G23694


Basic Information

Item Value
gene id G23694
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 1969540 ~ 1975388 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU26738
TCATGTATGATAAACATGTTTATTTAACCATGATACAGGAATGTTTGTAGAGCATTTGGGCATGTCAAAATGAGTTTTTGTTTAAAGGCATTAAAAAAAAAAAAAAAGGAGAAATAACATTGTGTTGCATTGTAGGAGACATAAATAGAAACCGTATACTTCTTTCAGGCGCTGGGGGCGTACTGCATGGCAAGTCTGTCAAATTCATCCCACTTATTCTGAGCCATGTGACTGGCAGCCTGACCGTTCAGCAGCAGCAGTGTGGGCGAGTACTTGTCTGACATTTCCTGGAAGATGTAGAACGCATCCTGCAATTTCTCTCCCCCCTGTTGGGTACGTAACGCAGCATCTGTGTTCATCTCATGCAGATAGATGGAAGCCGCCATCAGCAGGAAGGTGGTGTTGGAAACATCAACACTCTTAGCCATCTTTTTGTCCAATTCTGCCACTATTGCATCTCTCTTGCCTTCATTGGACAGGTACTCGGCAAACATCCTAACAGCCTGCAGCTCCTCAGAGGAGCTGGGCTTTATTTCATCCAGAACCACAGCATACTTCCTCTGAGCAATGTATGCTCTGTACAGAAAAATGTTCTTCTCTGCATCCTTTTCTGGCCCTGATGTCTTTACTTTTTGGGCTTCGTTAATGCAGTGTTGATAACTGCCAATGTAAAAAGCGTTTTTCACATCGAATAGCTCATCCACTTCACTCTGCTGCGACGCCATGTTT
>TU26739
AAGAATGCAGATGATGATTTTATTTTATTTATTTTTTTTTTATGTTAACATGTTAATTAGGGATGCACCGAATGTTCAGCAACCAAAACTATTCGGCTGAAAATAGCAAAAATATAGTGTAAAAAAAAAAGTGAAAAGATAGAATAAATTTTACAGAACAATGATGTTTTTGATGAAGCAATCAAATAGCAAACAGTGTAGAGTGAGAGGCGCGCACGCTTTACAAAATTCAGCAAACATGTCAGCAGTGTGGAAGCAAAGTGTCCGAAAAAGACACAAAAATGGCCAGTTGCAGACACTGTTTTGCTAAATTGTATAGAGCAGTGGTTCCCAAACTGGGGTGTCAGAGGGGGAACACAAACAAAATGCTGAGTTTTGCCCTTCATTTAATTCTGCTCCCCTTTAAAATAACATTAAAACCAAGCATGTACTTCTAATAGGCAAAATGCCACCTCTAGTGTAAAAACAACAGGAAAATGGGAGTGCCGTAATATGTCAAATACATGAAATCCAATGAAATTACCTCATCTTTTGTAATCAAAACTGACTACCATCCACTAAAGCAGCATGCATCTGATAGGTTGCGTGCAGAGTCTGCTACCTTAGCAAACAGTGGTACATTACTGCAGTTCTCGACAATGTACCTTTGTAAAAGTGACGTTTTAGCACTTACTAGCATGAAGAACAAATATAGACACTGACTGTGCATAGAGATCGATTTAAGACTCAAACTCTATTTGATACAAAAACATACCCTGTACGACGACTTATTTTTAATGTTGATAATATATTATACAAAAAAGAATGCCATTCTCCCATATATCCACGATTGCAAATGTGACATTGATTTTTTTACATTTCAACAAACAAAAAGGTGATATTAAGAGATGTACATTTTAAACAGTATTGTTGTTTGCTCTATTTTGCAGTGAAACAATAGTTCCACCGAAAGCCACAGCAGAACTGTTGTGCATCTCCAAGCAACACACAGCAGCAATGATTAATGGTCCATTGATAATACAGCCAGTCTTGCATTGTTAATGAATGAATAAATAAATGACTCACTCGTTAAGACAGTACCTTGCCGCCAGTAGTTTTTAGTTTAGTTTAATATTTAAAAGTAGGCCAATCACTTTGTTTTTACCGTCATTTCGTATTTCTCTATTGAACATTTTTTATTTAAAACATTATCTCATAACATTATTTATGCCACTGTAATTGCATTCATACCACCTCTGAGCAATATTAAACGATGTGTAAATGCATTTAGATTGTCCAATGTGCCACTGCAGGGCAAATATGGCTTTTGTTGATTTAATTTGATTGAAACTGTTGATTTAGTTTAATTTATTGATTTATTATATTAATAATGAAATTAATGGAATTTGACATAAAAATGTCAAAATGTAAAGACAAAAAATGCACCTGAATATCAATTTAAAGGGGCAAATATTGTCCAGTCTAAGTGGAAGAGAGAGGATACGAAGGAGGATATTAAATGCCTCTAAAAAGTTTGAGAACCACTGGTCTAGAGGGGGCGCATCTGCAAAAACTTACAGCAGAAATAAACTTATTTAAATATTTTTAAATTGATTTTTTCTTTGAAAAGCACATTTTGACTATTTAATTTATGCAATGATGAAAAAACGGTCAAAATAAATGGCCTTCAACCAAGTGTTTCATTATATTCGGTTTCAGCTTCGGCCAAGATTTTTAATTTCGGTGCATCCCTAATGTTAATTTATGGAGTTTACCTCAGGAGGTTTGCCCAAATGCTGTGTCAACACAATGAGGTTGATGAGTGTCTCCGGGTGGCTCTTACTTTGTCCAGAGCATCCTGTAGTACTGACTCTGCCTCATCCCACTTATTCTGAGCCATGTGACTGGCAGCCTGACCGTTCAGCAGCAGCAGTGTGGGCGAGTACTTGTCTGACATTTCCTGGAAGATGTAGAACGCATCCTGCAATTTCTCTCCCCCGATGGCAAGGTTGACCCAGGCTGTAGCAAGCTGAGTCAAAGTGGAGTCTTCATCTTGGTCTTGCATCTTCTTTAGCTCCTTTCTTGCCATATCAACTCTGTCCAACTTGAGAAGTATCTGGACAGTCATGGCCATGCACTCCAGACTCTCTCCCTGGTGCAGGGTACGTAACGCAGCATCTGTGTTCATCTCATGCAGATAGATGGAAGCCGCCATCAGCAGGAAGGTGGTGTTGGAAACATCAACACTCTTAGCCATCTTTTTGTCCAATTCTGCCACTATTGCATCTCTCTTGCCTTCATTGGACAGGTACTCGGCAAACATCCTAACAGCCTGCAGCTCCTCAGAGGAGCTGGGCTTTATTTCATCCAGAACCACAGCATACTTCCTCTGAGCAATGTATGCTCTGTACAGAAAAATGTTCTTCTCTGCATCCTTTTCTGGCCCTGATGTCTTTACTTTTTGGGCTTCGTTAATGCAGTGTTGATAACTGCCAATGTAAAAAGCGTTTTTCACATCGAATAGCTCATCCACTTCACTCTGCTGCGACGCCATGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26738 False 729 lncRNA 0.39 6 1969540 1975388
TU26739 True 2537 lncRNA 0.38 8 1969540 1974888

Neighbor

gene id symbol gene type direction distance location
CI01000003_01931888_01950409 DNAJB4 coding downstream 19044 1931020 ~ 1950496 (-)
CI01000003_01870680_01887249 NA coding downstream 82285 1870345 ~ 1887255 (-)
CI01000003_01856167_01857447 FUZ coding downstream 112093 1854126 ~ 1857447 (-)
CI01000003_01836259_01849326 GPT2L, ALAT2 coding downstream 120214 1836200 ~ 1849326 (-)
CI01000003_01807697_01809455 C1QL3, C1QL3B coding downstream 160085 1807130 ~ 1809455 (-)
CI01000003_02091233_02092464 NA coding upstream 115696 2091084 ~ 2092685 (-)
CI01000003_02221239_02254635 PIGK, PIGK.S coding upstream 245810 2221198 ~ 2254635 (-)
CI01000003_02353398_02370544 ZZZ3 coding upstream 378010 2353398 ~ 2370544 (-)
CI01000003_02385930_02406911 USP33 coding upstream 410379 2385767 ~ 2406911 (-)
CI01000003_02449147_02456088 FUBP1 coding upstream 473247 2448635 ~ 2456088 (-)
G23675 NA non-coding downstream 53816 1915502 ~ 1915724 (-)
G23644 NA non-coding downstream 103411 1864598 ~ 1866129 (-)
G23628 NA non-coding downstream 106093 1859917 ~ 1863447 (-)
G23657 NA non-coding downstream 165606 1803563 ~ 1803934 (-)
G23696 NA non-coding upstream 140142 2115530 ~ 2116646 (-)
G23755 NA non-coding upstream 142765 2118153 ~ 2118519 (-)
G23756 NA non-coding upstream 145070 2120458 ~ 2120671 (-)
G23757 NA non-coding upstream 147405 2122793 ~ 2123064 (-)
G23759 NA non-coding upstream 150435 2125823 ~ 2126095 (-)
G22716 NA other downstream 1899796 50512 ~ 69744 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G228947 LOC103152567,LOC106913527,LOC106945279,LOC106922717,LOC102300237 non-coding NC_053134.1 CM020931.1 19877097 ~ 19882079 (-)