LOC122338121


Basic Information

Item Value
gene id LOC122338121
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 14664842 ~ 14667052 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006249714.1
GTTCTCTTTCGGCCCCACCCACAGTGTGTCGTCACTTCCGCGGAAACCGCTCTTCCGTCTTTCTCGCGCACGTGTAGTCCTCTTTACGACTCGGCTGGCGAAGATGGCGGACACACAGGTGTTGACCAAGATGAAGATGCAGAGGGCCATCGTCAGATCAGATTACATCTGCAAGTACAACCGCTATGAGACGAAGACTTGTCTGTCCACCTCTCTCCGTGCTTTAGGCTATTGCTGGCACTTACATTGATAAGAAATGCCCCTTCACCGGAAACGTGTCCATCAGAGGCCGTATTCTGTCTGGTGTGGTGACCAAGATGAAGATGCGGAGGACCATCATTAGACAGGACTACTTGCATTACATCTGCAAGTACAACCGCTATGAGACATAAGAACTTGTCTGTCCACCTCTCCCCATGCTTCAGGTGTGGTGACCAAGATGAAGATGCGGAGGACCATCATTAGACAGGACTACTTGCATTACATCCGCAAGTACAACCGCTATGAGACATAAGAACTTGTCAGTCCACCTCTCCCCATGCTTCAGGAGTGTGACTGTTGTTGGCGTGTCCTGAAGGTCACCAAGGCAGCTGGAGCCAAGCACTTCCAGAAGATCTAGATCGGTTTTAACAATGACACCTGTATTGTTTGtggaaaagaaaattaaagttttttttttaatgtttca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006249714.1 True 688 lncRNA 0.48 6 14664842 14667052

Neighbor

gene id symbol gene type direction distance location
map3k14a LOC107654524,LOC107721479,LOC107601304,LOC107674595,LOC107590367 coding upstream 7366 14642965 ~ 14657476 (+)
gosr2 gosr2,LOC107654523,LOC107721531,LOC107674598 coding upstream 56118 14603174 ~ 14608724 (+)
wnt9b wnt9b,LOC107721476,LOC107601233,LOC107720014,LOC107590369,LOC107674619,LOC107654519 coding upstream 72260 14584130 ~ 14592582 (+)
fmnl1a LOC107721528,LOC107601298,LOC107654518,LOC107688135,LOC107720013 coding upstream 209599 14440829 ~ 14455243 (+)
LOC122341307 NA coding upstream 231250 14420262 ~ 14433592 (+)
rps11 rps11,LOC107674708,LOC107590366 coding downstream 2429 14669481 ~ 14671559 (+)
LOC122342191 NA coding downstream 3544 14670596 ~ 14670680 (+)
hrob LOC107721529,LOC107654526,LOC107601306,LOC107720097 coding downstream 5265 14672317 ~ 14678865 (+)
asic2 asic2,LOC107654528,LOC107674665,LOC107720021,LOC108411330,LOC107592342 coding downstream 17594 14684646 ~ 14957726 (+)
kcnj19a si:dkey-106c17.3,LOC107654469,LOC107581800,LOC107737881,LOC107674737,LOC107720030,LOC108432058 coding downstream 362771 15029823 ~ 15050437 (+)
G20168 NA non-coding upstream 35526 14626792 ~ 14629316 (+)
G20166 NA non-coding upstream 46008 14617262 ~ 14618834 (+)
G20146 NA non-coding upstream 206936 14379624 ~ 14457906 (+)
G20113 ramp2,LOC107721488,LOC107601292,LOC107654510,LOC107590449 non-coding upstream 359949 14303150 ~ 14304893 (+)
G20057 NA non-coding upstream 513884 14148464 ~ 14150958 (+)
G20180 NA non-coding downstream 253193 14920245 ~ 14969285 (+)
G20183 NA non-coding downstream 303960 14971012 ~ 14971661 (+)
G20179 NA non-coding downstream 305247 14972299 ~ 14989992 (+)
G20188 NA non-coding downstream 323177 14990229 ~ 14993037 (+)
G20269 NA non-coding downstream 462629 15129681 ~ 15138900 (+)
G20167 NA other upstream 41984 14618994 ~ 14622858 (+)
G20148 LOC107721478,LOC107654521,LOC107674594 other upstream 49434 14535179 ~ 14615408 (+)
abcc1 abcc1,LOC107721490,LOC107654509,LOC107720005,LOC107688147,LOC107601224,LOC107590430 other upstream 391533 14255490 ~ 14273309 (+)
smim22 si:ch1073-443f11.2,smim22,LOC107688153,LOC107721520,LOC107601279 other upstream 541714 14120185 ~ 14123128 (+)
G20015 cog1,LOC107721521,LOC107601277,LOC107654497,LOC107590385,LOC107688115,LOC107719994 other upstream 545272 14118467 ~ 14119570 (+)
G20286 LOC107581737,LOC107654534 other downstream 482060 15149112 ~ 15184873 (+)
G20295 plcd3,plcd3a,LOC107674588,LOC107581738,LOC107654535,LOC107591554,LOC108432051 other downstream 501286 15168338 ~ 15169258 (+)
zgc:165423 LOC107738133,LOC107654537,LOC107581795 other downstream 602748 15269800 ~ 15280113 (+)
fscn1a fscn1a,LOC107703419,LOC107742378,LOC107581720,LOC107674660,LOC107720060 other downstream 1039884 15706936 ~ 15744194 (+)
gna12a gna12,gna12a,LOC107703403,LOC107753491,LOC107674729,LOC107758336 other downstream 1512568 16179620 ~ 16207846 (+)

Expression


Co-expression Network