LOC122329621


Basic Information

Item Value
gene id LOC122329621
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056722.1
NCBI id CM032091.1
chromosome length 21790128
location 5282175 ~ 5287162 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225970.1
ACACCACAGAATCAGAGTAACATCTTAAAGATGTCAGTCTTCAAACTGGAAGAACTTCAGCAGCACTGAACAGTCAATTTCCATTCATACCATTTCATACAAGACTGCTTCCTGATGCTCATTCAACGGCCAAGGTAATGCCAGTGTCATACGTGGGGCATTAGAGGCCTAATGGTTAGAGGGTCAGAATTTTAACCAAAAGGTCACAAGTTTAATTCCCAGCACCTGATGGAAATGTTGGTTGGGGGTGGGGCAAATAAACAGTGTCCCTTGATTTATTGAAAATGGTTTCTAGATTAATTCTGATTTATTTGTCAATTTAACCTGACTCAAATTTCAAGTGACTATTAGATATAAATCACAATAGTAGCCATAGAAGCTGGTCATACAGTTTGTTGTGTTTAATTtagataacatttttatttattttatttatttattatttaaaaaaacttttgctgGGGCCAGAGGTGACATGAAAGTCGGGGTAGAAAAGGCAAAAACCATATCAGGGGCACAACCAACATCTGTAGGACAGAATTTCCCCCAAATTTAAGATTTTTGGCCTGTTCTAGTGATATGGGTCAGAGATCAGATTTCCAACTGCACCAAGACTGTGAAAAAAATACCAAACAAGAAAGGGTTAAGTATCAGGCCCTAGagctgtttgttgtgttttctttccGCATGTGCTCTCTGATCTAGTTTCTGTCAGGTATatcttttataattaaacaatgaacaattGAATACAGTGTTTTACGATTACTTGTGTCCATTCTTCTATTGACATCcatttaaaaactgcagtgTTAGCATTAGCTGTTACGTTTTATTTTGGCTAGAGGTCGGAGGCTTGGCTTTCAGTGTCTTTAAACCTGCTTTACAGACTCTCAGACACATCTGTTTTACACAGAGATGATAGAGTCTCTTTTCTATTCATGACATTAATACTGCAGCTGAACCGCTCAGTTACCTAATTACCCACTTTCTATTTGTACTGTCAGTTTGCTTCTGATCCTTCATCTGGTGTTATTGAGAGACCCAGTTCATTCGAACCACAGAAATAAAGCCTGAGCCTGAGCTTGCTAAGGAGCTAGAGCTAGCAGATCACATCGATCCCACAATCCTGGCTAGTGTAAGTTTGTTCATATAATTGTCCATATGCAAAACTTTCTAATTGACTGAGAAATGGAGGCAACGCTTCCCAACCTGCCCACCCATGTGTTTGTTGTCACTGATTCCACTCAGCTCAGATTCATTGCCACTAGCAGTCCCATCCAGCACAAAGTGTTCTTCATCGCACCAGTAATGTCCATCAATGAGTCTTCTTTCTCACTCAGTCTTCCATTCCTGTTTGTTCAGCCTCTGCCATAAATCCCTGATGCACCTTGGGGCTTCCAGTCCCCAAGCTCTGCCTTGGTTTGAGGAATCCCAGGGTCTGCCTCGTCCGTTGTGCTTTCAGTTCCATCTCAATGCATCCACCAATTAGCTTCCTAATCACAGGACCATTGTCTTGTCTGTTCCTCTGGGCTCCCTCATCCCTCAGAACTCTTTGCATTGCATCACTCAGTCAAGATTACCCACAGGATGTCACtctcacaaataaaaacatagcgCCATCAACCGTGGTGAAGATAACTACAATCACATACCTACATAACTGCATAAAAAGATTTCTACGTTGCTGTGAAAATCCCAAATGCGATGGAAAGCCAAATGCTGACATGCCTGCGTTCAGAGCACCATCCAGAGAATGACAAGCCTGTTACTGATCCTGCATTAATTTGTTATTGCTAATTTGCCATGCTAATAAAATACAGCTACAACTACAACCAATTTTAAttgtctcagtactatggtatggtggaaatcctcacagatagATTATGTATTGTTATTCAAGTCTGTGCTAATGATAGCTGTCCCctactaagcaagccagaggcaacagtggcaaggaaccaaaaccccatctgtacagaatggagaaaaaaaccttctgagaaaccaggctcagttgggggccAGATCTTCTCTGACCAGACGACCAGcatttaattttcagttcaattttaaatgcagcaatGTCAGATTTTGTAAAGGACTTATTGTGTGTCAATgccatctcttggtgctgatccacaaCCTGATCTAAATGTAGAAAGAGGACTGGAATTGTTGGGAGAGACAGCAATGGAATTTTTTAACTAGTTAGTAAATAGCTAGTAAACAGGAGTTTAAGTATTAGGGGTCAACAGTCCAGAGTAATGGAGAgtgtggggaaaaaagtaaagaagTGAGTGCAGGCAGGTTGAAAATGGGTGGAGAAAAGTGTTGGGAGTTCTATGTGATAGGAAAATATCACAGGTTGAGCAGGATTAGGAACAAGTACATCAGAGGGACATCTCATGTTGGGCGTTTTTGGACATGGAGCTGCCAGGCAGGAGGCAAAGAGAAGGTATATGGATGTAGTGAATGAGGATATGAAGCTAGTGGGTGCAAGTATTGATGCTGACTTGCACCTCTGTACTGAGACACAGATGATACACTGAACATCTGTATTTGGTGTGTAAGAGCATCCGCAGAAagggacattaattaaatttgacATGAATGATAATCAGTAAAACTTAGATGTTGGAGACTCTCTTTCTCCTCGTGACATTACCACCACAGCTCAACTTTTTATGCGTATCAGTGAAATTACTTTTCAATAATTCTGTAGCTCTGGCCcctcttcagtgtttttattcctCTGTGTTTCAGTgacacaaatgtgtgtttgtttcattttaccatgaaattcatctttatttgttaccccggaccacaaaaccataaaaataatatttcgcaatatcactgcttttgctgtattttggatcaaataaatgcaggcttaaCTTCCTTTTTAAAACTGCGCTTTAGTATTTTGCAATTTAACTCATAAGataatgaaatttaaatcaCTAAATACTACTATCATTTacatcaaatattatataaataattctatttaataaacaacaactaTCATAAAAGCTAGTATCATAATTCAGTCAGAAGTATAACGTTTTTACAGAGGGCCGGAATTCATCTGAAAATGTAAGGTCAGCATAATCTTGTTCATCTTCAGGGCTTCCTCTGATTAATCAACCTTTGATGCAGAATCCTGTCGAGAGAGGATTCAACCAGATAGACATCACAGTTCTGGCGTGCTTCAGAGCGTTTTCAGGCATTTTAAGCCCGATTAAGAAAATGTCCCTCATATTAGCGTTGTTCTGTTTGTGGCGTCTGGTTGGTgagtttaaagtgtgtttttatggcTTCTGTCGTGGTATCATGTAATAAATTACTGGATAATTAGTCAGAGAGGAGTAATGTTTATCATCACTATTATTCTACTTTGAGATCACACTTAAATTCAACTCTTTGTTTGATAATTAGGGTTTGACTCAAATATAAAAGTTGTTGTTCAATTAAAACTGTGATCAGTGACAAAACTCTGCTCTTCAGGAGTATTTGCCGTTAAAGGACACACATCAGAGTCAGTGATAGAAGGAGAATCTGTCACCTTCAACTCTCCTTTTGCTCAAATAAAGCAGTTTGATTGGATTCTGTGGCAATTTGAGAAATGCTTGATAGTCGATACCAATGTAACGGCCAGCAGCATGACTGTGTATGACGATGTTCTTGATGGGAGATTCAGAGACCGAGTGAAGCTGGACAATCAAAGCGGATCTCTAACCATCACAAACATCACAACTGAACACGCTGGAGAGTACGTGGTGTCAACCAGCCAGCCGAGGATGATAACATTCGATCTCATTGTCTACGAAGCAGGGAAGTCGGTGTCGGTGACGGAGGGAGATTCGGTCGTTCTAGAATCTGGTGTTACTGAAATAAGTGAAAATGGCATACTGTGGGAGATCGAAAAAGAAAGGTCTTTAAAATCTGGGCTCATCGTCGCATATAAAGGTAATTTGAGGATATcgagagacagactgaagatgGACAATCAAACAGGAACTCTGACCATCACAAACATCACAACCGAACAGGCTGGactttatatattacagttaaCAAAACAGGCAAAAGCGTTCAGAGTTTCTGTCTATGCTCGTCTGCCGGTTCCTGACATCAGCAGTAACTCTTCAAATTGTTCATCATCGCcgtattgttcattgttgtgTTCAGTGGTGAATGTGAGGCACGcgactctctcctggtacagAGAAAACAGTTTACTGTCCAGAATCACTGCatctgatctcagcatcagtctctctctacatCTGGAGGTGGAACATCAGGATAAAAACagctacagctgtgtgatcaacaatcccatcagaaaccagactcaACATCTGGACATCAGCAGACTCTGTCGCACATGTTCAGGCGCTGAACACTGTTGTGGTGCTACTGAAGCTGTGATCCGATTGGTCCTCTCTGCTCTGGTGGGCGTGGCTACCGTCATTCTTCTGGTTTATGACATCATATCCAGAAGAGCTGAACAGGATCGAGCACATATTCACACATCAGgCGACTCATTTCCTCCCTAGAAGATGATTTGGGAACAAACCTTAGCAAagtgtttcatgaaaaatatttactattacCAAATATTGCTCTGCTAATGCTTGATTATATAGTGCAATAGCATGctt
>XM_043225972.1
ACACCACAGAATCAGAGTAACATCTTAAAGATGTCAGTCTTCAAACTGGAAGAACTTCAGCAGCACTGAACAGTCAATTTCCATTCATACCATTTCATACAAGACTGCTTCCTGATGCTCATTCAACGGCCAAGTTTGCTTCTGATCCTTCATCTGGTGTTATTGAGAGACCCAGTTCATTCGAACCACAGAAATAAAGCCTGAGCCTGAGCTTGCTAAGGAGCTAGAGCTAGCAGATCACATCGATCCCACAATCCTGGCTAGTGTAAGTTTGTTCATATAATTGTCCATATGCAAAACTTTCTAATTGACTGAGAAATGGAGGCAACGCTTCCCAACCTGCCCACCCATGTGTTTGTTGTCACTGATTCCACTCAGCTCAGATTCATTGCCACTAGCAGTCCCATCCAGCACAAAGTGTTCTTCATCGCACCAGTAATGTCCATCAATGAGTCTTCTTTCTCACTCAGTCTTCCATTCCTGTTTGTTCAGCCTCTGCCATAAATCCCTGATGCACCTTGGGGCTTCCAGTCCCCAAGCTCTGCCTTGGTTTGAGGAATCCCAGGGTCTGCCTCGTCCGTTGTGCTTTCAGTTCCATCTCAATGCATCCACCAATTAGCTTCCTAATCACAGGACCATTGTCTTGTCTGTTCCTCTGGGCTCCCTCATCCCTCAGAACTCTTTGCATTGCATCACTCAGTCAAGATTACCCACAGGATGTCACtctcacaaataaaaacatagcgCCATCAACCGTGGTGAAGATAACTACAATCACATACCTACATAACTGCATAAAAAGATTTCTACGTTGCTGTGAAAATCCCAAATGCGATGGAAAGCCAAATGCTGACATGCCTGCGTTCAGAGCACCATCCAGAGAATGACAAGCCTGTTACTGATCCTGCATTAATTTGTTATTGCTAATTTGCCATGCTAATAAAATACAGCTACAACTACAACCAATTTTAAttgtctcagtactatggtatggtggaaatcctcacagatagATTATGTATTGTTATTCAAGTCTGTGCTAATGATAGCTGTCCCctactaagcaagccagaggcaacagtggcaaggaaccaaaaccccatctgtacagaatggagaaaaaaaccttctgagaaaccaggctcagttgggggccAGATCTTCTCTGACCAGACGACCAGcatttaattttcagttcaattttaaatgcagcaatGTCAGATTTTGTAAAGGACTTATTGTGTGTCAATgccatctcttggtgctgatccacaaCCTGATCTAAATGTAGAAAGAGGACTGGAATTGTTGGGAGAGACAGCAATGGAATTTTTTAACTAGTTAGTAAATAGCTAGTAAACAGGAGTTTAAGTATTAGGGGTCAACAGTCCAGAGTAATGGAGAgtgtggggaaaaaagtaaagaagTGAGTGCAGGCAGGTTGAAAATGGGTGGAGAAAAGTGTTGGGAGTTCTATGTGATAGGAAAATATCACAGGTTGAGCAGGATTAGGAACAAGTACATCAGAGGGACATCTCATGTTGGGCGTTTTTGGACATGGAGCTGCCAGGCAGGAGGCAAAGAGAAGGTATATGGATGTAGTGAATGAGGATATGAAGCTAGTGGGTGCAAGTATTGATGCTGACTTGCACCTCTGTACTGAGACACAGATGATACACTGAACATCTGTATTTGGTGTGTAAGAGCATCCGCAGAAagggacattaattaaatttgacATGAATGATAATCAGTAAAACTTAGATGTTGGAGACTCTCTTTCTCCTCGTGACATTACCACCACAGCTCAACTTTTTATGCGTATCAGTGAAATTACTTTTCAATAATTCTGTAGCTCTGGCCcctcttcagtgtttttattcctCTGTGTTTCAGTgacacaaatgtgtgtttgtttcattttaccatgaaattcatctttatttgttaccccggaccacaaaaccataaaaataatatttcgcaatatcactgcttttgctgtattttggatcaaataaatgcaggcttaaCTTCCTTTTTAAAACTGCGCTTTAGTATTTTGCAATTTAACTCATAAGataatgaaatttaaatcaCTAAATACTACTATCATTTacatcaaatattatataaataattctatttaataaacaacaactaTCATAAAAGCTAGTATCATAATTCAGTCAGAAGTATAACGTTTTTACAGAGGGCCGGAATTCATCTGAAAATGTAAGGTCAGCATAATCTTGTTCATCTTCAGGGCTTCCTCTGATTAATCAACCTTTGATGCAGAATCCTGTCGAGAGAGGATTCAACCAGATAGACATCACAGTTCTGGCGTGCTTCAGAGCGTTTTCAGGCATTTTAAGCCCGATTAAGAAAATGTCCCTCATATTAGCGTTGTTCTGTTTGTGGCGTCTGGTTGGTgagtttaaagtgtgtttttatggcTTCTGTCGTGGTATCATGTAATAAATTACTGGATAATTAGTCAGAGAGGAGTAATGTTTATCATCACTATTATTCTACTTTGAGATCACACTTAAATTCAACTCTTTGTTTGATAATTAGGGTTTGACTCAAATATAAAAGTTGTTGTTCAATTAAAACTGTGATCAGTGACAAAACTCTGCTCTTCAGGAGTATTTGCCGTTAAAGGACACACATCAGAGTCAGTGATAGAAGGAGAATCTGTCACCTTCAACTCTCCTTTTGCTCAAATAAAGCAGTTTGATTGGATTCTGTGGCAATTTGAGAAATGCTTGATAGTCGATACCAATGTAACGGCCAGCAGCATGACTGTGTATGACGATGTTCTTGATGGGAGATTCAGAGACCGAGTGAAGCTGGACAATCAAAGCGGATCTCTAACCATCACAAACATCACAACTGAACACGCTGGAGAGTACGTGGTGTCAACCAGCCAGCCGAGGATGATAACATTCGATCTCATTGTCTACGAAGCAGGGAAGTCGGTGTCGGTGACGGAGGGAGATTCGGTCGTTCTAGAATCTGGTGTTACTGAAATAAGTGAAAATGGCATACTGTGGGAGATCGAAAAAGAAAGGTCTTTAAAATCTGGGCTCATCGTCGCATATAAAGGTAATTTGAGGATATcgagagacagactgaagatgGACAATCAAACAGGAACTCTGACCATCACAAACATCACAACCGAACAGGCTGGactttatatattacagttaaCAAAACAGGCAAAAGCGTTCAGAGTTTCTGTCTATGCTCGTCTGCCGGTTCCTGACATCAGCAGTAACTCTTCAAATTGTTCATCATCGCcgtattgttcattgttgtgTTCAGTGGTGAATGTGAGGCACGcgactctctcctggtacagAGAAAACAGTTTACTGTCCAGAATCACTGCatctgatctcagcatcagtctctctctacatCTGGAGGTGGAACATCAGGATAAAAACagctacagctgtgtgatcaacaatcccatcagaaaccagactcaACATCTGGACATCAGCAGACTCTGTCGCACATGTTCAGGCGCTGAACACTGTTGTGGTGCTACTGAAGCTGTGATCCGATTGGTCCTCTCTGCTCTGGTGGGCGTGGCTACCGTCATTCTTCTGGTTTATGACATCATATCCAGAAGAGCTGAACAGGATCGAGCACATATTCACACATCAGGTGTATATATAACTTTgtagtctttatttatttcgaatgcatttaaatattcatattatggagtttatgtttattttataggCGACTCATTTCCTCCCTAGAAGATGATTTGGGAACAAACCTTAGCAAagtgtttcatgaaaaatatttactattacCAAATATTGCTCTGCTAATGCTTGATTATATAGTGCAATAGCATGctt
>XM_043225973.1
ACACCACAGAATCAGAGTAACATCTTAAAGATGTCAGTCTTCAAACTGGAAGAACTTCAGCAGCACTGAACAGTCAATTTCCATTCATACCATTTCATACAAGACTGCTTCCTGATGCTCATTCAACGGCCAAGGAGTATTTGCCGTTAAAGGACACACATCAGAGTCAGTGATAGAAGGAGAATCTGTCACCTTCAACTCTCCTTTTGCTCAAATAAAGCAGTTTGATTGGATTCTGTGGCAATTTGAGAAATGCTTGATAGTCGATACCAATGTAACGGCCAGCAGCATGACTGTGTATGACGATGTTCTTGATGGGAGATTCAGAGACCGAGTGAAGCTGGACAATCAAAGCGGATCTCTAACCATCACAAACATCACAACTGAACACGCTGGAGAGTACGTGGTGTCAACCAGCCAGCCGAGGATGATAACATTCGATCTCATTGTCTACGAAGCAGGGAAGTCGGTGTCGGTGACGGAGGGAGATTCGGTCGTTCTAGAATCTGGTGTTACTGAAATAAGTGAAAATGGCATACTGTGGGAGATCGAAAAAGAAAGGTCTTTAAAATCTGGGCTCATCGTCGCATATAAAGGTAATTTGAGGATATcgagagacagactgaagatgGACAATCAAACAGGAACTCTGACCATCACAAACATCACAACCGAACAGGCTGGactttatatattacagttaaCAAAACAGGCAAAAGCGTTCAGAGTTTCTGTCTATGCTCGTCTGCCGGTTCCTGACATCAGCAGTAACTCTTCAAATTGTTCATCATCGCcgtattgttcattgttgtgTTCAGTGGTGAATGTGAGGCACGcgactctctcctggtacagAGAAAACAGTTTACTGTCCAGAATCACTGCatctgatctcagcatcagtctctctctacatCTGGAGGTGGAACATCAGGATAAAAACagctacagctgtgtgatcaacaatcccatcagaaaccagactcaACATCTGGACATCAGCAGACTCTGTCGCACATGTTCAGGCGCTGAACACTGTTGTGGTGCTACTGAAGCTGTGATCCGATTGGTCCTCTCTGCTCTGGTGGGCGTGGCTACCGTCATTCTTCTGGTTTATGACATCATATCCAGAAGAGCTGAACAGGATCGAGCACATATTCACACATCAGGTGTATATATAACTTTgtagtctttatttatttcgaatgcatttaaatattcatattatggagtttatgtttattttataggCGACTCATTTCCTCCCTAGAAGATGATTTGGGAACAAACCTTAGCAAagtgtttcatgaaaaatatttactattacCAAATATTGCTCTGCTAATGCTTGATTATATAGTGCAATAGCATGctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225970.1 True 4679 mRNA 0.40 5 5282175 5287162
XM_043225972.1 False 3887 mRNA 0.41 5 5282175 5287162
XM_043225973.1 False 1375 mRNA 0.42 5 5282175 5287162

Neighbor

gene id symbol gene type direction distance location
acvr2ba acvr2b,LOC107687130,LOC108436077,LOC100136506 coding downstream 9379 5238446 ~ 5272796 (-)
LOC122329444 exog coding downstream 52390 5218442 ~ 5229785 (-)
wdr48a wdr48,LOC107753054 coding downstream 346351 4920284 ~ 4935824 (-)
slc22a17 slc22a17,LOC107676813,LOC107686828,LOC107554358,LOC107713358 coding downstream 389962 4878308 ~ 4892213 (-)
LOC122329969 smyhc3,LOC107560364,LOC108436073,LOC108271481,LOC108436087,LOC107560365 coding downstream 405029 4864681 ~ 4877146 (-)
LOC122329618 NA coding upstream 3383 5290545 ~ 5294460 (-)
LOC122329619 LOC107557625,LOC107756192,LOC107557627,LOC107573470,LOC107717306,LOC107571437 coding upstream 7499 5294661 ~ 5303028 (-)
xylb xylb coding upstream 23828 5310990 ~ 5347205 (-)
crygn2 crygn2,crygn,LOC107744746,LOC107566923,LOC107653877 coding upstream 75727 5362889 ~ 5366112 (-)
ptprma ptprm,LOC108432749,LOC108271270,LOC106579657 coding upstream 140419 5427581 ~ 5604993 (-)
LOC122329622 NA non-coding downstream 4355 5274956 ~ 5277820 (-)
G161026 NA non-coding downstream 46354 5234921 ~ 5235821 (-)
G161024 NA non-coding downstream 47447 5232587 ~ 5234728 (-)
G161030 NA non-coding downstream 82187 5198658 ~ 5199988 (-)
G161029 NA non-coding downstream 83922 5196576 ~ 5198253 (-)
LOC122329809 NA non-coding upstream 20590 5307752 ~ 5370370 (-)
G161045 NA non-coding upstream 22819 5309981 ~ 5310500 (-)
G161035 NA non-coding upstream 31779 5318941 ~ 5363465 (-)
G161052 NA non-coding upstream 69392 5356554 ~ 5393720 (-)
G161064 NA non-coding upstream 400055 5687217 ~ 5735130 (-)
ttc21a LOC107713329,LOC107554359 other downstream 368673 4897012 ~ 4913502 (-)
LOC122329978 LOC106514910,LOC102208621,LOC108261464,LOC105941235,LOC108229141,LOC107687159,LOC108436088,LOC108436074 other downstream 451448 4829539 ~ 4830727 (-)
G160938 smyhc2,LOC107687159,LOC108271487,LOC108436074,LOC108436088 other downstream 452920 4827249 ~ 4829255 (-)
G160933 NA other downstream 483178 4679859 ~ 4798997 (-)
LOC122329620 LOC107711609,LOC107569850,LOC107554368,LOC107560358,LOC107568663 other upstream 2 5287164 ~ 5290422 (-)
rheb rheb,LOC106579659,LOC107653878,LOC106590380 other upstream 84993 5372155 ~ 5423068 (-)
G161139 NA other upstream 708939 5996101 ~ 5996690 (-)
LOC122329398 fbxl7,LOC107718179,LOC107689422,LOC107589836,LOC107688519,LOC107722558,LOC107585539,LOC107653805,LOC107714010,LOC107566917,LOC107734313,LOC107565690,LOC107655697 other upstream 776437 6063599 ~ 6086816 (-)
LOC122330195 pard3,LOC107713921,LOC107734328,LOC107692754,LOC108431315 other upstream 813582 6100744 ~ 6120917 (-)

Expression


Co-expression Network