CI01000001_05594766_05595939 (OARD1)


Basic Information

Item Value
gene id CI01000001_05594766_05595939
gene name OARD1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 5594604 ~ 5595939 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_05594766_05595939.mRNA
ATACAGAGTTTATGGAAAATAAAACCCACAGGGAAGTCCCTGCTCGAATGCCAGTGATGGACAAGATGAAGGTCCCGTGCAGCACAGGATGGCGGCTGCTCCACATGAAAGGAGATTTGTTCACCTGTCCGCCCACCGATGCCCTGGCGCACTGCATCAGTGAAGACTGCCGCATGGGAGCAGGGATCGCTGTACTCTTCAAGAAGAAGTTTCGTGGAGTCGAGGAGCTTCAGGCTCAGAAGAAGCAACCTGGGCAATGTGCAGTCCTTAAAAGTTATGATCGGTTTGTGTATTACCTGGTCACAAAGAAAAAGTACAACCAAAAACCCACCTATGACAATCTCAAAAATAGCCTTGTGTCTATGAGGGAACACTGCTTGGCCAATGGCGTTAACAGTATATCCATGCCTCGGATTGGCTGTGGTCTGGATAAACTGAAATGGGGAAAGGTGTCTTCCATTATTACAGAAGTCTTCCAGGACACAAAAATCTCCATCACTGTGTACACAATCTAGACCACGGCAGGTCTGAAACATGTTATTTCTTAAATGATCTTAAAGAATGGTCAAAGGGTTGCTTTTTGTTCCAATGGAATTTCACAACGTACTGTATGGTGGGTGTTTATTAGTCTTGTTCTGAGAAATATAAGCACTAAAGCATGTAACAATAATAATAAA

Function

symbol description
oard1 Predicted to be involved in peptidyl-glutamate ADP-deribosylation. Orthologous to human OARD1 (O-acyl-ADP-ribose deacylase 1).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_05594766_05595939.mRNA True 677 mRNA 0.44 5 5594604 5595939

Neighbor

gene id symbol gene type direction distance location
CI01000001_05575469_05577709 EBP coding downstream 16895 5574930 ~ 5577709 (-)
CI01000001_05544032_05558747 PARD6B coding downstream 35857 5543414 ~ 5558747 (-)
CI01000001_05509301_05539080 ARFGEF2 coding downstream 54046 5507976 ~ 5540558 (-)
CI01000001_05502863_05504638 BCL2L1 coding downstream 89552 5501270 ~ 5505052 (-)
CI01000001_05483661_05484398 NA coding downstream 109879 5483087 ~ 5484725 (-)
CI01000001_05599133_05600420 GUCA1B coding upstream 2838 5598777 ~ 5601740 (-)
CI01000001_05613623_05676716 KLHDC8B coding upstream 16879 5612818 ~ 5677447 (-)
CI01000001_05710029_05712242 NA coding upstream 113981 5709920 ~ 5712510 (-)
CI01000001_05738554_05751605 NA coding upstream 142188 5738127 ~ 5751605 (-)
CI01000001_05753118_05757768 ASB14B coding upstream 157092 5753031 ~ 5758402 (-)
G16531 NA non-coding downstream 7250 5587079 ~ 5587354 (-)
G16524 NA non-coding downstream 21601 5572583 ~ 5573003 (-)
G16518 NA non-coding downstream 126140 5468118 ~ 5468464 (-)
G16515 NA non-coding downstream 132333 5462006 ~ 5462271 (-)
G16514 NA non-coding downstream 134586 5459792 ~ 5460018 (-)
G16536 NA non-coding upstream 1524 5597463 ~ 5597803 (-)
G16537 NA non-coding upstream 6377 5602316 ~ 5602605 (-)
G16538 NA non-coding upstream 19720 5615659 ~ 5615930 (-)
G16539 NA non-coding upstream 21818 5617757 ~ 5618044 (-)
G16545 NA non-coding upstream 32847 5628786 ~ 5629078 (-)
G16462 NA other downstream 365019 5222777 ~ 5229585 (-)
G16332 NA other downstream 636762 4950689 ~ 4957842 (-)
G15736 NA other downstream 793209 4800901 ~ 4801395 (-)
CI01000001_04726550_04727511 PDPFB, PPDPFB, PPDPF other downstream 866397 4725927 ~ 4728210 (-)
CI01000001_04468566_04523431 DNMT3BB.1 other downstream 1116459 4468209 ~ 4523431 (-)
G16664 NA other upstream 748165 6344104 ~ 6347955 (-)
G16753 NA other upstream 988541 6583054 ~ 6615589 (-)
G17789 NA other upstream 1241586 6837525 ~ 6890414 (-)
CI01000001_06932075_06937182 NA other upstream 1340138 6931621 ~ 6937231 (-)
G17911 NA other upstream 1655372 7251311 ~ 7267952 (-)

Expression


Co-expression Network