G20113 (ramp2,LOC107721488,LOC107601292,LOC107654510,LOC107590449)


Basic Information

Item Value
gene id G20113
gene name ramp2,LOC107721488,LOC107601292,LOC107654510,LOC107590449
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 14303150 ~ 14304893 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU29948
TCTAGGTAAAAGGTGtggtttaattatattaaaaacacatgtcCAATCAAAGTAGGAGGTGaagtataaaattataaaatagttcACAGGCTCTTAAAATGGTTGGtctataaaaaaagagaaaacgatCTGCAGGCATAGATGATACTATATTCAGACATGTGTAAGATTCATCCTTCATAAACGCTTACTGatgttattataaaacacaaagtaaTGCCAGTCTCGTTCATGTGACTACATTGATACAGTAATTATATTGTAATCATAGTACGCTGCAGTTCTTTGTGAGGGGcagagtaaaattaaaaatggacaATGTAAGTGGACATTGCAATCTCATCCCCTTTCCTCTTAAACGTTTACTTTTCAGAGACACCCGCATGTCATTAACttagataaataaacagatatttaaTAAGCTGCCTATTGAAATTGGTGGCTTTCATCCGGCTTTGTTTTGTCATGCATTCAGATTGATTTGTTTATGCTTAATTCCCCAATAGCTTtcataataaatttaaaaagtcaaacgTTATGACTTGTgtcaaaatagaaatgaaatcaCGAAGACATTATTCCCAGAGTCAGCTAAACAGCTCTTGTCACCTAACTAACATCAAAACCTACATTAAAACACGGGTTAAAGATTTCTTACAGTGCATAAAATGGACACTCAAATGAGTTTGTGGTTCTGCATCTGGTCATGTACACAATTTGTGTGAATACTTCAAACGAATCtctttacatttcacatttcattgGATTATGAATTTAAATCCAGAAGACAACGATGCCTATATGTGCACTTTGGAGATAATAATGCTGGTTGTGAAATATCTGTCATGCGCAGTAGCTGTATGTTCATGATAAATTTGCATTTCTAGACAACAAATGTTCCACTAAATTACAGTAACATTTTCCAGTCAGAGGTCACCCCCAGAACAAATGCACATCCTCCATCCTGGTTTAGTCAGTCCTGGAGACGCCCAGGTGCGCAATGACTGTGGAGCGTTGAGCCAGGACATTATCCCTGGGTGGGATACTGGATGAAGAAAAAATAGAGGAGAAGAATGACTAAGTAACATCTTCTTGCACCTGGACGCCTATGACCTCCTGTCTCCATTCTTAGTCTTGAGAACAACTAGGACCACCATAACGGGGATTAGGCATATGGGGGTCATCACAAGGGCAAGGATGATGCTGGGAGGGGGGTCTCGCAGTGCCTCTGTGGGGCAATCGTGAAAATAGGTGGAGTGGATGTTCACAAACATCTGTTCAACCAACTGATTCGGCCAGGGAAGCAGCAGACATTCGGCAACAGTCTCAGTACACACAGTGAAGTTGTTGTATGCactttactttttccagtGAACACCAGTCAGTACTGTTCATGGAGTCCATAGCAGCAACAAAATTATACTGACACAACTGCACCAGCAGTCCGTAGCATTCTTGACTTATCAAGGAATAGTTCATACAAAATGAACAGTATGTGTCACAGATGCTCTTGTTACCACAGCCTaagatgtaaacaaaataaaaacaaataatgaatcatCATGTCCCGCATAATGCAGTTTTCTGTCACAGACAAGCTGTATATCTACAGTAATGATCTTAGTTCATTAACGTAAACTTTCTTACG

Function

symbol description
ramp2 Predicted to enable coreceptor activity. Predicted to be involved in several processes, including angiogenesis; protein localization to plasma membrane; and receptor internalization. Predicted to act upstream of or within intracellular protein transport and regulation of G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be active in cell surface. Human ortholog(s) of this gene implicated in hypertension. Orthologous to human RAMP2 (receptor activity modifying protein 2).

NR:

description
PREDICTED: receptor activity-modifying protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29948 True 1648 lncRNA 0.38 2 14303150 14304893

Neighbor

gene id symbol gene type direction distance location
nde1 nde1,LOC107654507,LOC107601288,LOC107688124 coding upstream 64035 14231891 ~ 14239115 (+)
gspt1l gspt1l,LOC107721494,LOC107590378,LOC107654506,LOC108438004,LOC108246886 coding upstream 73840 14222151 ~ 14229310 (+)
pdxdc1 LOC107719998,LOC107721496,LOC107654505 coding upstream 81340 14209727 ~ 14221810 (+)
si:dkeyp-72e1.9 si:dkeyp-72e1.9,LOC107721498,LOC107601283,LOC107688120,LOC107654504 coding upstream 107828 14157724 ~ 14195322 (+)
rgs9a rgs9,rgs9a,LOC107721500,LOC107590386,LOC107719993 coding upstream 191829 14102015 ~ 14111321 (+)
ezh1 ezh1,LOC107590376,LOC107720007,LOC107721487,LOC107688127,LOC107654511,LOC107601290 coding downstream 8135 14313028 ~ 14327730 (+)
LOC122341305 si:ch211-18i17.2,LOC107688129,LOC107720008,LOC107601293,LOC107721484,LOC107654513 coding downstream 64202 14369095 ~ 14397145 (+)
LOC122341695 LOC107688129,LOC107720008,LOC107601293,LOC107654513 coding downstream 92257 14397150 ~ 14401894 (+)
LOC122341307 NA coding downstream 115369 14420262 ~ 14433592 (+)
fmnl1a LOC107721528,LOC107601298,LOC107654518,LOC107688135,LOC107720013 coding downstream 135936 14440829 ~ 14455243 (+)
G20057 NA non-coding upstream 152192 14148464 ~ 14150958 (+)
G20009 NA non-coding upstream 201246 14100173 ~ 14101904 (+)
G19963 NA non-coding upstream 359659 13940616 ~ 13943491 (+)
LOC122342149 NA non-coding upstream 382881 13913926 ~ 13920269 (+)
G19891 NA non-coding upstream 484928 13815353 ~ 13818222 (+)
G20146 NA non-coding downstream 74731 14379624 ~ 14457906 (+)
G20166 NA non-coding downstream 312369 14617262 ~ 14618834 (+)
G20168 NA non-coding downstream 321899 14626792 ~ 14629316 (+)
LOC122338121 NA non-coding downstream 359949 14664842 ~ 14667052 (+)
LOC122342199 NA non-coding downstream 360593 14665486 ~ 14665570 (+)
abcc1 abcc1,LOC107721490,LOC107654509,LOC107720005,LOC107688147,LOC107601224,LOC107590430 other upstream 29841 14255490 ~ 14273309 (+)
smim22 si:ch1073-443f11.2,smim22,LOC107688153,LOC107721520,LOC107601279 other upstream 180022 14120185 ~ 14123128 (+)
G20015 cog1,LOC107721521,LOC107601277,LOC107654497,LOC107590385,LOC107688115,LOC107719994 other upstream 183580 14118467 ~ 14119570 (+)
G19973 NA other upstream 250118 14049490 ~ 14053032 (+)
slc16a3a si:ch211-234h8.7,slc16a3,LOC107720094,LOC107688105,LOC107590394 other upstream 300772 13995961 ~ 14002378 (+)
G20148 LOC107721478,LOC107654521,LOC107674594 other downstream 230286 14535179 ~ 14615408 (+)
G20167 NA other downstream 314101 14618994 ~ 14622858 (+)
G20172 rps11,LOC107674708 other downstream 360026 14664919 ~ 14671568 (+)
G20286 LOC107581737,LOC107654534 other downstream 844219 15149112 ~ 15184873 (+)
G20295 plcd3,plcd3a,LOC107674588,LOC107581738,LOC107654535,LOC107591554,LOC108432051 other downstream 863445 15168338 ~ 15169258 (+)

Expression


Co-expression Network