCACCTCTGTATGCACACA

Function

symbol description
si:ch73-269m14.2 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human C5orf15 (chromosome 5 open reading frame 15).

NR:

description
keratinocyte-associated transmembrane protein 2

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043221879.1 True 1706 mRNA 0.50 3 17315412 17320356

Neighbor

gene id symbol gene type direction distance location
zcchc10 zcchc10,LOC107562177,LOC107692962,LOC107603240,LOC107661792 coding downstream 378511 16933212 ~ 16936901 (-)
aff4 aff4,LOC107715968,LOC107692940 coding downstream 382334 16900947 ~ 16933078 (-)
shroom1 LOC107661693,LOC107742431,LOC107581967,LOC107715952 coding downstream 415724 16873986 ~ 16899688 (-)
sept8a sept8,sept8a,LOC103023804,LOC107104784,LOC103144874,LOC103369531 coding downstream 446406 16852067 ~ 16869006 (-)
atg4a atg4a,LOC107581879,LOC107661698,LOC107692955,LOC107562169 coding downstream 511118 16796134 ~ 16804294 (-)
vdac1 vdac1,LOC107557296,LOC107692970,LOC107728276 coding upstream 1264 17321620 ~ 17331144 (-)
skp1 skp1,Skp1,LOC105912995 coding upstream 79500 17399856 ~ 17404439 (-)
ppp2cab ppp2ca,LOC107603261,LOC107692973,LOC107728270,LOC107564119,LOC105021738 coding upstream 85003 17405359 ~ 17412380 (-)
cdkn2aipnl NA coding upstream 97464 17417820 ~ 17420442 (-)
LOC122326313 LOC107728266 coding upstream 142924 17463280 ~ 17480039 (-)
G147295 NA non-coding downstream 255346 17057878 ~ 17060066 (-)
G147265 NA non-coding downstream 368021 16946613 ~ 16947391 (-)
G147252 NA non-coding downstream 443355 16869670 ~ 16872057 (-)
LOC122326728 NA non-coding downstream 479909 16834707 ~ 16835503 (-)
G147239 NA non-coding downstream 497626 16817443 ~ 16817786 (-)
G147413 NA non-coding upstream 11444 17331800 ~ 17333076 (-)
G147414 NA non-coding upstream 21383 17341739 ~ 17342024 (-)
G147417 NA non-coding upstream 39202 17359558 ~ 17360596 (-)
G147423 NA non-coding upstream 55950 17376306 ~ 17376806 (-)
G147426 NA non-coding upstream 61261 17381617 ~ 17382570 (-)
fstl4 fstl4,LOC107692968,LOC107739207,LOC107566247,LOC106603823 other downstream 61040 17094588 ~ 17254372 (-)
frmd7 frmd7,LOC107715942,LOC107692958,LOC107577182 other downstream 468191 16838338 ~ 16847221 (-)
LOC122326138 tmlhe,LOC107742426,LOC107703088,LOC107661707,LOC107715863 other downstream 585382 16719072 ~ 16730030 (-)
LOC122326634 ppp1r36 other downstream 681515 16627206 ~ 16633897 (-)
G147087 NA other downstream 975696 16339227 ~ 16339716 (-)
LOC122326388 stk10,LOC107661763,LOC107692983,LOC107742442 other upstream 568876 17889232 ~ 17930161 (-)
G147526 LOC107661679,LOC107728278,LOC107562904 other upstream 805873 18126229 ~ 18127999 (-)
G147531 NA other upstream 849724 18170080 ~ 18170584 (-)
G147673 gabrg2,LOC107661671,LOC107692990,LOC107603256 other upstream 1037212 18357568 ~ 18468851 (-)
rbm11 LOC107572385 other upstream 1229175 18549531 ~ 18553001 (-)

Expression


Co-expression Network