CI01000001_05437862_05438101


Basic Information

Item Value
gene id CI01000001_05437862_05438101
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 5437703 ~ 5438101 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_05437862_05438101.mRNA
GAAAAGAGTGCAGGATTTCAAGAAAAAGAGTTTCAGGTTTTCAAGGAGTGTTTTACAAGTCTGAGACATCTGGAGATTGAAAGGAAAGGACTGAGCCACCGTTTCACCAGAACTATTCTGATAACATTTCAGCTGCGAAGAGCTCACTTCAGGATCTGCCCCGTCCTGGTGGGTCACTCAGCCGGACTGATGTGGAATGCGACCCTTTATGACCCCATCCCATGGGCCTCTATTCAATGAGCCGGACTCGGGAGAGAGCAGATAATAGAGGCAAGAGGCCGGCACACAAAAAAGAGTGAAATAATAACAGCAGCAGGAGTGTTCAGACTGGTAAGAGAGTTAAAGGGGTCCTTGAAGGTGGGGAAAAAAGAGCTTAAAATACAAAGGAGAAGGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_05437862_05438101.mRNA True 399 mRNA 0.46 1 5437703 5438101

Neighbor

gene id symbol gene type direction distance location
CI01000001_05436238_05437581 FAM110A coding downstream 48 5435805 ~ 5437655 (-)
CI01000001_05403970_05409286 NSFL1C coding downstream 28417 5403970 ~ 5409286 (-)
CI01000001_05387081_05398706 TRPC4AP coding downstream 38997 5386427 ~ 5398706 (-)
CI01000001_05355269_05356224 NA coding downstream 79988 5354711 ~ 5357715 (-)
CI01000001_05318747_05341451 ARHGAP4B coding downstream 95930 5317514 ~ 5341773 (-)
CI01000001_05483661_05484398 NA coding upstream 44986 5483087 ~ 5484725 (-)
CI01000001_05502863_05504638 BCL2L1 coding upstream 63169 5501270 ~ 5505052 (-)
CI01000001_05509301_05539080 ARFGEF2 coding upstream 69875 5507976 ~ 5540558 (-)
CI01000001_05544032_05558747 PARD6B coding upstream 105313 5543414 ~ 5558747 (-)
CI01000001_05575469_05577709 EBP coding upstream 136829 5574930 ~ 5577709 (-)
G16512 NA non-coding downstream 18307 5418941 ~ 5419396 (-)
G16509 NA non-coding downstream 23208 5414250 ~ 5414495 (-)
G16497 NA non-coding downstream 86788 5350668 ~ 5350915 (-)
G16461 NA non-coding downstream 186197 5232386 ~ 5251506 (-)
G16459 NA non-coding downstream 248061 5189281 ~ 5189642 (-)
G16514 NA non-coding upstream 21691 5459792 ~ 5460018 (-)
G16515 NA non-coding upstream 23905 5462006 ~ 5462271 (-)
G16518 NA non-coding upstream 30017 5468118 ~ 5468464 (-)
G16524 NA non-coding upstream 134482 5572583 ~ 5573003 (-)
G16531 NA non-coding upstream 148978 5587079 ~ 5587354 (-)
G16462 NA other downstream 208118 5222777 ~ 5229585 (-)
G16332 NA other downstream 479861 4950689 ~ 4957842 (-)
G15736 NA other downstream 636308 4800901 ~ 4801395 (-)
CI01000001_04726550_04727511 PDPFB, PPDPFB, PPDPF other downstream 709496 4725927 ~ 4728210 (-)
CI01000001_04468566_04523431 DNMT3BB.1 other downstream 959558 4468209 ~ 4523431 (-)
G16664 NA other upstream 906003 6344104 ~ 6347955 (-)
G16753 NA other upstream 1146379 6583054 ~ 6615589 (-)
G17789 NA other upstream 1399424 6837525 ~ 6890414 (-)
CI01000001_06932075_06937182 NA other upstream 1497976 6931621 ~ 6937231 (-)
G17911 NA other upstream 1813210 7251311 ~ 7267952 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_022272 NA non-coding NC_007134.7 CM002907.2 18869217 ~ 18898522 (-)