Gene
RNA
| Item | Value |
|---|---|
| gene id | G18624 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 9055783 ~ 9056186 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: LOW QUALITY PROTEIN: collagenase 3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU20907 | True | 404 | lncRNA | 0.37 | 1 | 9055783 | 9056186 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000001_09032204_09038149 | IDH3G | coding | downstream | 17634 | 9032204 ~ 9038149 (-) |
| CI01000001_08990605_08998643 | AVPR2AA | coding | downstream | 56249 | 8990590 ~ 8999534 (-) |
| CI01000001_08942877_08948672 | NA | coding | downstream | 107111 | 8942780 ~ 8948672 (-) |
| CI01000001_08904658_08904945 | NA | coding | downstream | 150545 | 8904644 ~ 8905238 (-) |
| CI01000001_08851970_08866723 | SYT6A, SYT6 | coding | downstream | 188938 | 8851868 ~ 8866845 (-) |
| CI01000001_09213449_09223894 | LRP1AB, LRP1 | coding | upstream | 157245 | 9213431 ~ 9224350 (-) |
| CI01000001_09228393_09265951 | LRP1AB, LRP1 | coding | upstream | 172180 | 9228366 ~ 9266098 (-) |
| CI01000001_09270954_09281725 | NA | coding | upstream | 213516 | 9269702 ~ 9282511 (-) |
| CI01000001_09322428_09325859 | NA | coding | upstream | 265944 | 9322130 ~ 9325977 (-) |
| CI01000001_09356265_09365557 | SENP1 | coding | upstream | 298981 | 9355167 ~ 9366268 (-) |
| G18594 | NA | non-coding | downstream | 26880 | 9028684 ~ 9028903 (-) |
| G18572 | NA | non-coding | downstream | 27264 | 9028164 ~ 9028519 (-) |
| G18588 | NA | non-coding | downstream | 86047 | 8968549 ~ 8969736 (-) |
| G18581 | NA | non-coding | downstream | 101836 | 8952362 ~ 8953947 (-) |
| G18563 | NA | non-coding | downstream | 271430 | 8784128 ~ 8784353 (-) |
| G18625 | NA | non-coding | upstream | 657 | 9056843 ~ 9057050 (-) |
| G18626 | NA | non-coding | upstream | 4269 | 9060455 ~ 9060679 (-) |
| G18627 | NA | non-coding | upstream | 5435 | 9061621 ~ 9061966 (-) |
| G18628 | NA | non-coding | upstream | 7842 | 9064028 ~ 9064509 (-) |
| G18629 | NA | non-coding | upstream | 9719 | 9065905 ~ 9066141 (-) |
| G18223 | NA | other | downstream | 1127266 | 7926104 ~ 7928517 (-) |
| G18023 | NA | other | downstream | 1298263 | 7756501 ~ 7757520 (-) |
| G17911 | NA | other | downstream | 1802529 | 7251311 ~ 7267952 (-) |
| CI01000001_06932075_06937182 | NA | other | downstream | 2118560 | 6931621 ~ 6937231 (-) |
| G17789 | NA | other | downstream | 2165369 | 6837525 ~ 6890414 (-) |
| CI01000001_09804494_09811219 | NA | other | upstream | 753471 | 9804429 ~ 9811219 (-) |
| G20136 | NA | other | upstream | 1482841 | 10539027 ~ 10539850 (-) |
| CI01000001_10862471_10864514 | NA | other | upstream | 1806039 | 10862225 ~ 10865770 (-) |
| G20230 | NA | other | upstream | 1965941 | 11022127 ~ 11028777 (-) |
| G20319 | NA | other | upstream | 2054651 | 11110837 ~ 11114747 (-) |
