CI01000001_05599133_05600420 (GUCA1B)


Basic Information

Item Value
gene id CI01000001_05599133_05600420
gene name GUCA1B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 5598777 ~ 5601740 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_05599133_05600420.mRNA
AGGGAACCCCTCCACATCCAGACTCTCAGCCAAACAAGGGACCCCCCAATGTAAAAATGCTAGATTTCCTAACATTTTAGTGACATAACTTTGATTAATAGCTTTAGTAAACATTACTGCCTTCTGTAATACTTAACATATCATTAATGTACCACATTTATTATTTGAAATATATAGAATTTTTTTTAAACCCGTTGCAAGACCTTCATGGACACCCAGAGCTGGGACCCATATGTCTAAATGCATTTTCACTTATTCCATTTTCAGTGATGAAAGTGAATAATTTTTCTGTAGTATTTTGTGGCCTTAAAGGGGTAGTCCACCCAAAAATGAAAATTACGTCATTAATTACTCGCCCTAATGTTGTTCCACACCCGTAAGACCTTTGTTCATCTTCGGAACACAAATTAAGATATTTTTGATGAAATCCGATGGCTCAGTAAGGCCTGCATCGTCAGCAATAACACTCCCTTTTTCAATGCCCAGAAAGCTACTAAAAACATACTTAAAACAGTTCATGTGACTACAGTGGTTCAACCTTAATATTATAAAGCGACTAGAATACTTTTTGTGCACCAAAAAATTTAAAATAGTGACTTTATTCAACAATATCTAGTGATGGGTGATTTCAAAACACTGCTTCATGAAGCTTCGAAGCTTTACGAATCATTTGTTTCGAATCAGTGGTTCGGAGCACGTATCAAACTGCCAAAGTCACGTGAACTATTGAAGTTTCAAAACACTTATGACGTAAGGAAGCCTCGTTTACTGAAATCATGGGATTTTGGTGCTCTGAACAATTGATGGTGAACTAACCCTTTAAACCTAAATGATTTTAATTTGAACAGGTAAAAATAGTCAGATCATGTTTAATGTTCTGACATGAGACCCTCAGGGAGCCCTTGAACCTGAACTGGAACGCTCTGTGTACTAAATGTTGAATTATAGCAAAGCTCTTGATCTTGTTTCAAGCTAATTGATTCAGACATGGATTGATATGAATAATCTCTTGTAGTCATGTGATCCAAAATAGCCCTTGTGCTGAATCCCAAGCCAGTAGAGCACCTTTGCTGAAAGGTTGAGGTTACTTTTACACTTTGGTAAATATTGAAAATTTTAACTTCAGGTTTTTCTGATATTTTTAAAGATTTGTATCCTAAATCAGACATTTTCAGTGTTGTATCATCATTTTGTGGGACTTAAAGGGTTATTGGGATGTCTGGATCAGGGAGAACTCCAGGAAAGTGAAGCTGCCAGATGTGATCATGGACATTTTTTGTTGAGAAGCAGAGCTTGTGTTTTTTATTGCCATCTTTCGTGATGGGTCAGCGACTCAGTGAGGATTCTGACGAAAAAGAAATTGATGTTGCAGAACTGCAGGAGTGGTATAAAAAGTTTGTGGTGGAATGTCCGAGCGGAACCCTCTTCATGCACGAGTTCAAGAGCTTCTTCGGGGTAACGGAAAACCCGGAAGCGGCAGATTACATAGAAAACATGTTCCGTGCTTTTGATAAAAATGGGGACAACACTATTGATTTTCTGGAATATGTTGCAGCCTTGAATCTAGTGCTGCGAGGAAAGTTGGAGCACAAACTGAAATGGACTTTTAAAATGTATGACAAGGATGGGAGTGGCTGCATCGACAAAACAGAGCTCAAGGAGATTGTGGAGTCAATCTACCGACTAAAGAAAGCCTGCCATGGTGAACTTGATGAAGAGTGTAACCTACTGACCCCAGATCAGGTGGTGGACCGAATATTTGAGCTAGTGGATGAGAATGGAGATGGGGAGTTGTCCCTGGATGAGTTCATTGACGGGGCGCGACGTGACAAGTGGGTCATGAAGATGCTGCAAATGGACGTGAACCCTGGAGACTGGATCAATGAACAGAGACGGCGCAGCGCCAACTTCTGAACTCCATATTCACCAAAACAACCCTTAACATAAGCCTACCCCTTAACCAACATATACATGCATAGTTTCACAACTTCAGTTTTAGTCATGGTTCATGAAAGTGAATCTTGAGTCATCAGTACAAATTATATCACTTTTTTTTTACTTAGTAGTGTCTGTCTCCTGTTTTTTTTTCTTTTTTTGACAAACAGAATTCATTCTATCTACATGTATTTATATGTATTCATGTTTTCTTTATTGTTTCTTTCAATTTTGTTGCTAGGATCTGTGAACAGCTCACTTTAAATATTGATCTATTATTCTGCAGATGAGGTGCGTTTGTTTTACTCTATTTGGCATATTACTCAGTTAATAAA

Function

symbol description
guca1b Enables calcium ion binding activity and calcium sensitive guanylate cyclase activator activity. Predicted to act upstream of or within visual perception. Is expressed in retina. Human ortholog(s) of this gene implicated in retinitis pigmentosa 48. Orthologous to human GUCA1B (guanylate cyclase activator 1B).

NR:

description
guanylate cyclase-activating protein 2

GO:

id name namespace
GO:0031284 positive regulation of guanylate cyclase activity biological_process

KEGG:

id description
K08328 GUCA1; guanylate cyclase activator 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_05599133_05600420.mRNA True 2270 mRNA 0.38 4 5598777 5601740

Neighbor

gene id symbol gene type direction distance location
CI01000001_05594766_05595939 OARD1 coding downstream 2838 5594604 ~ 5595939 (-)
CI01000001_05575469_05577709 EBP coding downstream 21068 5574930 ~ 5577709 (-)
CI01000001_05544032_05558747 PARD6B coding downstream 40030 5543414 ~ 5558747 (-)
CI01000001_05509301_05539080 ARFGEF2 coding downstream 58219 5507976 ~ 5540558 (-)
CI01000001_05502863_05504638 BCL2L1 coding downstream 93725 5501270 ~ 5505052 (-)
CI01000001_05613623_05676716 KLHDC8B coding upstream 11078 5612818 ~ 5677447 (-)
CI01000001_05710029_05712242 NA coding upstream 108180 5709920 ~ 5712510 (-)
CI01000001_05738554_05751605 NA coding upstream 136387 5738127 ~ 5751605 (-)
CI01000001_05753118_05757768 ASB14B coding upstream 151291 5753031 ~ 5758402 (-)
CI01000001_05760403_05789161 DNAH12 coding upstream 158578 5760318 ~ 5789161 (-)
G16536 NA non-coding downstream 974 5597463 ~ 5597803 (-)
G16531 NA non-coding downstream 11423 5587079 ~ 5587354 (-)
G16524 NA non-coding downstream 25774 5572583 ~ 5573003 (-)
G16518 NA non-coding downstream 130313 5468118 ~ 5468464 (-)
G16515 NA non-coding downstream 136506 5462006 ~ 5462271 (-)
G16537 NA non-coding upstream 576 5602316 ~ 5602605 (-)
G16538 NA non-coding upstream 13919 5615659 ~ 5615930 (-)
G16539 NA non-coding upstream 16017 5617757 ~ 5618044 (-)
G16545 NA non-coding upstream 27046 5628786 ~ 5629078 (-)
G16547 NA non-coding upstream 28003 5629743 ~ 5629997 (-)
G16462 NA other downstream 369192 5222777 ~ 5229585 (-)
G16332 NA other downstream 640935 4950689 ~ 4957842 (-)
G15736 NA other downstream 797382 4800901 ~ 4801395 (-)
CI01000001_04726550_04727511 PDPFB, PPDPFB, PPDPF other downstream 870570 4725927 ~ 4728210 (-)
CI01000001_04468566_04523431 DNMT3BB.1 other downstream 1120632 4468209 ~ 4523431 (-)
G16664 NA other upstream 742364 6344104 ~ 6347955 (-)
G16753 NA other upstream 982740 6583054 ~ 6615589 (-)
G17789 NA other upstream 1235785 6837525 ~ 6890414 (-)
CI01000001_06932075_06937182 NA other upstream 1334337 6931621 ~ 6937231 (-)
G17911 NA other upstream 1649571 7251311 ~ 7267952 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_022281 guca1b coding NC_007134.7 CM002907.2 19227296 ~ 19230627 (-)