Gene
RNA
| Item | Value |
|---|---|
| gene id | G16539 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 5617757 ~ 5618044 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU18523 | True | 288 | lncRNA | 0.39 | 1 | 5617757 | 5618044 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000001_05599133_05600420 | GUCA1B | coding | downstream | 16017 | 5598777 ~ 5601740 (-) |
| CI01000001_05594766_05595939 | OARD1 | coding | downstream | 21818 | 5594604 ~ 5595939 (-) |
| CI01000001_05575469_05577709 | EBP | coding | downstream | 40048 | 5574930 ~ 5577709 (-) |
| CI01000001_05544032_05558747 | PARD6B | coding | downstream | 59010 | 5543414 ~ 5558747 (-) |
| CI01000001_05509301_05539080 | ARFGEF2 | coding | downstream | 77199 | 5507976 ~ 5540558 (-) |
| CI01000001_05710029_05712242 | NA | coding | upstream | 91876 | 5709920 ~ 5712510 (-) |
| CI01000001_05738554_05751605 | NA | coding | upstream | 120083 | 5738127 ~ 5751605 (-) |
| CI01000001_05753118_05757768 | ASB14B | coding | upstream | 134987 | 5753031 ~ 5758402 (-) |
| CI01000001_05760403_05789161 | DNAH12 | coding | upstream | 142274 | 5760318 ~ 5789161 (-) |
| CI01000001_05848734_05855468 | NA | coding | upstream | 230589 | 5848633 ~ 5855805 (-) |
| G16538 | NA | non-coding | downstream | 1827 | 5615659 ~ 5615930 (-) |
| G16537 | NA | non-coding | downstream | 15152 | 5602316 ~ 5602605 (-) |
| G16536 | NA | non-coding | downstream | 19954 | 5597463 ~ 5597803 (-) |
| G16531 | NA | non-coding | downstream | 30403 | 5587079 ~ 5587354 (-) |
| G16524 | NA | non-coding | downstream | 44754 | 5572583 ~ 5573003 (-) |
| G16545 | NA | non-coding | upstream | 10742 | 5628786 ~ 5629078 (-) |
| G16547 | NA | non-coding | upstream | 11699 | 5629743 ~ 5629997 (-) |
| G16549 | NA | non-coding | upstream | 28910 | 5646954 ~ 5647294 (-) |
| G16552 | NA | non-coding | upstream | 70755 | 5688799 ~ 5689464 (-) |
| G16553 | NA | non-coding | upstream | 71621 | 5689665 ~ 5690053 (-) |
| G16462 | NA | other | downstream | 388172 | 5222777 ~ 5229585 (-) |
| G16332 | NA | other | downstream | 659915 | 4950689 ~ 4957842 (-) |
| G15736 | NA | other | downstream | 816362 | 4800901 ~ 4801395 (-) |
| CI01000001_04726550_04727511 | PDPFB, PPDPFB, PPDPF | other | downstream | 889550 | 4725927 ~ 4728210 (-) |
| CI01000001_04468566_04523431 | DNMT3BB.1 | other | downstream | 1139612 | 4468209 ~ 4523431 (-) |
| G16664 | NA | other | upstream | 726060 | 6344104 ~ 6347955 (-) |
| G16753 | NA | other | upstream | 966436 | 6583054 ~ 6615589 (-) |
| G17789 | NA | other | upstream | 1219481 | 6837525 ~ 6890414 (-) |
| CI01000001_06932075_06937182 | NA | other | upstream | 1318033 | 6931621 ~ 6937231 (-) |
| G17911 | NA | other | upstream | 1633267 | 7251311 ~ 7267952 (-) |
