Gene
RNA
| Item | Value |
|---|---|
| gene id | G16538 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 5615659 ~ 5615930 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU18522 | True | 272 | lncRNA | 0.44 | 1 | 5615659 | 5615930 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000001_05599133_05600420 | GUCA1B | coding | downstream | 13919 | 5598777 ~ 5601740 (-) |
| CI01000001_05594766_05595939 | OARD1 | coding | downstream | 19720 | 5594604 ~ 5595939 (-) |
| CI01000001_05575469_05577709 | EBP | coding | downstream | 37950 | 5574930 ~ 5577709 (-) |
| CI01000001_05544032_05558747 | PARD6B | coding | downstream | 56912 | 5543414 ~ 5558747 (-) |
| CI01000001_05509301_05539080 | ARFGEF2 | coding | downstream | 75101 | 5507976 ~ 5540558 (-) |
| CI01000001_05710029_05712242 | NA | coding | upstream | 93990 | 5709920 ~ 5712510 (-) |
| CI01000001_05738554_05751605 | NA | coding | upstream | 122197 | 5738127 ~ 5751605 (-) |
| CI01000001_05753118_05757768 | ASB14B | coding | upstream | 137101 | 5753031 ~ 5758402 (-) |
| CI01000001_05760403_05789161 | DNAH12 | coding | upstream | 144388 | 5760318 ~ 5789161 (-) |
| CI01000001_05848734_05855468 | NA | coding | upstream | 232703 | 5848633 ~ 5855805 (-) |
| G16537 | NA | non-coding | downstream | 13054 | 5602316 ~ 5602605 (-) |
| G16536 | NA | non-coding | downstream | 17856 | 5597463 ~ 5597803 (-) |
| G16531 | NA | non-coding | downstream | 28305 | 5587079 ~ 5587354 (-) |
| G16524 | NA | non-coding | downstream | 42656 | 5572583 ~ 5573003 (-) |
| G16518 | NA | non-coding | downstream | 147195 | 5468118 ~ 5468464 (-) |
| G16539 | NA | non-coding | upstream | 1827 | 5617757 ~ 5618044 (-) |
| G16545 | NA | non-coding | upstream | 12856 | 5628786 ~ 5629078 (-) |
| G16547 | NA | non-coding | upstream | 13813 | 5629743 ~ 5629997 (-) |
| G16549 | NA | non-coding | upstream | 31024 | 5646954 ~ 5647294 (-) |
| G16552 | NA | non-coding | upstream | 72869 | 5688799 ~ 5689464 (-) |
| G16462 | NA | other | downstream | 386074 | 5222777 ~ 5229585 (-) |
| G16332 | NA | other | downstream | 657817 | 4950689 ~ 4957842 (-) |
| G15736 | NA | other | downstream | 814264 | 4800901 ~ 4801395 (-) |
| CI01000001_04726550_04727511 | PDPFB, PPDPFB, PPDPF | other | downstream | 887452 | 4725927 ~ 4728210 (-) |
| CI01000001_04468566_04523431 | DNMT3BB.1 | other | downstream | 1137514 | 4468209 ~ 4523431 (-) |
| G16664 | NA | other | upstream | 728174 | 6344104 ~ 6347955 (-) |
| G16753 | NA | other | upstream | 968550 | 6583054 ~ 6615589 (-) |
| G17789 | NA | other | upstream | 1221595 | 6837525 ~ 6890414 (-) |
| CI01000001_06932075_06937182 | NA | other | upstream | 1320147 | 6931621 ~ 6937231 (-) |
| G17911 | NA | other | upstream | 1635381 | 7251311 ~ 7267952 (-) |
