LOC122327458


Basic Information

Item Value
gene id LOC122327458
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 4468782 ~ 4471793 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222843.1
gtgtgtcaaaaactaaaatctCTATCAAACGgacagcattttatatatttatatccatACGCAGAATCAATACGCAATCATAACGTGTCACGTGTGAACTATAGCGGGCTCAAAGTCAGTCGGGGGAGGATTCAGCGGGTCTCTTTAGATCAGATCTGTCGCTGAACAACTGAAGGAAATGTTCCACACACTTCTGTTCTGTTGGTGTTGTCTGACCGGTGTGTTTGGTGAATCGGTgtcagtgatggagggagattctGTCACTTTAAACACCGATCTCACTGAAATGCGTGAATATAGCAGCATACTGTGGAAATATGGATCTAAAAAGGCTCTAATTATTGAATGCAGCAGACTTTTTGGGATTTTCACACATAATTACACCgatgagagattcagagacagactgaagatagacgatcaaactggatctctgaccatcacgaaCATCTCAACTCCACACGCCGGAGATTATGAAGTAGAGATAAGTGGAATTAAAGTATCATCCAaagaatttagtttaaaaaacatCAACCACAGAGTTTCTGTCTATGCTCGTCTCCCCGTCCCTAACATCACTAGAGATTTTTCAGAAAATctatcatcatcttcatcatcaaaTTGTTCATTGTTGTGTTCGGCGGTGAACgtgggtcatgtgactctctcctggtacaaaggaaacagtttattgtccagcatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaacatcaggataaaaacacctacagctgtgtgatcaacaaccccatcagaaaccagaccacacatctgGACGTCTGTGAACTTTGTTTGTCATGTCCAGATCGAGGCTTACCATTATTGTACATAGCGCTGATTTCTGGATCTCTGTTGATCGTCGCTGCCGTCGTGATGTACTGCATCTGCAAGAAATGTGGAAAAACTGACAAAGAAGTTCAGACCTGTGAGGAAATGATAACTTATGCTGAGCCAACGATCTACAAAAGAAATGCACCAGCGaatgttAAAAACGAGGACAACGTGGTGTATGCACCTATCATCATGACAAGGTGATCGAGCTTTTCCTGAGCTGTACCCTATCTGTATTACCACTTAAACGTCCGTATAAAGTCTAGCGATGAGTTTTGGCCGGTGTCACATGCAAGACTTCAGGAAATGTTCTCTTTGATGTTCTGTTACCTTTTGTCCATCCATTAAAGGTCTGCAGCttcaaaagctaaataaaagctTGTTCGATGTGCAGAAACAA

Function

GO: NA

KEGG:

id description
ko03070 Bacterial secretion system

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222843.1 True 1274 mRNA 0.42 6 4468782 4471793

Neighbor

gene id symbol gene type direction distance location
LOC122327418 NA coding upstream 11675 4453360 ~ 4457107 (+)
LOC122327422 NA coding upstream 30160 4329196 ~ 4438622 (+)
LOC122327506 LOC107568440,LOC107741386 coding upstream 43203 4421156 ~ 4425579 (+)
LOC122328102 LOC107698560 coding upstream 60114 4382092 ~ 4408668 (+)
LOC122327471 LOC107698560 coding upstream 90047 4374805 ~ 4378735 (+)
LOC122327492 NA coding downstream 18631 4490424 ~ 4492053 (+)
LOC122327469 NA coding downstream 27433 4499226 ~ 4503696 (+)
LOC122327452 NA coding downstream 38244 4510037 ~ 4515858 (+)
LOC122327459 NA coding downstream 45639 4517432 ~ 4520223 (+)
LOC122327314 LOC107707332,LOC107694538 coding downstream 55099 4526892 ~ 4532083 (+)
LOC122327608 NA non-coding upstream 33122 4433817 ~ 4435660 (+)
LOC122327602 NA non-coding upstream 39560 4428315 ~ 4429222 (+)
G149266 NA non-coding upstream 91435 4282511 ~ 4377347 (+)
G149263 NA non-coding upstream 97647 4345277 ~ 4371135 (+)
LOC122327592 LOC107737287 non-coding upstream 156681 4308449 ~ 4312101 (+)
LOC122327579 NA non-coding downstream 33219 4505012 ~ 4507296 (+)
LOC122327607 NA non-coding downstream 120028 4591821 ~ 4592182 (+)
G149339 NA non-coding downstream 142515 4614308 ~ 4614926 (+)
G149347 NA non-coding downstream 161449 4633242 ~ 4650364 (+)
G149349 NA non-coding downstream 164198 4635991 ~ 4675008 (+)
LOC122327552 LOC107568440,LOC107698560 other upstream 47781 4419563 ~ 4421001 (+)
LOC122327447 LOC107741386,LOC107568440 other upstream 227995 4213226 ~ 4240787 (+)
LOC122327446 NA other upstream 409409 4053527 ~ 4059373 (+)
G149157 LOC107561598,LOC107717161,LOC107549384,LOC107742789,LOC107704500 other upstream 615411 3852063 ~ 3853371 (+)
LOC122328138 NA other upstream 689106 3777580 ~ 3779676 (+)
LOC122327412 LOC107698560 other downstream 226399 4698192 ~ 4730700 (+)
LOC122327517 NA other downstream 241069 4712862 ~ 4716003 (+)
LOC122328161 NA other downstream 520218 4992011 ~ 4998974 (+)
LOC122327529 NA other downstream 631700 5103493 ~ 5107424 (+)
G149646 NA other downstream 631736 5103529 ~ 5104436 (+)

Expression


Co-expression Network