CI01000003_01807697_01809455 (C1QL3, C1QL3B)


Basic Information

Item Value
gene id CI01000003_01807697_01809455
gene name C1QL3, C1QL3B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 1807130 ~ 1809455 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000003_01807697_01809455.mRNA
AGGTCCGTTCAGGTGACGTTTACATCAGTTCAGGGATTATATAACGTCTTCATTGCAAAAGTTAACGGACTTTCTCTGGAGCAGCAGGGAAGTTTAATTTTTGATTTTGGCATCGCTTCTGCGCCTAGCAAGATTGCGCATAAATCGCAGCGCGAGGCGCGCCCGGTGCTGTCGAGACTGGGCGTCAGAGCGCGGGTGATCGCCACGGGCGTGCTGGGTGTTGTCATGGTGCTGGTGCTGGTGATTCTCATCCCGGTGATGGTCAGCGCGGCAGGATCCGACGCGCGCTACGAGATGCTCGGCGCGTGCCGCATGGTGTGCGATCCGTACGGAACAAAGTCTCCATCACCAGAACCGGCGGACAACCGCTTAGTTCAGTCCCCACCAACTTTCATCCGCGGTCCTAAAGGAGAGTCAGGGCGCTCAGGAAGGATCGGTCCGAGGGGTCAGCCGGGTCCGCCCGGACCTCAAGGTCCCCCGGGGGTCATAGGAGAACCAGGGCCACCTGGATTACCCGGTCCGCCCGGAGTCACCGGTGTCATAAGCGCAGCAACGTACAGCACCGTTCCCAAAATCGCCTTCTACGCAGGACTCAAGAAGCAACACGAAGGCTACGAGGTGCTGAAGTTTGATGATGTGGTCACTAACTTGGGCAACCACTATGACCCCTCGAGTGGTAAATTCACCTGCTCCATCCCTGGGATCTACTTTTTCGTGTATCACGTATTAATGAGAGGTGGTGACGGGACCAGCATGTGGGCTGATCTGTGCAAGAATAATCAGGTGCGTGCGAGTGCAATAGCGCAGGATGCAGATCAGAACTACGACTATGCCAGCAACAGTGTGATATTACACCTGGAGCCCGGAGATGAGATCTACATTAAACTAGATGGAGGCAAAGCGCACGGGGGAAACAACAACAAATACAGCACGTTTTCAGGCTTCATGGTCTACGCCGATTAACGCCTGTGGCATAGACTGCACTTTCAGATGTACCTCATTTTGACGTCACAGCGTAATCAGAGTGAGGTCACAAAAAGTTTAATGCTTAAGCTTGTGACATCTCATCCACGTCAGAGTGAAGGATAAGCAACAGATCGTCCAGTTGAGAACTGGAACTACTGAATGATCATAGCATCTCGAAGCATGTGAACACCCTCTACACGCAAATTAGTTTTTAGAGAAATCACTGTGATTTAGAAAAAAAAAATCTTACAGTGTAACACTGATGATTGTAGTATATTTATTGAGAGATTAAACAGCAGTGAAAGCAGAAAATCGTTGACATCATTCCATTCCATACGTGCCTATTGAAACTGACACATGGCTGATCTGAAGAGGCTGTTACAGAGCACCCGCCATTAGCCCGGAAACATAGTTGAGATGACATTTCTTTAATAGTTTCTCATTCTTCACACACACAATGTCACATTTAAACCACAATTCTGTACTGTTTTATATCAATGTTTTCATTTAAAAATATTATCACTGTCTGGTATGTGCAGTGTCTTTGAACAAATTGTGAATAAA

Function

symbol description
c1ql3b Predicted to be located in extracellular region and membrane. Predicted to be integral component of membrane. Orthologous to human C1QL3 (complement C1q like 3).
c1ql3 Predicted to enable identical protein binding activity. Predicted to act upstream of or within regulation of synapse organization. Predicted to be located in extracellular region. Predicted to be part of collagen trimer.

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000003_01807697_01809455.mRNA True 1530 mRNA 0.48 2 1807130 1809455

Neighbor

gene id symbol gene type direction distance location
CI01000003_01632757_01671893 EGFRA coding downstream 135237 1630607 ~ 1671893 (-)
CI01000003_01601113_01624224 NA coding downstream 182906 1600965 ~ 1624224 (-)
CI01000003_01424386_01424816 NA coding downstream 382215 1424350 ~ 1424915 (-)
CI01000003_01368353_01374263 YME1L1B, YME1L1 coding downstream 432867 1368353 ~ 1374263 (-)
CI01000003_01348419_01352984 RAB18B, RAB18, RAB18A coding downstream 454146 1346599 ~ 1352984 (-)
CI01000003_01836259_01849326 GPT2L, ALAT2 coding upstream 26745 1836200 ~ 1849326 (-)
CI01000003_01856167_01857447 FUZ coding upstream 45386 1854126 ~ 1857447 (-)
CI01000003_01870680_01887249 NA coding upstream 60890 1870345 ~ 1887255 (-)
CI01000003_01931888_01950409 DNAJB4 coding upstream 121565 1931020 ~ 1950496 (-)
CI01000003_02091233_02092464 NA coding upstream 281629 2091084 ~ 2092685 (-)
G23657 NA non-coding downstream 3196 1803563 ~ 1803934 (-)
G23652 NA non-coding downstream 16349 1790370 ~ 1790781 (-)
G23639 NA non-coding downstream 17200 1789437 ~ 1789930 (-)
G23582 NA non-coding downstream 237234 1552659 ~ 1569896 (-)
G23577 NA non-coding downstream 263572 1543335 ~ 1543558 (-)
G23628 NA non-coding upstream 50462 1859917 ~ 1863447 (-)
G23644 NA non-coding upstream 55143 1864598 ~ 1866129 (-)
G23675 NA non-coding upstream 106047 1915502 ~ 1915724 (-)
G23694 NA non-coding upstream 160085 1969540 ~ 1975388 (-)
G22716 NA other downstream 1737386 50512 ~ 69744 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015154 c1ql3b coding NC_007113.7 CM002886.2 3595333 ~ 3597975 (+)