CI01000001_05483661_05484398


Basic Information

Item Value
gene id CI01000001_05483661_05484398
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 5483087 ~ 5484725 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_05483661_05484398.mRNA
ACATTCTTCTTCCCATATTTTCAAGCTTGTGTAGATAACTAGGGCAAAGGGAAAGATTGGAGGATGACATCAGTCTTCTTGAGTGGAAAACAGGGGTGGGCGTCTGAGGGTTGTTTGTGTGTGTGTGTGTGTTTTGTAATCGACTGCATGCACTGAATATTTTCGGCTGGATCACTGCATTGCTGTAATACCTCTGACAAAAATATGATGCCAGTGAAACTAATCGTATTGACCCTGAATCTGCACTGAAGATCCTACTGAGAAAAGTACAGGGGGGAAAAAAAAACATTTCTGTCTTCACAGAAATTGTCAGGGTGGTAGGAACTCATGCATGTTTATGAGTCATATTTGCTTTTTACTGCAGCGTTCTGGTTGAGTTATTGCAGCCTCCGTCTGCAGTTGGAGCGATTCGCAGAGATCTTTGGAAAAGATGCAGCGGCAGAGAGCAGAAAATCACAAGAAAACTTCAAGAAGTGGTTGCTGGCGGGAATGACCTTGCTCACGGGTGTCGTGGTTGGATCACTCATTGCACAGAAACGCCTGTGAGGATCAGAAAAACTGAAGATCCAAACACCTACTGCTTCATTTAGACATCCAGCTACCATGAAGGAACTTCAAAAATACTTGTTTTGGATTTATTTGTTTCCCTTTTATTGCCAAGAAATTCCATGTTTACATCCCACGTCCCGTTGTGTACTGTTGACTGAGTGGAGCGCATCTGTGATGTTATGTCACGTGACCCAGACTGCATGAGGGTGGTTTGGTTTTAGCTAACTCAGACAATGCAAAGCCACGTCTCCTTACACCGTTTAAGGAAATGAGAAAAATGACTAAAACAGTCGAAGAAAAAAGTTTAAAATCTTTGTTCTCTATGTCTGTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAGCTCTATCATAAATCTTTTTAAGTATCCTATTATTCTCTCATTTTCAAAGAGACTGGCAAAACTGACAAGGATACAAACATTTTATCTTTAAATCTAATTTAAGCTCATGTGTCATTTTTGAGTTGACCGAATGATAGAGAAGTTTAATCTGAACTGAATTTGAAGTATTCAGTCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_05483661_05484398.mRNA True 1120 mRNA 0.38 2 5483087 5484725

Neighbor

gene id symbol gene type direction distance location
CI01000001_05437862_05438101 NA coding downstream 44986 5437703 ~ 5438101 (-)
CI01000001_05436238_05437581 FAM110A coding downstream 45432 5435805 ~ 5437655 (-)
CI01000001_05403970_05409286 NSFL1C coding downstream 73801 5403970 ~ 5409286 (-)
CI01000001_05387081_05398706 TRPC4AP coding downstream 84381 5386427 ~ 5398706 (-)
CI01000001_05355269_05356224 NA coding downstream 125372 5354711 ~ 5357715 (-)
CI01000001_05502863_05504638 BCL2L1 coding upstream 16545 5501270 ~ 5505052 (-)
CI01000001_05509301_05539080 ARFGEF2 coding upstream 23251 5507976 ~ 5540558 (-)
CI01000001_05544032_05558747 PARD6B coding upstream 58689 5543414 ~ 5558747 (-)
CI01000001_05575469_05577709 EBP coding upstream 90205 5574930 ~ 5577709 (-)
CI01000001_05594766_05595939 OARD1 coding upstream 109879 5594604 ~ 5595939 (-)
G16518 NA non-coding downstream 14623 5468118 ~ 5468464 (-)
G16515 NA non-coding downstream 20816 5462006 ~ 5462271 (-)
G16514 NA non-coding downstream 23069 5459792 ~ 5460018 (-)
G16512 NA non-coding downstream 63691 5418941 ~ 5419396 (-)
G16509 NA non-coding downstream 68592 5414250 ~ 5414495 (-)
G16524 NA non-coding upstream 87858 5572583 ~ 5573003 (-)
G16531 NA non-coding upstream 102354 5587079 ~ 5587354 (-)
G16536 NA non-coding upstream 112738 5597463 ~ 5597803 (-)
G16537 NA non-coding upstream 117591 5602316 ~ 5602605 (-)
G16538 NA non-coding upstream 130934 5615659 ~ 5615930 (-)
G16462 NA other downstream 253502 5222777 ~ 5229585 (-)
G16332 NA other downstream 525245 4950689 ~ 4957842 (-)
G15736 NA other downstream 681692 4800901 ~ 4801395 (-)
CI01000001_04726550_04727511 PDPFB, PPDPFB, PPDPF other downstream 754880 4725927 ~ 4728210 (-)
CI01000001_04468566_04523431 DNMT3BB.1 other downstream 1004942 4468209 ~ 4523431 (-)
G16664 NA other upstream 859379 6344104 ~ 6347955 (-)
G16753 NA other upstream 1099755 6583054 ~ 6615589 (-)
G17789 NA other upstream 1352800 6837525 ~ 6890414 (-)
CI01000001_06932075_06937182 NA other upstream 1451352 6931621 ~ 6937231 (-)
G17911 NA other upstream 1766586 7251311 ~ 7267952 (-)

Expression


Co-expression Network