LOC122327459


Basic Information

Item Value
gene id LOC122327459
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 4517432 ~ 4520223 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222844.1
CAGGTTTCAGTTTGAGAATCAGTAAAACGCATCCTGTGAGACGGAAGATGATTTTAACTGTGAATATgaatagaacttttttttttataaacctcGTTGAGAGCATGGAAATATAAAATAGGTGGGTCTTACACAGCTGTGGGAGGAATTGCAAACCGGATGAATAGGTCAGAAGTTTTCAGTAGATGCTTTTATTAGATCATACGTTTAGTGAACgtttagtttaataaaatatttcacatgtttttgctctgtttttgCTGGTGGCACCTGCTCGgtgtgtttggtgcTGCGACAAATGAAACGCAGTCAGTGTCAGTGACGGAGGGAGATTCTGTCATTCTTACCGGTAATGCTACTGAAATACATGAAAACGACGACTTACTATTGACTTTTGGAACTCTAAAGTCTCTCATAGatagaataaaaaaaccaaaacccaACTCCACGTATGCTGGTACCgatgagagattcagagacagactgaagctggatcatcagactggatctctgaccatcatgaacatcaCAACTCAACACGCTGGAGTTTATGAAGTACAGATTAGTGGAAAGAAACTGTTAACAAAAGTATTTAATGTTTCCGTCTATGCTCGTCTTCCTGTTCCTGTTGTCAGCAGTAACTCTTCAAACtgttcatcatcatcttcatcatcatcttgtTCGTTGTTGTGTTCGGCGGTGAACATGGGTCacgtgactctctcctggtacaaaggaaacagtttattgtccagcatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaacatcaggataaaaacacctacagctgtgtgatcaacaaccccatcagaaaccagaccacacatctgGACATCAGTCAACTCTGTCGTCCAAATCCAGATCAGGGCTTACCTTTGTTCCACAAAGTGTTGgtttctgctgctgctggatcTCTGTTGATCGTCGCTGCAGTCGTGATGTACTCcaagaaatgtagaaaaattgACAGAGAAGATCAGACTTGTGAAGAAATGATCATTTACGCAGAGCCAACGttgcacaaaagaaaaacacaattgaaaatcaaAGAGGAGACCCAAGTAGAGTATGCATCTGTCGCCATAAGAAGATgactgaatttttttatgtgcatcAGTCAATGTttatacactgaaaaaatgttatgtaacaTACCTTGTTACCCC

Function

GO:

id name namespace
GO:0002376 immune system process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222844.1 True 1209 mRNA 0.41 6 4517432 4520223

Neighbor

gene id symbol gene type direction distance location
LOC122327452 NA coding upstream 1574 4510037 ~ 4515858 (+)
LOC122327469 NA coding upstream 13736 4499226 ~ 4503696 (+)
LOC122327492 NA coding upstream 25379 4490424 ~ 4492053 (+)
LOC122327458 NA coding upstream 45639 4468782 ~ 4471793 (+)
LOC122327418 NA coding upstream 60325 4453360 ~ 4457107 (+)
LOC122327314 LOC107707332,LOC107694538 coding downstream 6669 4526892 ~ 4532083 (+)
LOC122327499 NA coding downstream 13498 4533721 ~ 4538567 (+)
LOC122328154 NA coding downstream 55344 4575567 ~ 4577779 (+)
LOC122327449 NA coding downstream 85826 4606049 ~ 4609920 (+)
LOC122327527 NA coding downstream 96530 4616753 ~ 4623349 (+)
LOC122327579 NA non-coding upstream 10136 4505012 ~ 4507296 (+)
G149274 LOC107698552,LOC107687331,LOC107566424,LOC107710492,LOC107755804,LOC107741386,LOC107580752,LOC107711595,LOC107723932 non-coding upstream 14126 4330902 ~ 4503306 (+)
LOC122327607 NA non-coding downstream 71598 4591821 ~ 4592182 (+)
G149339 NA non-coding downstream 94085 4614308 ~ 4614926 (+)
G149347 NA non-coding downstream 113019 4633242 ~ 4650364 (+)
G149349 NA non-coding downstream 115768 4635991 ~ 4675008 (+)
G149348 NA non-coding downstream 117594 4637817 ~ 4640329 (+)
LOC122327552 LOC107568440,LOC107698560 other upstream 96431 4419563 ~ 4421001 (+)
LOC122327447 LOC107741386,LOC107568440 other upstream 276645 4213226 ~ 4240787 (+)
LOC122327446 NA other upstream 458059 4053527 ~ 4059373 (+)
G149157 LOC107561598,LOC107717161,LOC107549384,LOC107742789,LOC107704500 other upstream 664061 3852063 ~ 3853371 (+)
LOC122328138 NA other upstream 737756 3777580 ~ 3779676 (+)
LOC122327412 LOC107698560 other downstream 177969 4698192 ~ 4730700 (+)
LOC122327517 NA other downstream 192639 4712862 ~ 4716003 (+)
LOC122328161 NA other downstream 471788 4992011 ~ 4998974 (+)
LOC122327529 NA other downstream 583270 5103493 ~ 5107424 (+)
G149646 NA other downstream 583306 5103529 ~ 5104436 (+)

Expression


Co-expression Network