CI01000003_01836259_01849326 (GPT2L, ALAT2)


Basic Information

Item Value
gene id CI01000003_01836259_01849326
gene name GPT2L, ALAT2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 1836200 ~ 1849326 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000003_01836259_01849326.mRNA
ATGGGAGGAGCTGACGTGTTTTATTCTCAGTTACTGGATCAATGGGAGGAGGTTCACTCACTGTGTAGGGAAGTTTTACACAGGGGTCTTTCTGCTTTCCCGGCGGCCCAAAGCGACCATCTACAGCAGAAGATGTCCGAAAACGGTGCGTTACCCCATCGGGGGAAAGTGCTCACCGTTGACACCATGAACGCCAACGTGAAGAAGGTTGACTACGCGGTCCGCGGACCTATAGTTCAGCGAGCAGTGCAGATTGAGAAGGAACTGAAAGAGGGTGTCAAGAAGCCTTTTAAAGAGGTCATTAAAGCCAATATCGGGGATGCTCACGCTATGGGGCAACGGCCAATCACCTTCTTTCGACAGGTGATGGCACTGTGTACTTATCCACAACTACTTGATGACAACAAGTTTCCAGAGGATGCCAAAAACCGAGCGAGGCGTATTTTGCAAGCATGTGGAGGGAATAGCATCGGTGCATACACAACTAGTCAGGGCATTGACTGTATAAGGCATGATGTTGCAAACTACATACAGCGCCGTGACGGCGGTATTCCGTCTGATCCTGATAACATCTACCTCACAACAGGAGCCAGTGACGGCATTGTGACCATACTGAAGTTGCTGACAGCTGGAGAGGGTCGTACACGGACGGGGGTCATGATCTCTATTCCTCAGTATCCTCTGTACTCTGCATCTATAGCAGAGTTGGGTGCTGTTCAGGTGAATTATTACTTGAATGAGGAAAAGTGCTGGAGTCTAGACATTAGTGAGCTACAGCGCTCTCTACAGGCAGCTAGAGAGCATTGCAACCCCCGTGTACTGTGCATCATCAACCCCGGCAACCCCACTGCCAAAGAAAACCTCTTCCTAATGGCTGATGAAGTGTATCAGGACAATGTATACGCAGAGGGCTGCGAGTTTCACTCCTTCAAGAAGGTGCTTTTCGAGATGGGTCCAGAGTATTCAAGAAAAGTAGAGCTGGCGTCGTTCCATTCCACCTCTAAGTGTTACATGGGAGAATGTGGTTTCCGAGGGGGATACATGGAGGTCATCAACATGGACCCAGAGGTTAAAGCTCAGCTCACCAAGCTGGTGTCAGTGCGCTTGTGCCCACCTGCGCCTGGACAAGCCCTCATGGACCTGGTGGTCAACTCCCCTCAGCCCGGAGAACCCTCCTATCAGTCGTTCATTAAGGAGCGAACAGCCGTTCTGAGTGCCTTGGCTGAAAAAGCCAAACTGACCGAAGAGATTCTGAATACAGTGCCAGGCATCAGCTGTAACCCTGTGCAGGGAGCAATGTACTCCTTCCCCCGTATCACCATACCTGAACGTGCCATCAACGAAGCCAAGGCGAAGGGTCAGGCTCCAGACATGTTCTACTGCATGAAACTTCTGGAGGATACCGGGATCTGCCTCGTTCCTGGCAGTGGTTTTGGTCAAAGAGATGGCACTTACCACTTCAGGATGACCATCCTTCCTCCAACAGACAAACTAAAGATTATGCTCCACAAACTGAAGGAATTCCATCAGACATTCACCCAGCAGTACGCTTGACCCCAGTTCAATCACAGCTATACTACCACAACCCCACTGACTAAAAGTGCTACAGTAAA

Function

GO:

id name namespace
GO:0008483 transaminase activity molecular_function

KEGG:

id description
K00814 GPT, ALT; alanine transaminase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000003_01836259_01849326.mRNA True 1613 mRNA 0.50 12 1836200 1849326

Neighbor

gene id symbol gene type direction distance location
CI01000003_01807697_01809455 C1QL3, C1QL3B coding downstream 26745 1807130 ~ 1809455 (-)
CI01000003_01632757_01671893 EGFRA coding downstream 164307 1630607 ~ 1671893 (-)
CI01000003_01601113_01624224 NA coding downstream 211976 1600965 ~ 1624224 (-)
CI01000003_01424386_01424816 NA coding downstream 411285 1424350 ~ 1424915 (-)
CI01000003_01368353_01374263 YME1L1B, YME1L1 coding downstream 461937 1368353 ~ 1374263 (-)
CI01000003_01856167_01857447 FUZ coding upstream 5515 1854126 ~ 1857447 (-)
CI01000003_01870680_01887249 NA coding upstream 21019 1870345 ~ 1887255 (-)
CI01000003_01931888_01950409 DNAJB4 coding upstream 81694 1931020 ~ 1950496 (-)
CI01000003_02091233_02092464 NA coding upstream 241758 2091084 ~ 2092685 (-)
CI01000003_02221239_02254635 PIGK, PIGK.S coding upstream 371872 2221198 ~ 2254635 (-)
G23657 NA non-coding downstream 32266 1803563 ~ 1803934 (-)
G23652 NA non-coding downstream 45419 1790370 ~ 1790781 (-)
G23639 NA non-coding downstream 46270 1789437 ~ 1789930 (-)
G23582 NA non-coding downstream 266304 1552659 ~ 1569896 (-)
G23577 NA non-coding downstream 292642 1543335 ~ 1543558 (-)
G23628 NA non-coding upstream 10591 1859917 ~ 1863447 (-)
G23644 NA non-coding upstream 15272 1864598 ~ 1866129 (-)
G23675 NA non-coding upstream 66176 1915502 ~ 1915724 (-)
G23694 NA non-coding upstream 120214 1969540 ~ 1975388 (-)
G22716 NA other downstream 1766456 50512 ~ 69744 (-)

Expression


Co-expression Network