LOC122341695 (LOC107688129,LOC107720008,LOC107601293,LOC107654513)


Basic Information

Item Value
gene id LOC122341695
gene name LOC107688129,LOC107720008,LOC107601293,LOC107654513
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 14397150 ~ 14401894 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235239.1
GAGCAGCTCTTTCCCGCTGAAGTGGTGGAGGCCCGGGCCCTACTGGCCCCTGTCGATCCTCCTGGCTGCCCTTCGTTCCCCGGGGGTCTGCTGGCTGGGACGCTGTGGGGACACAagcggcgtcaggaacaggacCAAAGACTACGGGCCAGACTAAGGGAGGAGGGAGCTGTGGTGATGTCAGCCATTTTGGAGCGCTGGAAAGCCCTGGCGGCATACAGTCGCAGAGACAGCATGGCTGCCTATCTCACCATCGCCCGGCAGTGGTCAGGGTTTGGCTGCACGCTCTATGAAGTAGACTTTTACATTAGCTCGACAGGAAGCTTCTCTCAGAAGTTGTGGCTGGGCGTGGCAGCTtcctgtgtgtctctgtatcGTCAGGGTGAGGCTGAAGCACTGGAGTCTCTGCCAATTGGTCAGATCTGTTCCTATGGCGTCTCTGATAGCAACACATTCAGGATCACAGCAGGAGACCGAGATCTGCTCTTCGAGACCTCCAAGctgacTGAGATCATGCAGCTGATGAATGCTTACTTCAGTGCCACCCGTCGCCAGCTAGGCAAGGATGACTGCATCTCCATGGAGACAAACCCTAAGCTCCACCCCTCCCTACTTGAGCTCCCCTCTCACCCGGTGTGAAGAGCGAAGGActcgtgcacacacacacacacacacacacacacatacacacacacacggatacTGACTGATGCACACGTGCACATGCAGTCTTGACCGAATGCTTCCCTGTGAGGAGCTTTTGCGAAGAGAATGAACTCAGTTGAGACTGAAAGGAGCAGATGCTGTGGAAATGGAGGAGGAGTGGAAGGCGTCCAGGGAGCCACAAACAGCAGAGCAGGTTCAGGAACTCACTTGCTACACCGCCAGCCAAATCCAGAAAGGACACGGGGCCCTCAACCGGCCCTTGCCACCTGGAAGATCGCCAAATATCACAGAGAGCATAATAGcctgaaatcattttttaagcagtatttttgccttgttttttaaatgtttaaacatccttaaaacaacattaatttatttttatttgctttggaaATGTTAATTTTCCTTAAACTCGTCAAGTATTTAGACTAATTGTGCGACTAACTTTtcaagaaagtgtttttttttttcttattttgcatCTCATGTTAATTTACCTTGTTTAAAGGATGTTGCTTTTTTATtggaaaacatgacaaaaatatatatttttttttttttttgcttcgtgGTAATGTCTTTTGTATTTCACTGAAGGAAGTCAAGGCAAACACGCTGCCACTGCAGTCACACGCAAACACTCGCTCAGCTTTAAACGTTCCTTTCCAGACTCCTGGCTGGATCGCCATTAAACTCATTCATCAAACCGTACCTGACCTTGAAGTGACAGCAGGTGCGTGTCACTTTGACGTCGACCTTCAGAACTGTCCTATACTGAAGCGACAGATTTGAACATTTGAAGCTGTAGAAACCAAAGGATCCTTAGCTCGTCTGTATGATGTATTTGTGAAATGCTTTGAGCCCGACCTGGTGCTGCTTGACTGTGCTGTTAGCTTACAGTAACTCTGCACTGTGCTTCCTGTAGCCATAACAGCCTCCGATCTTCAGATCCGGTTAAAACCAACTAACTTGTGTGCAGCCTggacattttccaaaaatggaATTGGTTCAAACCAAGCTTCCCAGACCTTTTGAACATATTTTCAGACACTGAAGATAGACAAATAATCAACACTATTGATATGCATCATTGTCATCCCGTATTCTAAAGATGGTACATTTCCAtttaagggatagtttaccccaaaattaaaCCGTAGTCGTCATTTATTTGTCCTTCTTTCAtcttgttgaacacaaaagatatatttctgatattttcatatttcgaaagtaaacagtcaaaaacagcattactttatatatatatatatatatatatatatatatatatatatatataaaa

Function

NR:

description
PREDICTED: unconventional myosin-X-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235239.1 True 1975 mRNA 0.45 3 14397150 14401894

Neighbor

gene id symbol gene type direction distance location
LOC122341305 si:ch211-18i17.2,LOC107688129,LOC107720008,LOC107601293,LOC107721484,LOC107654513 coding upstream 5 14369095 ~ 14397145 (+)
ezh1 ezh1,LOC107590376,LOC107720007,LOC107721487,LOC107688127,LOC107654511,LOC107601290 coding upstream 69420 14313028 ~ 14327730 (+)
nde1 nde1,LOC107654507,LOC107601288,LOC107688124 coding upstream 158035 14231891 ~ 14239115 (+)
gspt1l gspt1l,LOC107721494,LOC107590378,LOC107654506,LOC108438004,LOC108246886 coding upstream 167840 14222151 ~ 14229310 (+)
pdxdc1 LOC107719998,LOC107721496,LOC107654505 coding upstream 175340 14209727 ~ 14221810 (+)
LOC122341307 NA coding downstream 18368 14420262 ~ 14433592 (+)
fmnl1a LOC107721528,LOC107601298,LOC107654518,LOC107688135,LOC107720013 coding downstream 38935 14440829 ~ 14455243 (+)
wnt9b wnt9b,LOC107721476,LOC107601233,LOC107720014,LOC107590369,LOC107674619,LOC107654519 coding downstream 182236 14584130 ~ 14592582 (+)
gosr2 gosr2,LOC107654523,LOC107721531,LOC107674598 coding downstream 201280 14603174 ~ 14608724 (+)
map3k14a LOC107654524,LOC107721479,LOC107601304,LOC107674595,LOC107590367 coding downstream 241071 14642965 ~ 14657476 (+)
G20113 ramp2,LOC107721488,LOC107601292,LOC107654510,LOC107590449 non-coding upstream 92257 14303150 ~ 14304893 (+)
G20057 NA non-coding upstream 246192 14148464 ~ 14150958 (+)
G20009 NA non-coding upstream 295246 14100173 ~ 14101904 (+)
G19963 NA non-coding upstream 453659 13940616 ~ 13943491 (+)
LOC122342149 NA non-coding upstream 476881 13913926 ~ 13920269 (+)
G20166 NA non-coding downstream 215368 14617262 ~ 14618834 (+)
G20168 NA non-coding downstream 224898 14626792 ~ 14629316 (+)
LOC122338121 NA non-coding downstream 262948 14664842 ~ 14667052 (+)
LOC122342199 NA non-coding downstream 263592 14665486 ~ 14665570 (+)
LOC122342189 NA non-coding downstream 263944 14665838 ~ 14665922 (+)
abcc1 abcc1,LOC107721490,LOC107654509,LOC107720005,LOC107688147,LOC107601224,LOC107590430 other upstream 123841 14255490 ~ 14273309 (+)
smim22 si:ch1073-443f11.2,smim22,LOC107688153,LOC107721520,LOC107601279 other upstream 274022 14120185 ~ 14123128 (+)
G20015 cog1,LOC107721521,LOC107601277,LOC107654497,LOC107590385,LOC107688115,LOC107719994 other upstream 277580 14118467 ~ 14119570 (+)
G19973 NA other upstream 344118 14049490 ~ 14053032 (+)
slc16a3a si:ch211-234h8.7,slc16a3,LOC107720094,LOC107688105,LOC107590394 other upstream 394772 13995961 ~ 14002378 (+)
G20148 LOC107721478,LOC107654521,LOC107674594 other downstream 133285 14535179 ~ 14615408 (+)
G20167 NA other downstream 217100 14618994 ~ 14622858 (+)
G20172 rps11,LOC107674708 other downstream 263025 14664919 ~ 14671568 (+)
G20286 LOC107581737,LOC107654534 other downstream 747218 15149112 ~ 15184873 (+)
G20295 plcd3,plcd3a,LOC107674588,LOC107581738,LOC107654535,LOC107591554,LOC108432051 other downstream 766444 15168338 ~ 15169258 (+)

Expression


Co-expression Network