rheb (rheb,LOC106579659,LOC107653878,LOC106590380)


Basic Information

Item Value
gene id rheb
gene name rheb,LOC106579659,LOC107653878,LOC106590380
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056722.1
NCBI id CM032091.1
chromosome length 21790128
location 5372155 ~ 5423068 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU238518
TGGGCAGTGACGCAGAGTCTGAGACTTTCCTCgtaatttatcaaaaatattcaCTTCGCTCGGCGGAACGGATTTAATACTTCCCCCCCATAAATCTCCGCGACGCTGAATATCAATACCGAATCAAATCCATGCGATTTCGCTCGCTCCGGACCAGAAGAGCCTCTTGCATGTGGACGTTGATGTGGTAGGGAATAAATAAAGATGCCGCAGCCGAAATCTCGAAAGATCGCCGTCCTGGGCTACAGATCCGTGGGGAAATCCTCCTTGACGATACAGTTTGTGGAAGGCCAGTTTGTCGACTCCTACGACCCCACGATCGAAAACAcatttacgAAAATGATCACGGTGAACGGTCAGGAGTATCACCTGCAGCTGGTGGACACAGCGGGCCAGGACGAATACTCTATTTTCCCACAGACGTACTCCATAGACATCAACGGCTACATCCTGGTGTACTCCGTCCGCGTCAAATAAAAGttttgaagTAGTAAAAGTTATCCATGAAAAGTTGTTGGACATGGTGGGAAAGTACAAGTACCCATAATGCTGGTGGG
>TU238519
TGGGCAGTGACGCAGAGTCTGAGACTTTCCTCgtaatttatcaaaaatattcaCTTCGCTCGGCGGAACGGATTTAATACTTCCCCCCCATAAATCTCCGCGACGCTGAATATCAATACCGAATCAAATCCATGCGATTTCGCTCGCTCCGGACCAGAAGAGCCTCTTGCATGTGGACGTTGATGTGGTAGGGAATAAATAAAGATGCCGCAGCCGAAATCTCGAAAGATCGCCGTCCTGGGCTACAGATCCGTGGGGAAATCCTCCTTGACGATACAGTTTGTGGAAGGCCAGTTTGTCGACTCCTACGACCCCACGATCGAAAACAcatttacgAAAATGATCACGGTGAACGGTCAGGAGTATCACCTGCAGCTGGTGGACACAGCGGGCCAGGACGAATACTCTATTTTCCCACAGACGTACTCCATAGACATCAACGGCTACATCCTGGTGTACTCCGTCCGCGTCAAATAAAAGttttgaagTAGTAAAAGTTATCCATGAAAAGTTGTTGGACATGGTGGGAAAGTACAAGTACCCATAATGCTGGTGGG
>XM_043226404.1
GGCCAATCCGGAGCGCGCGTTCTTGCATAATTAACGCAGGCTTGCGGTGGGCAGTGACGCAGAGTCTGAGACTTTCCTCgtaatttatcaaaaatattcaCTTCGCTCGGCGGAACGGATTTAATACTTCCCCCCCATAAATCTCCGCGACGCTGAATATCAATACCGAATCAAATCCATGCGATTTCGCTCGCTCCGGACCAGAAGAGCCTCTTGCATGTGGACGTTGATGTGGTAGGGAATAAATAAAGATGCCGCAGCCGAAATCTCGAAAGATCGCCGTCCTGGGCTACAGATCCGTGGGGAAATCCTCCTTGACGATACAGTTTGTGGAAGGCCAGTTTGTCGACTCCTACGACCCCACGATCGAAAACAGTAAcatttacacGAAAATGATCACGGTGAACGGTCAGGAGTATCACCTGCAGCTGGTGGACACAGCGGCTCAGGACGAATACTCTATTTTCCCACAGACGTACTCCATAGACATCAACGGCTACATCCTGGTGTACTCCGTCACGTCAAATAAAAGttttgaagTAGTAAAAGTTATCCATGAAAAGTTGTTGGACATGGTGGGGAAAGTACAAGTACCCATAATGCTGGTGGGCAATAAGAAAGACCTTCACATGGAACGtGTGATCAGCTGTGAAGAAGGAAAAGCTTTGGCAGAATCCTGGAACGCAGCGTTCATGGAGTCTTCAGCCAAAGAGAACCAGaCGGCCGTGGAGGTGTTTAAGAGGATAATCCTGGAGGCGGAGAAGATGGACGGCGGCGCTCCTCAGGGCCGGACACCCTGCTCTATGATGTAGATAACCCCGCCCTCCCCAccctgaccccgcccctctccCACAGTCCGCCCCGCCATCGGAGAACCAGCACAAACTTTTCTAGCAAGCATGTTTTGTCAGTTTGAGGCTGGAGTTTGGGCTTGGCTCGTGTTTTAGGTTGAAGGGCTTGGAAGAGCCCGATCTGGAGATGTTTGCTAGAAAAGTCTGTCCCAGCCCCGCAGCACTGGACACTGGGAAACGATCCCTCTACTTGAAGTGGCTAACTGCCTGTTTCCTGCATAGACATGTCggctttttcttttaaaccttttttatacttcatttgacttgacatttttttagttgtgtgacattttcttttatttattcctttgtgAGACAGAACCTGTCCgtgagtaacacacacacacacacacacactcttcagcCTTACGTTTGCGTTTCGCTCTTCTCTACCTCtcatcttcctctctctgtcccCGAACCCTCTGGACTTTGTATATCGTGTTTCTTAAACGGTAATTATGGCCAATAAAGTGGGCAGCATTCATTGAGTGGTGAATGTTGTTGAACTTTTTTGATTGTAATCATTAAACGCAGCATTTTCTTTCACTA

Function

symbol description
rheb Predicted to enable GDP binding activity; GTP binding activity; and GTPase activity. Predicted to be involved in small GTPase mediated signal transduction. Predicted to act upstream of or within positive regulation of TOR signaling and signal transduction. Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human RHEB (Ras homolog, mTORC1 binding).

NR:

description
PREDICTED: GTP-binding protein Rheb

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0016020 membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K07208 RHEB; Ras homolog enriched in brain

RNA

RNA id representative length rna type GC content exon number start site end site
TU238518 False 557 TUCP 0.48 6 5372155 5423021
TU238519 False 557 TUCP 0.48 6 5372155 5423021
XM_043226404.1 True 1406 mRNA 0.48 8 5409669 5423068

Neighbor

gene id symbol gene type direction distance location
crygn2 crygn2,crygn,LOC107744746,LOC107566923,LOC107653877 coding downstream 6043 5362889 ~ 5366112 (-)
xylb xylb coding downstream 24950 5310990 ~ 5347205 (-)
LOC122329619 LOC107557625,LOC107756192,LOC107557627,LOC107573470,LOC107717306,LOC107571437 coding downstream 69127 5294661 ~ 5303028 (-)
LOC122329618 NA coding downstream 77695 5290545 ~ 5294460 (-)
LOC122329621 NA coding downstream 84993 5282175 ~ 5287162 (-)
ptprma ptprm,LOC108432749,LOC108271270,LOC106579657 coding upstream 4513 5427581 ~ 5604993 (-)
lrrc30a lrrc30,lrrc30a,LOC107562767,LOC107566924,LOC107743992,LOC107579084,LOC107566920 coding upstream 190743 5613811 ~ 5615968 (-)
arhgap28 LOC107747481,LOC107653873,LOC107698695,LOC107559389,LOC107728987,LOC107570873 coding upstream 248311 5671379 ~ 5692871 (-)
vapa LOC107698706,LOC107728995,LOC107653890,LOC107729949 coding upstream 423465 5846533 ~ 5852263 (-)
twsg1b LOC107572616,LOC106579643,LOC108432738,LOC103038715,LOC105025733 coding upstream 441449 5864517 ~ 5870090 (-)
LOC122329809 NA non-coding downstream 1785 5307752 ~ 5370370 (-)
G161035 NA non-coding downstream 8690 5318941 ~ 5363465 (-)
G161045 NA non-coding downstream 61655 5309981 ~ 5310500 (-)
LOC122329622 NA non-coding downstream 94335 5274956 ~ 5277820 (-)
G161026 NA non-coding downstream 136334 5234921 ~ 5235821 (-)
G161064 NA non-coding upstream 264149 5687217 ~ 5735130 (-)
G161076 epb41l3,LOC107728994,LOC107698703,LOC108432756 non-coding upstream 267517 5690585 ~ 5808643 (-)
G161067 NA non-coding upstream 278073 5701141 ~ 5704827 (-)
G161068 NA non-coding upstream 282699 5705767 ~ 5706498 (-)
G161088 NA non-coding upstream 304491 5727559 ~ 5728615 (-)
LOC122329620 LOC107711609,LOC107569850,LOC107554368,LOC107560358,LOC107568663 other downstream 81733 5287164 ~ 5290422 (-)
ttc21a LOC107713329,LOC107554359 other downstream 458653 4897012 ~ 4913502 (-)
LOC122329978 LOC106514910,LOC102208621,LOC108261464,LOC105941235,LOC108229141,LOC107687159,LOC108436088,LOC108436074 other downstream 541428 4829539 ~ 4830727 (-)
G160938 smyhc2,LOC107687159,LOC108271487,LOC108436074,LOC108436088 other downstream 542900 4827249 ~ 4829255 (-)
G160933 NA other downstream 573158 4679859 ~ 4798997 (-)
G161139 NA other upstream 573033 5996101 ~ 5996690 (-)
LOC122329398 fbxl7,LOC107718179,LOC107689422,LOC107589836,LOC107688519,LOC107722558,LOC107585539,LOC107653805,LOC107714010,LOC107566917,LOC107734313,LOC107565690,LOC107655697 other upstream 640531 6063599 ~ 6086816 (-)
LOC122330195 pard3,LOC107713921,LOC107734328,LOC107692754,LOC108431315 other upstream 677676 6100744 ~ 6120917 (-)
G161224 lancl2,LOC107561957,LOC107693471,LOC107566172,LOC107655705 other upstream 973103 6396171 ~ 6470101 (-)
G161327 LOC107713878 other upstream 1522118 6945186 ~ 7005408 (-)

Expression


Co-expression Network